Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400070889
CDS Infomation

pacid=37473550 polypeptide=PGSC0003DMP400047936 locus=PGSC0003DMG400027563 ID=PGSC0003DMT400070889.v4.03 annot-version=v4.03
Sequence

ATGACGCTGAAAACGAGCTGTTGTGGTATTTGTGAGAATTCAAATCTACCTTCCGTTTGT
ACTCTTTGCGTCAATTACAGATTGAATGAGTACAGCACTGTGTTGAAATCACTGAAGGGA
AGGAGAGAAGCATTATGTGGGAAATTAAGTGAAATACTCTTGGCTAAGGGCAAGGCCGAC
GATCAACTTAGTTGGAGGGTGCCTCGGAATGAAAAATTGGCAAGATTAAGGGAAAAACTC
CGACAGCAGAAAGAGCAAATTTCACAAGGGAAGGCGAAAATTGAGAAGATGTCTCATGAT
CTGAAAGTTCAGTATGAGTTGCTAGGATCAGCTACAAGGATGCTGGAAAAAAATCGTGCG
GAACAACTTGAGAAGTTTTATCCTAATCTCATCTGCACTCAAAATCTTGGGCATATGGCA
ATTACCTCTGAGCTTCTTCATAAACAGTCTGTGGTTGTAAAACAGATTTGCAAGTTATTC
CCTCAACGTCGTGTAACAATTGATGGAGACAAAAAAGATGGATCTAGTGGCCAATATGAT
AGCATCTGTAATGCAAGGTTGCCAAAAGGACTTGATCCTCACTCAGTTCCATCTGACGAG
CTGAGTGCTTCTTTAGGATATATGGTGCAACTTTTGAACCTCGTTATTCGTTGCGTCTGT
GCTCCTGCACTTCATAATTCAGGATTTGCGGGTTCATGTTCTCGAATATGGCAACGAGAT
TCTTACTGGGATGCCCGTCCGTCGTCTAGAAGTGGCGAGTACCCACTTTTTATCCCGCGC
CAAAACTTTTGCTCTTCAGGTGGGGAGGCTTCATGGTACGACAGAAGTTGCAGTAATTCT
GGAACTTCTAGTAACTTTGGAGTTACCTCGATGGAATCTGATAGAAAACCTCGGTTGGAT
TCTTCTAGTAGTAGCAGTTTCAACTATGCTTCTGCTTCCCTGCACTCAATAGAAACACAC
AAGGATCTGCAGAAAGGCATAGCACTTCTCAAGAAAAGTGTTGCTTGCATTACTGCATAC
TGTTACAACACATTATGTTTAGAAGTTCCTGCTGAAGCCTCTACCTTCGAAACATTTGCA
AGATTGTTGGCTACACTTTCTTCTTCAAAGGAAGTTCGGTCTGTTTTTTCTTTGAAAATG
TCTGGTTCAAGGGCATCCAAGCAAGTCCAACCACTGAACAAATCTGTTTGGAATGTAGAT
TCAGCCGGATCATCTAGCACTTTGATGGAGAGTGGACATGTGCCAGTATTGAGAAATACA
TTTGAAAATGCTCTTCCAAGTTCTAGTGGCAATTTAATTTATGCCACTGAAGTATCTGAT
GCAAGAAGGAATGAAAATTTAATTGAAGACTGGGATCTTATTGAGCACCCTCCTTTTCCT
CCTCCTCCATCACATACAGAAGATGTTGAACATTGGACCCGAGCCATGTTTATTGATGCA
ACAAAGAAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400047936
PEP Infomation

pacid=37473550 transcript=PGSC0003DMT400070889 locus=PGSC0003DMG400027563 ID=PGSC0003DMT400070889.v4.03 annot-version=v4.03
Sequence

MTLKTSCCGICENSNLPSVCTLCVNYRLNEYSTVLKSLKGRREALCGKLSEILLAKGKAD
DQLSWRVPRNEKLARLREKLRQQKEQISQGKAKIEKMSHDLKVQYELLGSATRMLEKNRA
EQLEKFYPNLICTQNLGHMAITSELLHKQSVVVKQICKLFPQRRVTIDGDKKDGSSGQYD
SICNARLPKGLDPHSVPSDELSASLGYMVQLLNLVIRCVCAPALHNSGFAGSCSRIWQRD
SYWDARPSSRSGEYPLFIPRQNFCSSGGEASWYDRSCSNSGTSSNFGVTSMESDRKPRLD
SSSSSSFNYASASLHSIETHKDLQKGIALLKKSVACITAYCYNTLCLEVPAEASTFETFA
RLLATLSSSKEVRSVFSLKMSGSRASKQVQPLNKSVWNVDSAGSSSTLMESGHVPVLRNT
FENALPSSSGNLIYATEVSDARRNENLIEDWDLIEHPPFPPPPSHTEDVEHWTRAMFIDA
TKK*

Transcript Sequence

Transcript ID

PGSC0003DMT400070889
Transcript Infomation

pacid=37473550 locus=PGSC0003DMG400027563 ID=PGSC0003DMT400070889.v4.03 annot-version=v4.03
Sequence

ATGACGCTGAAAACGAGCTGTTGTGGTATTTGTGAGAATTCAAATCTACCTTCCGTTTGT
ACTCTTTGCGTCAATTACAGATTGAATGAGTACAGCACTGTGTTGAAATCACTGAAGGGA
AGGAGAGAAGCATTATGTGGGAAATTAAGTGAAATACTCTTGGCTAAGGGCAAGGCCGAC
GATCAACTTAGTTGGAGGGTGCCTCGGAATGAAAAATTGGCAAGATTAAGGGAAAAACTC
CGACAGCAGAAAGAGCAAATTTCACAAGGGAAGGCGAAAATTGAGAAGATGTCTCATGAT
CTGAAAGTTCAGTATGAGTTGCTAGGATCAGCTACAAGGATGCTGGAAAAAAATCGTGCG
GAACAACTTGAGAAGTTTTATCCTAATCTCATCTGCACTCAAAATCTTGGGCATATGGCA
ATTACCTCTGAGCTTCTTCATAAACAGTCTGTGGTTGTAAAACAGATTTGCAAGTTATTC
CCTCAACGTCGTGTAACAATTGATGGAGACAAAAAAGATGGATCTAGTGGCCAATATGAT
AGCATCTGTAATGCAAGGTTGCCAAAAGGACTTGATCCTCACTCAGTTCCATCTGACGAG
CTGAGTGCTTCTTTAGGATATATGGTGCAACTTTTGAACCTCGTTATTCGTTGCGTCTGT
GCTCCTGCACTTCATAATTCAGGATTTGCGGGTTCATGTTCTCGAATATGGCAACGAGAT
TCTTACTGGGATGCCCGTCCGTCGTCTAGAAGTGGCGAGTACCCACTTTTTATCCCGCGC
CAAAACTTTTGCTCTTCAGGTGGGGAGGCTTCATGGTACGACAGAAGTTGCAGTAATTCT
GGAACTTCTAGTAACTTTGGAGTTACCTCGATGGAATCTGATAGAAAACCTCGGTTGGAT
TCTTCTAGTAGTAGCAGTTTCAACTATGCTTCTGCTTCCCTGCACTCAATAGAAACACAC
AAGGATCTGCAGAAAGGCATAGCACTTCTCAAGAAAAGTGTTGCTTGCATTACTGCATAC
TGTTACAACACATTATGTTTAGAAGTTCCTGCTGAAGCCTCTACCTTCGAAACATTTGCA
AGATTGTTGGCTACACTTTCTTCTTCAAAGGAAGTTCGGTCTGTTTTTTCTTTGAAAATG
TCTGGTTCAAGGGCATCCAAGCAAGTCCAACCACTGAACAAATCTGTTTGGAATGTAGAT
TCAGCCGGATCATCTAGCACTTTGATGGAGAGTGGACATGTGCCAGTATTGAGAAATACA
TTTGAAAATGCTCTTCCAAGTTCTAGTGGCAATTTAATTTATGCCACTGAAGTATCTGAT
GCAAGAAGGAATGAAAATTTAATTGAAGACTGGGATCTTATTGAGCACCCTCCTTTTCCT
CCTCCTCCATCACATACAGAAGATGTTGAACATTGGACCCGAGCCATGTTTATTGATGCA
ACAAAGAAATAA