Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400070871
CDS Infomation

pacid=37472769 polypeptide=PGSC0003DMP400047922 locus=PGSC0003DMG400027558 ID=PGSC0003DMT400070871.v4.03 annot-version=v4.03
Sequence

ATGCACATCAGATTCAGAGGCAAAGCTGTAGTTGTATCAACTCAGTGTTCCATATATCAT
TGCAATGGCTATAGAGACTTCCGTTTCAGATCTCAATATCTCTACTCATCAACCTCTACA
CCTGCCCCGACCCATTTCTTGGTGAAATACCTTGTTGATTCTCTCGGATTCTCCGATGAA
GAAGCTGCCTCTACATCCTCCAAGGTAACTTCATTGAAAACCTTTAAGAATCCTGATTTA
GTCATCAATTTCTTGAAACAAATCGGTTTGGACAATACCCAGATGAAAAAAATGGTTTCT
TTAGCACCCAAAATGCTATTATCAGATGTTTCCAAAACCCTAAAACCCAAATTCCAGTGC
CTTATGGATATCGGGTTATCCGGGTCGGACCTGGTGAATGTAATTGCTAGAGATTCAAAA
ATTGTTGAAAGAGGTTTAGATACTCATTTGAGACCTACCATTGATCGTCTTAGGAGAACT
TTGGGTAGTGATGAAAATGTAGTGAAGGCGTTAAAGAGAGCTCCTTGGTTGCTTACTTTT
GGTGCTCATAATATTATGGAGACTAATCTATTGTTGTTGAAAAATTGTGGTGTTCCTGAT
GAGGGAATAAAAACACTCGTGCTTAGAAATCCTAGGTATTTTGCACAAAATCCTGAGTGG
ATTAAGGGTTTGTTGCATAGGGTGGAGAATGATTTTCGAGTTCCGCTTGACTCTCCTATG
TTTCCTTATGGATTTCATACATTAGCCTCACAAAAGCAGTGTACCGTGGATAGGAAGATT
GGAATTTTCAAGAGTTTTGGATGGTCTGATAATGAGATATTTGAGATGTTTAGGAAGTTT
CCTTATTGTATTGCTCAGTCAGAGGTCAAAATTCAGAAAGCATTGAATCTTTACATTAAT
GAGCTTGGTTCTGAACCTGCTTACTTGGCTTCTCAGCCTTCAGTTTTGATCTATAGTCTG
GAAAAAAGGGTGCTACCTCGGATGCAAGTCTTGAAAATTTTAGATGAAAATAAGCTTGAG
AGGAGAAAGTTGGCTCTTTATACTGTTGTGAGCTTATCAGAGACAAAGTTCATTGATTAT
TTTGTGCTGCCCTACAAGGATCAGATACCTGATTTGTATGAATCACATAAGAAAACTGTG
GCTCCCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400047922
PEP Infomation

pacid=37472769 transcript=PGSC0003DMT400070871 locus=PGSC0003DMG400027558 ID=PGSC0003DMT400070871.v4.03 annot-version=v4.03
Sequence

MHIRFRGKAVVVSTQCSIYHCNGYRDFRFRSQYLYSSTSTPAPTHFLVKYLVDSLGFSDE
EAASTSSKVTSLKTFKNPDLVINFLKQIGLDNTQMKKMVSLAPKMLLSDVSKTLKPKFQC
LMDIGLSGSDLVNVIARDSKIVERGLDTHLRPTIDRLRRTLGSDENVVKALKRAPWLLTF
GAHNIMETNLLLLKNCGVPDEGIKTLVLRNPRYFAQNPEWIKGLLHRVENDFRVPLDSPM
FPYGFHTLASQKQCTVDRKIGIFKSFGWSDNEIFEMFRKFPYCIAQSEVKIQKALNLYIN
ELGSEPAYLASQPSVLIYSLEKRVLPRMQVLKILDENKLERRKLALYTVVSLSETKFIDY
FVLPYKDQIPDLYESHKKTVAP*

Transcript Sequence

Transcript ID

PGSC0003DMT400070871
Transcript Infomation

pacid=37472769 locus=PGSC0003DMG400027558 ID=PGSC0003DMT400070871.v4.03 annot-version=v4.03
Sequence

ATGCACATCAGATTCAGAGGCAAAGCTGTAGTTGTATCAACTCAGTGTTCCATATATCAT
TGCAATGGCTATAGAGACTTCCGTTTCAGATCTCAATATCTCTACTCATCAACCTCTACA
CCTGCCCCGACCCATTTCTTGGTGAAATACCTTGTTGATTCTCTCGGATTCTCCGATGAA
GAAGCTGCCTCTACATCCTCCAAGGTAACTTCATTGAAAACCTTTAAGAATCCTGATTTA
GTCATCAATTTCTTGAAACAAATCGGTTTGGACAATACCCAGATGAAAAAAATGGTTTCT
TTAGCACCCAAAATGCTATTATCAGATGTTTCCAAAACCCTAAAACCCAAATTCCAGTGC
CTTATGGATATCGGGTTATCCGGGTCGGACCTGGTGAATGTAATTGCTAGAGATTCAAAA
ATTGTTGAAAGAGGTTTAGATACTCATTTGAGACCTACCATTGATCGTCTTAGGAGAACT
TTGGGTAGTGATGAAAATGTAGTGAAGGCGTTAAAGAGAGCTCCTTGGTTGCTTACTTTT
GGTGCTCATAATATTATGGAGACTAATCTATTGTTGTTGAAAAATTGTGGTGTTCCTGAT
GAGGGAATAAAAACACTCGTGCTTAGAAATCCTAGGTATTTTGCACAAAATCCTGAGTGG
ATTAAGGGTTTGTTGCATAGGGTGGAGAATGATTTTCGAGTTCCGCTTGACTCTCCTATG
TTTCCTTATGGATTTCATACATTAGCCTCACAAAAGCAGTGTACCGTGGATAGGAAGATT
GGAATTTTCAAGAGTTTTGGATGGTCTGATAATGAGATATTTGAGATGTTTAGGAAGTTT
CCTTATTGTATTGCTCAGTCAGAGGTCAAAATTCAGAAAGCATTGAATCTTTACATTAAT
GAGCTTGGTTCTGAACCTGCTTACTTGGCTTCTCAGCCTTCAGTTTTGATCTATAGTCTG
GAAAAAAGGGTGCTACCTCGGATGCAAGTCTTGAAAATTTTAGATGAAAATAAGCTTGAG
AGGAGAAAGTTGGCTCTTTATACTGTTGTGAGCTTATCAGAGACAAAGTTCATTGATTAT
TTTGTGCTGCCCTACAAGGATCAGATACCTGATTTGTATGAATCACATAAGAAAACTGTG
GCTCCCTAG