Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400070801
CDS Infomation

pacid=37437503 polypeptide=PGSC0003DMP400047866 locus=PGSC0003DMG400027527 ID=PGSC0003DMT400070801.v4.03 annot-version=v4.03
Sequence

ATGGGAGAAAAGGATGTAATACGAACAAGTTTAAGTGATGAATACGAAGTGACAGATATT
TTAGGACGAGGAGGATTTTCAGTAGTAAGGAGAGGAAAAAATAGAAGAACAAATGAAGTT
GTTGCAATCAAGACTCTCCGGCGGTACGGGGCAGTACCGCCGGAGAAGAAAGAAAATAAT
AATAATAATAAGTCGTCAAGAGTAGTACCAGCTTTGATATGTGAGACTTTATTGACAAAT
GAATTGTTAGTGATGAGGAAGATCGTTGAAGATGTTTCTCCTCATCCTAATGTTATTCAT
TTATACGATGTTTGTGACGATTCTTTTGGTGTTCATCTTATATTGGAGCTTTGTTCTGGT
GGCGAGCTATTTGATCGGATTGTTGGACAAGCAAGGTATAACGAGGCCGGGGCTGCTGCA
GTGGTGAGACAAATAGCTAAAGGACTTGAGGCGTTACATGGGGCAAATATAGTTCATAGG
GACTTGAAACCAGAAAACTGTTTATTTTTAAACAAAGATGAGAATTCACCATTGAAGATC
ATGGACTTTGGTCTTAGCTCTTTTGAGGATTTTGCTAATCCAGTGGTTGGTTTATTTGGT
TCAATTGATTATGTTTCACCAGAAGCACTTTCAAGGGATAAAATCACTACTAAGACTGAT
ATTTGGTCACTTGGTGTTATTCTTTACATTCTTCTTTCCGGGTACCCACCTTTCTTCGCA
CCGTCCAATCGTCAAAAGCAACAAATGATATTAAATGGACAATTCAGTTTTGATGAGAAA
ACATGGAAGAATATATCTTCATCAGCAAAACAACTAATTTCCAATCTTTTAAAAGTTGAT
CCCAACATGAGGCCTACTGCTCAACAGATAGTAGAAGATGCATGGGTGAGGGGAGAGTTA
GCAAAGGAAGAAGAAATGGACGCTGAAATTGTTTCCCGTCTTCAAAGCTTCAACGCGCTG
CGCAAGTTCCGTGCAGCAGCCATGGCTAGTGTTCTCAGCAGCAGTTTTTCTTTGAGAACT
AAAAAATTGAAGAAATTAGTTGGTTCCTCATATGATCTCAAGCCTGAAGAATTAGAAAAC
TTGAGTCACATTTTCAAGAAAATATGCAAAAATGGAGAAAATGCAACATTGTTGGAGTTT
GAAGAGGTGTTAAAAGCAATGGAAATGACATCATTAGTGGGATTAGCAGAGAGGATATTT
GATCTATTTGATAACAATCGTGATGGAACGGTAGATATGAGAGAGATAATAGGTGGCTTC
TCTAGTCTTAAGTATTCACAAGGGGATGATGCACTTCGTCTTTGTTTTCAGATGTATGAT
ACTGATCGATCAGGCTGCATTAGCAAGGAAGAAGTTGCATCCATGTTGAGAGCACTTCCT
GAAGATTGTCTTCCAATGGATATAACAGAACCTGGAAAGCTTGATGAGATATTTGATTTA
ATGGATGCAAATAGTGATGGTAAAGTCACTTTTGATGAGTTTAAAGCTGCTATGCAAAGA
GATAGTTCACTTCAAGATGTTGTACTCTCCTCACTTCGTCCTAATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400047866
PEP Infomation

pacid=37437503 transcript=PGSC0003DMT400070801 locus=PGSC0003DMG400027527 ID=PGSC0003DMT400070801.v4.03 annot-version=v4.03
Sequence

MGEKDVIRTSLSDEYEVTDILGRGGFSVVRRGKNRRTNEVVAIKTLRRYGAVPPEKKENN
NNNKSSRVVPALICETLLTNELLVMRKIVEDVSPHPNVIHLYDVCDDSFGVHLILELCSG
GELFDRIVGQARYNEAGAAAVVRQIAKGLEALHGANIVHRDLKPENCLFLNKDENSPLKI
MDFGLSSFEDFANPVVGLFGSIDYVSPEALSRDKITTKTDIWSLGVILYILLSGYPPFFA
PSNRQKQQMILNGQFSFDEKTWKNISSSAKQLISNLLKVDPNMRPTAQQIVEDAWVRGEL
AKEEEMDAEIVSRLQSFNALRKFRAAAMASVLSSSFSLRTKKLKKLVGSSYDLKPEELEN
LSHIFKKICKNGENATLLEFEEVLKAMEMTSLVGLAERIFDLFDNNRDGTVDMREIIGGF
SSLKYSQGDDALRLCFQMYDTDRSGCISKEEVASMLRALPEDCLPMDITEPGKLDEIFDL
MDANSDGKVTFDEFKAAMQRDSSLQDVVLSSLRPN*

Transcript Sequence

Transcript ID

PGSC0003DMT400070801
Transcript Infomation

pacid=37437503 locus=PGSC0003DMG400027527 ID=PGSC0003DMT400070801.v4.03 annot-version=v4.03
Sequence

ATGGGAGAAAAGGATGTAATACGAACAAGTTTAAGTGATGAATACGAAGTGACAGATATT
TTAGGACGAGGAGGATTTTCAGTAGTAAGGAGAGGAAAAAATAGAAGAACAAATGAAGTT
GTTGCAATCAAGACTCTCCGGCGGTACGGGGCAGTACCGCCGGAGAAGAAAGAAAATAAT
AATAATAATAAGTCGTCAAGAGTAGTACCAGCTTTGATATGTGAGACTTTATTGACAAAT
GAATTGTTAGTGATGAGGAAGATCGTTGAAGATGTTTCTCCTCATCCTAATGTTATTCAT
TTATACGATGTTTGTGACGATTCTTTTGGTGTTCATCTTATATTGGAGCTTTGTTCTGGT
GGCGAGCTATTTGATCGGATTGTTGGACAAGCAAGGTATAACGAGGCCGGGGCTGCTGCA
GTGGTGAGACAAATAGCTAAAGGACTTGAGGCGTTACATGGGGCAAATATAGTTCATAGG
GACTTGAAACCAGAAAACTGTTTATTTTTAAACAAAGATGAGAATTCACCATTGAAGATC
ATGGACTTTGGTCTTAGCTCTTTTGAGGATTTTGCTAATCCAGTGGTTGGTTTATTTGGT
TCAATTGATTATGTTTCACCAGAAGCACTTTCAAGGGATAAAATCACTACTAAGACTGAT
ATTTGGTCACTTGGTGTTATTCTTTACATTCTTCTTTCCGGGTACCCACCTTTCTTCGCA
CCGTCCAATCGTCAAAAGCAACAAATGATATTAAATGGACAATTCAGTTTTGATGAGAAA
ACATGGAAGAATATATCTTCATCAGCAAAACAACTAATTTCCAATCTTTTAAAAGTTGAT
CCCAACATGAGGCCTACTGCTCAACAGATAGTAGAAGATGCATGGGTGAGGGGAGAGTTA
GCAAAGGAAGAAGAAATGGACGCTGAAATTGTTTCCCGTCTTCAAAGCTTCAACGCGCTG
CGCAAGTTCCGTGCAGCAGCCATGGCTAGTGTTCTCAGCAGCAGTTTTTCTTTGAGAACT
AAAAAATTGAAGAAATTAGTTGGTTCCTCATATGATCTCAAGCCTGAAGAATTAGAAAAC
TTGAGTCACATTTTCAAGAAAATATGCAAAAATGGAGAAAATGCAACATTGTTGGAGTTT
GAAGAGGTGTTAAAAGCAATGGAAATGACATCATTAGTGGGATTAGCAGAGAGGATATTT
GATCTATTTGATAACAATCGTGATGGAACGGTAGATATGAGAGAGATAATAGGTGGCTTC
TCTAGTCTTAAGTATTCACAAGGGGATGATGCACTTCGTCTTTGTTTTCAGATGTATGAT
ACTGATCGATCAGGCTGCATTAGCAAGGAAGAAGTTGCATCCATGTTGAGAGCACTTCCT
GAAGATTGTCTTCCAATGGATATAACAGAACCTGGAAAGCTTGATGAGATATTTGATTTA
ATGGATGCAAATAGTGATGGTAAAGTCACTTTTGATGAGTTTAAAGCTGCTATGCAAAGA
GATAGTTCACTTCAAGATGTTGTACTCTCCTCACTTCGTCCTAATTAA