Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400070811
CDS Infomation

pacid=37474549 polypeptide=PGSC0003DMP400047875 locus=PGSC0003DMG401027531 ID=PGSC0003DMT400070811.v4.03 annot-version=v4.03
Sequence

ATGTCGGACTATCCCGTGCTTGATAATCTCCCCATTGATAAATGGAAGGTACCAGCATTA
AGGGAAGAGCTTAAGAGGAGGAACTTAATGACAAAAGGTTTGAAGGATGATCTTGTTAAT
CGATTAAATAATGCTATCCACAGAGAAAGAGGAGAACCTGAGGTTGAAGAGAGTACTGAA
ATAAATCCCGATGTTCTTGAATGGAATAATAAAAGTATGGGGCATCCCCAAAACAAAGTT
ATTAAGGGTTCTGATCGTGATACTGATCCTGCCAATGCCACCAAAGTCTTGGATGAGGTT
GCAACTGGGGGTACTGATGACGTTTCTGGAGTAAGAGAACATTCAGAGGCTTCTGTTGGT
AGCACTAGTGTTATAAATGAGATTGTGTCTACTGATCAATTTGTTGAAGTCAAAATTGAT
AAGAAACACGAGGTTATCGATTCTTCTCTGAACAACGATGTTGTTGATGAGGTATCTGGA
GTTAGGTATGCTGCTATTCAGAGCAGTGGCACTGTACAGGACATTGAGGATATGCGAATT
TCATCTTCTGAGGGAGTGCTTGAGGATAACCTTAGGAGACAAGAGAATGATGCCGAGTTA
ACCCCAGTAACATCCAAGGATGCCTTGGGAAACAATAGCATTAAGTTGGAGGATGAGGGT
CTGAAACTCTCAGGCATGGATGCTGAGTATGATAAGTCCAATCCAGACACTCAGGTATAT
GAGGTCAACCCTGATTTAGGGTCTCAAGTAAAATCTGACACATTTTCTACTGATACTTTG
CCCATTAATGAAAATAATGATTTAAATGATAATTTGAATGCTGATAATGTTAAATTAGTA
ACTGAAGTTGTTAGGCAAGAGAAGGAGTCATCCAGCAAAGATCTGTCAGATGTTGGTAGC
ATTTATCCATTGCATGATCAGATGCCACATGAGATGCAGGGTCATGTTGGAGAAACTGTT
GATGACAAATCTTCGGAGGTGAAATTTAGCATGAAAAAGGCCAATGCAGATCAGGTTTCT
GTTGCTGTTACCAAGGTAGAGCATGGTTTAGAAAGTAACACATTGAATAATAGTGAGCAA
AAAGATGTTCAGTTTGAAAAAGCTAGAACTTTAGGTGATGTTATAGACCCTAGTTTGTCA
CCCAAGAAAGTTGAGGTATCTGCTGAAGATAAACATTGTATTGCTGCTTCCAATGATGAT
AGAAAAGTTTTGAGCAAGATATCTGAGGTAGCGGATGATCAGAATATGGAAAAGATAAAT
TTGGATCAATCTTCAGCTGATGATTCCATGGAGGAGGATGTAGTAGAGACAAAGCATGTG
GCTTTTGATCATATTTCTAAGGAGAATGATAAGACTGAAGAGTCTATTACGGGAATGACA
AAAGAGCCCAAAGTTGTACGAAATGGCTCTTCTGATGCAACGCAGCAAGACAATCCTTCT
GAGAAGGTTGAGTCTCCTCAAGAATCTAAAGATGGGTCTCCTGAATTGTCAGAGAAGAGA
AAGTTTCAAGGAGATGGGAGTAAAGAGCCTGCAAAAAGGCAGCGCAAATGGAACACTGAG
AATTTGAATACTGCTGAGCCACAAAATTCAAATATTGCATTATCAGAGAACTTGGTTCAG
ACCATCCCTGTCAAGCCTATCTTTGGCAGGACCGACTCTACAGTTAGTGAGGATGCACCC
AAGGAGCGCCTTGTACCAAAGTCTTCCAAAACAGCCACTAATTCTCTCAAAATTGAGAAC
TTCTTGCGGCCCTTTACACTGAAAGCTGTGCAAGAGCTCCTTGCAAGAACTGGTGAAGTC
TGCAGTTTCTGGATGGACCAGATAAAGACCCATTGCTATGTCACGTATTCTTCGGTAGAG
GAAGCCATAGAGACCCGAAATGCTGTTTACAACCTCCAATGGCCACCAAAAGGAGGTCGT
CTCCTGGTTGCAGATTTTGTTGCTCCCCAACAGGTGCAAACCAAGATAGACGGACGGGAG
CCTGCTACTCCAGCGACAAATCGCAGTCCTGCAGTGCCTCCAGCTTCATCCTCTGTTCAA
GCACCACCTGCTTGGCAGCAGGGTCGCAAACAGCAGGTTGAGTCAGAACATCCACTAATG
CGCCAGCCACCACCTGCTCCTCCTACTGCGCTACCAATAAAAGAGAGGTTGGCTCCACCT
GCTTGGCAGCAGGGTCGCAAACAACAGGTTGAGTCAGAACATCCACTCACGCGCCAGGCA
CCACCTGCTCCTCCTACTGCGCCACCAATAAAAGAGAAGTTGGTTCCACCTGTTGCTGAT
AAAAATGACCCCCCTGTTATTACTTTGGATGACATCTTCAGAAAGACCAAAGCCGCTCCC
CGTATCTATTATTTACCGCTGACTGATGAAGAAGTTGCTAAAAAGCTTGCCAGTAGAGGA
GGTGCTGAGAACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400047875
PEP Infomation

pacid=37474549 transcript=PGSC0003DMT400070811 locus=PGSC0003DMG401027531 ID=PGSC0003DMT400070811.v4.03 annot-version=v4.03
Sequence

MSDYPVLDNLPIDKWKVPALREELKRRNLMTKGLKDDLVNRLNNAIHRERGEPEVEESTE
INPDVLEWNNKSMGHPQNKVIKGSDRDTDPANATKVLDEVATGGTDDVSGVREHSEASVG
STSVINEIVSTDQFVEVKIDKKHEVIDSSLNNDVVDEVSGVRYAAIQSSGTVQDIEDMRI
SSSEGVLEDNLRRQENDAELTPVTSKDALGNNSIKLEDEGLKLSGMDAEYDKSNPDTQVY
EVNPDLGSQVKSDTFSTDTLPINENNDLNDNLNADNVKLVTEVVRQEKESSSKDLSDVGS
IYPLHDQMPHEMQGHVGETVDDKSSEVKFSMKKANADQVSVAVTKVEHGLESNTLNNSEQ
KDVQFEKARTLGDVIDPSLSPKKVEVSAEDKHCIAASNDDRKVLSKISEVADDQNMEKIN
LDQSSADDSMEEDVVETKHVAFDHISKENDKTEESITGMTKEPKVVRNGSSDATQQDNPS
EKVESPQESKDGSPELSEKRKFQGDGSKEPAKRQRKWNTENLNTAEPQNSNIALSENLVQ
TIPVKPIFGRTDSTVSEDAPKERLVPKSSKTATNSLKIENFLRPFTLKAVQELLARTGEV
CSFWMDQIKTHCYVTYSSVEEAIETRNAVYNLQWPPKGGRLLVADFVAPQQVQTKIDGRE
PATPATNRSPAVPPASSSVQAPPAWQQGRKQQVESEHPLMRQPPPAPPTALPIKERLAPP
AWQQGRKQQVESEHPLTRQAPPAPPTAPPIKEKLVPPVADKNDPPVITLDDIFRKTKAAP
RIYYLPLTDEEVAKKLASRGGAEN*

Transcript Sequence

Transcript ID

PGSC0003DMT400070811
Transcript Infomation

pacid=37474549 locus=PGSC0003DMG401027531 ID=PGSC0003DMT400070811.v4.03 annot-version=v4.03
Sequence

ATGTCGGACTATCCCGTGCTTGATAATCTCCCCATTGATAAATGGAAGGTACCAGCATTA
AGGGAAGAGCTTAAGAGGAGGAACTTAATGACAAAAGGTTTGAAGGATGATCTTGTTAAT
CGATTAAATAATGCTATCCACAGAGAAAGAGGAGAACCTGAGGTTGAAGAGAGTACTGAA
ATAAATCCCGATGTTCTTGAATGGAATAATAAAAGTATGGGGCATCCCCAAAACAAAGTT
ATTAAGGGTTCTGATCGTGATACTGATCCTGCCAATGCCACCAAAGTCTTGGATGAGGTT
GCAACTGGGGGTACTGATGACGTTTCTGGAGTAAGAGAACATTCAGAGGCTTCTGTTGGT
AGCACTAGTGTTATAAATGAGATTGTGTCTACTGATCAATTTGTTGAAGTCAAAATTGAT
AAGAAACACGAGGTTATCGATTCTTCTCTGAACAACGATGTTGTTGATGAGGTATCTGGA
GTTAGGTATGCTGCTATTCAGAGCAGTGGCACTGTACAGGACATTGAGGATATGCGAATT
TCATCTTCTGAGGGAGTGCTTGAGGATAACCTTAGGAGACAAGAGAATGATGCCGAGTTA
ACCCCAGTAACATCCAAGGATGCCTTGGGAAACAATAGCATTAAGTTGGAGGATGAGGGT
CTGAAACTCTCAGGCATGGATGCTGAGTATGATAAGTCCAATCCAGACACTCAGGTATAT
GAGGTCAACCCTGATTTAGGGTCTCAAGTAAAATCTGACACATTTTCTACTGATACTTTG
CCCATTAATGAAAATAATGATTTAAATGATAATTTGAATGCTGATAATGTTAAATTAGTA
ACTGAAGTTGTTAGGCAAGAGAAGGAGTCATCCAGCAAAGATCTGTCAGATGTTGGTAGC
ATTTATCCATTGCATGATCAGATGCCACATGAGATGCAGGGTCATGTTGGAGAAACTGTT
GATGACAAATCTTCGGAGGTGAAATTTAGCATGAAAAAGGCCAATGCAGATCAGGTTTCT
GTTGCTGTTACCAAGGTAGAGCATGGTTTAGAAAGTAACACATTGAATAATAGTGAGCAA
AAAGATGTTCAGTTTGAAAAAGCTAGAACTTTAGGTGATGTTATAGACCCTAGTTTGTCA
CCCAAGAAAGTTGAGGTATCTGCTGAAGATAAACATTGTATTGCTGCTTCCAATGATGAT
AGAAAAGTTTTGAGCAAGATATCTGAGGTAGCGGATGATCAGAATATGGAAAAGATAAAT
TTGGATCAATCTTCAGCTGATGATTCCATGGAGGAGGATGTAGTAGAGACAAAGCATGTG
GCTTTTGATCATATTTCTAAGGAGAATGATAAGACTGAAGAGTCTATTACGGGAATGACA
AAAGAGCCCAAAGTTGTACGAAATGGCTCTTCTGATGCAACGCAGCAAGACAATCCTTCT
GAGAAGGTTGAGTCTCCTCAAGAATCTAAAGATGGGTCTCCTGAATTGTCAGAGAAGAGA
AAGTTTCAAGGAGATGGGAGTAAAGAGCCTGCAAAAAGGCAGCGCAAATGGAACACTGAG
AATTTGAATACTGCTGAGCCACAAAATTCAAATATTGCATTATCAGAGAACTTGGTTCAG
ACCATCCCTGTCAAGCCTATCTTTGGCAGGACCGACTCTACAGTTAGTGAGGATGCACCC
AAGGAGCGCCTTGTACCAAAGTCTTCCAAAACAGCCACTAATTCTCTCAAAATTGAGAAC
TTCTTGCGGCCCTTTACACTGAAAGCTGTGCAAGAGCTCCTTGCAAGAACTGGTGAAGTC
TGCAGTTTCTGGATGGACCAGATAAAGACCCATTGCTATGTCACGTATTCTTCGGTAGAG
GAAGCCATAGAGACCCGAAATGCTGTTTACAACCTCCAATGGCCACCAAAAGGAGGTCGT
CTCCTGGTTGCAGATTTTGTTGCTCCCCAACAGGTGCAAACCAAGATAGACGGACGGGAG
CCTGCTACTCCAGCGACAAATCGCAGTCCTGCAGTGCCTCCAGCTTCATCCTCTGTTCAA
GCACCACCTGCTTGGCAGCAGGGTCGCAAACAGCAGGTTGAGTCAGAACATCCACTAATG
CGCCAGCCACCACCTGCTCCTCCTACTGCGCTACCAATAAAAGAGAGGTTGGCTCCACCT
GCTTGGCAGCAGGGTCGCAAACAACAGGTTGAGTCAGAACATCCACTCACGCGCCAGGCA
CCACCTGCTCCTCCTACTGCGCCACCAATAAAAGAGAAGTTGGTTCCACCTGTTGCTGAT
AAAAATGACCCCCCTGTTATTACTTTGGATGACATCTTCAGAAAGACCAAAGCCGCTCCC
CGTATCTATTATTTACCGCTGACTGATGAAGAAGTTGCTAAAAAGCTTGCCAGTAGAGGA
GGTGCTGAGAACTAG