Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400070819
CDS Infomation

pacid=37474933 polypeptide=PGSC0003DMP400047882 locus=PGSC0003DMG400027536 ID=PGSC0003DMT400070819.v4.03 annot-version=v4.03
Sequence

ATGGTGAAGGTGATGGAGAAGGATGCTGTGGTGGTGTCACTGGTGGTATGGCTAATCTTG
GTTGTACATCATCTTAAGCTCATTTATGCTAATATGGAAGGTGATGCATTGCATAGTCTA
CGCGTCAATTTACAAGATCCTAACAATGTGCTACAGAGCTGGGACCCTACCCTTGTTAAT
CCTTGCACATGGTTTCATGTTACCTGCAACAATGACAACAGTGTTATAAGAGTTGATTTA
GGAAATGCAGCTTTATCTGGTCTGTTAGTCCCACAGCTTGGCCTTTTGAAGAATTTGCAG
TACTTGCATATTCTGTCTCAAACTGGCTTTCAAGTTCTTATTGTAACCCATGCTCTTTTG
AAGATGCAACTGTATGGAAGTTCACAGAGACAGGAGCTTTACAGTAATAACATAAGTGGT
CTAATACCGAGTGATCTTGGGAATTTGACTAATTTGGTCAGCTTGGATCTCTACTTGAAC
AACTTCGTCGGTCCCATCCCAGATTCCTTGGGCAAGCTGTCGAAATTGAGATTCCTGGAT
CTGTCAAACAACCGTCTCTCAGGTGTTGTTCCAGATAATGGTTCCTTTTCTCTATTCACG
CCTATCAGTTTTGCGAATAATTTAGATCTTTGCGGGCCTGTAACTGGACGCCCTTGTCCG
GGATCTCCTCCATTCTCCCCTCCGCCTCCATTTGTTCCACCACCACCAATTTCTGCTCCA
GGAGGAAATGGTGCAACTGGAGCAATTGCTGGAGGTGTAGCTGCTGGTGCTGCTCTACTA
TTTGCTGCTCCTGCCATTGCATTTGCCTGGTGGCGCCGTAGAAAGCCACAAGAATATTTC
TTTGATGTACCAGCTGAAGAAGATCCTGAAGTTCACTTAGGTCAACTGAAAAGGTTCTCC
CTCCGAGAGCTACAAGTTGCAACCGACAGTTTTAGCAATAAAAATATTCTGGGTCGAGGT
GGATTTGGTAAGGTATACAAAGGACGCTTAGCAGATGGATCATTGGTGGCTGTTAAGCGG
CTTAAGGAGGAGCGTACTCCTGGAGGGGAGTTGCAATTTCAAACAGAAGTTGAGATGATT
AGCATGGCAGTGCATAGGAATCTTCTACGATTGCGTGGTTTCTGTATGACACCAACTGAA
AGACTGCTTGTCTACCCCTACATGGCGAATGGAAGTGTTGCATCATGCCTGAGAGAACGA
CCGCCTTCTGAACCGCCACTTGATTGGCCAACGCGAAAGCGCATTGCTTTGGGGTCTGCC
AGGGGATTATCGTATTTGCATGATCATTGTGACCCTAAGATTATCCATCGTGATGTGAAG
GCTGCAAATATATTGCTAGATGAAGAATTTGAGGCTGTTGTTGGAGACTTTGGTTTGGCT
AAACTTATGGACTACAAGGATACACATGTTACAACTGCTGTGCGTGGTACAATTGGGCAT
ATAGCTCCAGAATACCTGTCCACAGGGAAGTCTTCAGAAAAGACTGATGTTTTTGGGTAT
GGGATCATGCTTCTGGAGCTAATCACCGGCCAACGTGCTTTTGATCTTGCTCGGCTTGCA
AATGATGACGATGTCATGTTGCTTGACTGGGTGAAAGGACTCCTCAAAGAGAAGAAATTG
GAAATGCTGGTTGACCCTGATCTTCAGAACAAGTATGTGGAGGCTGAGGTGGAGCAACTG
ATCCAAGTAGCATTGCTTTGTACACAAAGCAACCCAATGGATCGGCCTAAGATGTCGGAA
GTGGTGAGAATGCTTGAAGGTGATGGTTTGGCTGAAAGATGGGATGAGTGGCAGAAGGTA
GAAGTTCTCCGGCAGGAAGTGGAACTTGCACCACATCCTGGTTCTGATTGGCTTGTTGAC
TCAACAGAGAATTTACACGCAGTGGAATTATCGGGTCCAAGGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400047882
PEP Infomation

pacid=37474933 transcript=PGSC0003DMT400070819 locus=PGSC0003DMG400027536 ID=PGSC0003DMT400070819.v4.03 annot-version=v4.03
Sequence

MVKVMEKDAVVVSLVVWLILVVHHLKLIYANMEGDALHSLRVNLQDPNNVLQSWDPTLVN
PCTWFHVTCNNDNSVIRVDLGNAALSGLLVPQLGLLKNLQYLHILSQTGFQVLIVTHALL
KMQLYGSSQRQELYSNNISGLIPSDLGNLTNLVSLDLYLNNFVGPIPDSLGKLSKLRFLD
LSNNRLSGVVPDNGSFSLFTPISFANNLDLCGPVTGRPCPGSPPFSPPPPFVPPPPISAP
GGNGATGAIAGGVAAGAALLFAAPAIAFAWWRRRKPQEYFFDVPAEEDPEVHLGQLKRFS
LRELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMI
SMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSEPPLDWPTRKRIALGSA
RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH
IAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL
EMLVDPDLQNKYVEAEVEQLIQVALLCTQSNPMDRPKMSEVVRMLEGDGLAERWDEWQKV
EVLRQEVELAPHPGSDWLVDSTENLHAVELSGPR*

Transcript Sequence

Transcript ID

PGSC0003DMT400070819
Transcript Infomation

pacid=37474933 locus=PGSC0003DMG400027536 ID=PGSC0003DMT400070819.v4.03 annot-version=v4.03
Sequence

ATGGTGAAGGTGATGGAGAAGGATGCTGTGGTGGTGTCACTGGTGGTATGGCTAATCTTG
GTTGTACATCATCTTAAGCTCATTTATGCTAATATGGAAGGTGATGCATTGCATAGTCTA
CGCGTCAATTTACAAGATCCTAACAATGTGCTACAGAGCTGGGACCCTACCCTTGTTAAT
CCTTGCACATGGTTTCATGTTACCTGCAACAATGACAACAGTGTTATAAGAGTTGATTTA
GGAAATGCAGCTTTATCTGGTCTGTTAGTCCCACAGCTTGGCCTTTTGAAGAATTTGCAG
TACTTGCATATTCTGTCTCAAACTGGCTTTCAAGTTCTTATTGTAACCCATGCTCTTTTG
AAGATGCAACTGTATGGAAGTTCACAGAGACAGGAGCTTTACAGTAATAACATAAGTGGT
CTAATACCGAGTGATCTTGGGAATTTGACTAATTTGGTCAGCTTGGATCTCTACTTGAAC
AACTTCGTCGGTCCCATCCCAGATTCCTTGGGCAAGCTGTCGAAATTGAGATTCCTGGAT
CTGTCAAACAACCGTCTCTCAGGTGTTGTTCCAGATAATGGTTCCTTTTCTCTATTCACG
CCTATCAGTTTTGCGAATAATTTAGATCTTTGCGGGCCTGTAACTGGACGCCCTTGTCCG
GGATCTCCTCCATTCTCCCCTCCGCCTCCATTTGTTCCACCACCACCAATTTCTGCTCCA
GGAGGAAATGGTGCAACTGGAGCAATTGCTGGAGGTGTAGCTGCTGGTGCTGCTCTACTA
TTTGCTGCTCCTGCCATTGCATTTGCCTGGTGGCGCCGTAGAAAGCCACAAGAATATTTC
TTTGATGTACCAGCTGAAGAAGATCCTGAAGTTCACTTAGGTCAACTGAAAAGGTTCTCC
CTCCGAGAGCTACAAGTTGCAACCGACAGTTTTAGCAATAAAAATATTCTGGGTCGAGGT
GGATTTGGTAAGGTATACAAAGGACGCTTAGCAGATGGATCATTGGTGGCTGTTAAGCGG
CTTAAGGAGGAGCGTACTCCTGGAGGGGAGTTGCAATTTCAAACAGAAGTTGAGATGATT
AGCATGGCAGTGCATAGGAATCTTCTACGATTGCGTGGTTTCTGTATGACACCAACTGAA
AGACTGCTTGTCTACCCCTACATGGCGAATGGAAGTGTTGCATCATGCCTGAGAGAACGA
CCGCCTTCTGAACCGCCACTTGATTGGCCAACGCGAAAGCGCATTGCTTTGGGGTCTGCC
AGGGGATTATCGTATTTGCATGATCATTGTGACCCTAAGATTATCCATCGTGATGTGAAG
GCTGCAAATATATTGCTAGATGAAGAATTTGAGGCTGTTGTTGGAGACTTTGGTTTGGCT
AAACTTATGGACTACAAGGATACACATGTTACAACTGCTGTGCGTGGTACAATTGGGCAT
ATAGCTCCAGAATACCTGTCCACAGGGAAGTCTTCAGAAAAGACTGATGTTTTTGGGTAT
GGGATCATGCTTCTGGAGCTAATCACCGGCCAACGTGCTTTTGATCTTGCTCGGCTTGCA
AATGATGACGATGTCATGTTGCTTGACTGGGTGAAAGGACTCCTCAAAGAGAAGAAATTG
GAAATGCTGGTTGACCCTGATCTTCAGAACAAGTATGTGGAGGCTGAGGTGGAGCAACTG
ATCCAAGTAGCATTGCTTTGTACACAAAGCAACCCAATGGATCGGCCTAAGATGTCGGAA
GTGGTGAGAATGCTTGAAGGTGATGGTTTGGCTGAAAGATGGGATGAGTGGCAGAAGGTA
GAAGTTCTCCGGCAGGAAGTGGAACTTGCACCACATCCTGGTTCTGATTGGCTTGTTGAC
TCAACAGAGAATTTACACGCAGTGGAATTATCGGGTCCAAGGTGA