Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400070879
CDS Infomation

pacid=37471792 polypeptide=PGSC0003DMP400047928 locus=PGSC0003DMG401027561 ID=PGSC0003DMT400070879.v4.03 annot-version=v4.03
Sequence

ATGGCTAAACGACTGCACAGTTTTGCTCTAAATAAGTGTCAAAAGAGAGTCTGCATTGCA
AAAGATCGCATAAGTCAATTACCTGATGAAGTTTTGGTACATATACTATCTTTTCTTACT
GTTGAAGAAGCAGCTAACACAAGTGTCCTCTCAAGGCGGTGGCTAAGCTTGTGGAGATAC
ATTGATCGGCTTGATTTTGATGCTACCAAACCCTTGGATAAAGTAGCCTTGCAACCCAAG
CTACGGAAAAGGCAAATGAAGAAGTATCTTAGATGGGTCAGCTGTACTTTGCAAATGTGT
AAAGGGCAGAGACTAGACCAATTTCGGGTTTGTTTTGATTTGAACAAATTCGCGCGGCAT
GAGATTGATAAATGGATTGAATTTGCGTTTTCTAGGAATGTTCAAAGACTAGAGTTAGAC
TTATTAAAGGGTGGAGAGCACATTCGTAATTTTGGTTACTGTTATACTTTTCCAGCATGG
CTCCTTGGTCTTGGTGATTCTGCTGACTCTTCTTCTTACATACCTCATTCTAATGACCTC
CAAATACTCTCACCTGTCAAGCAGAACTTCAAGTCTCTAAAAGTGCTGCTATTTAAATCA
GTAAATGTCACGGGCAAAGTTCTTGAGTTCTTTCTACACAATTGTCCATTTCTTGAAACA
ATGGCAGTTCATGGATCAGGAACTTTGGTAAATTTGGAAGTTGTTGGTCCGTCCCTCAAG
TTGAGACACTTGGAGATACAGTACTGCTACAAAGTAGAATCACTTAAAATTTGTGATACA
AACCTTGTAACATTAAGGACTTCAGTAGGAACGAAATTACTGCTTAAGAATGTCCCAATG
CTGGTTGAGGTGAAAATTTCTAGTGCGGCATTCAACCATATTTTGAATGACATATCCTCT
TGTCTTTCCTGTGTTATCTCTCAGCTTGTGGTCCTTCATTTAACTACTCATTCATGGTTT
AAACTTTCGCAGGAAAAATTGGAGCATTACAATTTTCCTCAACTTACTAAGCTCAAGAAA
TTTGTCCTCACTACATGCGGACAGAAAGACAGGAGTCTCTTAGGTTGCACGTCTATAATA
AGGGCTGCTCCCCAGTTGAAGGAATTTGAACTACAGTTGATATCGGGATGTTCCGTCCAG
ACTGTTAGAGAGTGTAGGAAGGCCGCCATAAAATGTCGACTGCATCACCTCAAAGTGGTC
AAGTTGTGGGGGTTTTATAGCGGTGCAGCTCATGTTGAACTTGTTAGGTACTTCTTGGAA
AATGCTATTGCACTCGAGAAAATCATCTTTGATCCCAGGACCCCAATGCCCACTCGCTTT
CCTCTTGACCCTTTGTTCGTTAAGAAGGCGCAAACTGCAAGAAATCTTGCTAAGCTCCAT
CTTGAAGGTGAAGTACCTCCGGATATTGAGTTGGTCATATTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400047928
PEP Infomation

pacid=37471792 transcript=PGSC0003DMT400070879 locus=PGSC0003DMG401027561 ID=PGSC0003DMT400070879.v4.03 annot-version=v4.03
Sequence

MAKRLHSFALNKCQKRVCIAKDRISQLPDEVLVHILSFLTVEEAANTSVLSRRWLSLWRY
IDRLDFDATKPLDKVALQPKLRKRQMKKYLRWVSCTLQMCKGQRLDQFRVCFDLNKFARH
EIDKWIEFAFSRNVQRLELDLLKGGEHIRNFGYCYTFPAWLLGLGDSADSSSYIPHSNDL
QILSPVKQNFKSLKVLLFKSVNVTGKVLEFFLHNCPFLETMAVHGSGTLVNLEVVGPSLK
LRHLEIQYCYKVESLKICDTNLVTLRTSVGTKLLLKNVPMLVEVKISSAAFNHILNDISS
CLSCVISQLVVLHLTTHSWFKLSQEKLEHYNFPQLTKLKKFVLTTCGQKDRSLLGCTSII
RAAPQLKEFELQLISGCSVQTVRECRKAAIKCRLHHLKVVKLWGFYSGAAHVELVRYFLE
NAIALEKIIFDPRTPMPTRFPLDPLFVKKAQTARNLAKLHLEGEVPPDIELVIL*

Transcript Sequence

Transcript ID

PGSC0003DMT400070879
Transcript Infomation

pacid=37471792 locus=PGSC0003DMG401027561 ID=PGSC0003DMT400070879.v4.03 annot-version=v4.03
Sequence

ATGGCTAAACGACTGCACAGTTTTGCTCTAAATAAGTGTCAAAAGAGAGTCTGCATTGCA
AAAGATCGCATAAGTCAATTACCTGATGAAGTTTTGGTACATATACTATCTTTTCTTACT
GTTGAAGAAGCAGCTAACACAAGTGTCCTCTCAAGGCGGTGGCTAAGCTTGTGGAGATAC
ATTGATCGGCTTGATTTTGATGCTACCAAACCCTTGGATAAAGTAGCCTTGCAACCCAAG
CTACGGAAAAGGCAAATGAAGAAGTATCTTAGATGGGTCAGCTGTACTTTGCAAATGTGT
AAAGGGCAGAGACTAGACCAATTTCGGGTTTGTTTTGATTTGAACAAATTCGCGCGGCAT
GAGATTGATAAATGGATTGAATTTGCGTTTTCTAGGAATGTTCAAAGACTAGAGTTAGAC
TTATTAAAGGGTGGAGAGCACATTCGTAATTTTGGTTACTGTTATACTTTTCCAGCATGG
CTCCTTGGTCTTGGTGATTCTGCTGACTCTTCTTCTTACATACCTCATTCTAATGACCTC
CAAATACTCTCACCTGTCAAGCAGAACTTCAAGTCTCTAAAAGTGCTGCTATTTAAATCA
GTAAATGTCACGGGCAAAGTTCTTGAGTTCTTTCTACACAATTGTCCATTTCTTGAAACA
ATGGCAGTTCATGGATCAGGAACTTTGGTAAATTTGGAAGTTGTTGGTCCGTCCCTCAAG
TTGAGACACTTGGAGATACAGTACTGCTACAAAGTAGAATCACTTAAAATTTGTGATACA
AACCTTGTAACATTAAGGACTTCAGTAGGAACGAAATTACTGCTTAAGAATGTCCCAATG
CTGGTTGAGGTGAAAATTTCTAGTGCGGCATTCAACCATATTTTGAATGACATATCCTCT
TGTCTTTCCTGTGTTATCTCTCAGCTTGTGGTCCTTCATTTAACTACTCATTCATGGTTT
AAACTTTCGCAGGAAAAATTGGAGCATTACAATTTTCCTCAACTTACTAAGCTCAAGAAA
TTTGTCCTCACTACATGCGGACAGAAAGACAGGAGTCTCTTAGGTTGCACGTCTATAATA
AGGGCTGCTCCCCAGTTGAAGGAATTTGAACTACAGTTGATATCGGGATGTTCCGTCCAG
ACTGTTAGAGAGTGTAGGAAGGCCGCCATAAAATGTCGACTGCATCACCTCAAAGTGGTC
AAGTTGTGGGGGTTTTATAGCGGTGCAGCTCATGTTGAACTTGTTAGGTACTTCTTGGAA
AATGCTATTGCACTCGAGAAAATCATCTTTGATCCCAGGACCCCAATGCCCACTCGCTTT
CCTCTTGACCCTTTGTTCGTTAAGAAGGCGCAAACTGCAAGAAATCTTGCTAAGCTCCAT
CTTGAAGGTGAAGTACCTCCGGATATTGAGTTGGTCATATTGTAA