Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400070777
CDS Infomation

pacid=37440697 polypeptide=PGSC0003DMP400047845 locus=PGSC0003DMG400027519 ID=PGSC0003DMT400070777.v4.03 annot-version=v4.03
Sequence

ATGGATGTAATGGGGGACTATAGTAAAGGAAAAATTAAAGGTCCTATTAGTATAACATCA
GCTTTAACTTCAGCATTTCTTGAATGGTTGCTCATGATTTTTCTGTTTATTGACGGTGGT
TTCGCCTACTTAGTCACGAAATTTGCCCAGTATTGCCAATTGCAAGTTCCATGTTTGCTT
TGCTCGAGGCTGGATCATGTTCTTGGCAAGGAAAGAGCTGGATTTTACTGGGAATTAATC
TGCCCCAATCATAAGTATAGGATATCTTCATTAGTTCTTTGTCATAATCACAATAACCTT
GTTGATGTTCATGGGATGTGTGAGAGTTGCCTTTTCTCGTTTGCCACAGTAAATAAGTCG
AATGCTGAAACCTACCGATTGCTGGTTGGAAAACTGGGGGCAGAGCCTCACCTAACTGAT
GAGGATCCTTTACTCGAGGAGAAAACAAAGAGTTCGTCAGGAGTAAGAAAATGTTATTGT
TGTAAAGAGGAATTTGTTACCGGAGGATATGCTAAAAAATTGTTCAAGATTACATCTTTG
TGTGCTGACACAGTTGAACTCGATGCACCTTTGTCTGTGACTAATGGACAAGAGAGGGGT
GACAGCAAGGAGATTGAAAATGAGGCATCGACATCAGTCTTTGTTCCTTCACCTCATTTG
GAGTACAAAAAGGTAAAGGTTATCTCTGATTCTGAATCAGAGGCTGCACACTCGGATAGT
GATAGTGCTAGTCCTCTAATCCGTGCAAGGGACTATTCCTTAGACTATTTATCTGATAGA
TGCTTGCATCCAGAACCTCAAATTTTTACCGTCACTGATGACTTTGCTACCGAGAAACTA
ATACATTCGGCTTCAGTGCCTGAACCATCACTTCTGGATCCAGAAATAGACTTAATGACT
AGAGATTTTTCGGCTATTGCAACCTCGGCTGCAGTTGTTGGGCTTGGATCAGAGGAAGTT
AGCTGGCAGCAACCTGAACGGAAGACTGATGCATCTGTCCCATCTGATCTCATAAGTTTT
GATGAAGTCAACCCGTTGTCCAATGTCAAGGAAAATCTTGTTGATCTAGCAAGAGAGACC
TCAGCAGGTGAGACGGTCTACCAAGTTGTCGAAGATTGTGGGGAAGTCTCCAGGTCAAAA
AGTGATGAGATCCCAAAGAGCGAGACAGAATTGGATTCTAAACCAGAGCCAAATGAGAGT
AGTTCACAGACAGATGATGCTTTTGATCTAGGTGATGCTTATAAGCTGGCTGTTGGAAAC
AAAGGGAGGCAATTATCCGGGAAGTTTTTGGAGCAGAGGTCATTCAAGGATTCTACACGA
ATGAGTGAAGATCTAAAGGTTCTACTTACACAACTGTCTGCTGCTCGTGGTACTGATTCT
ATATTGAGTGAGATGAGCCCGAGGGTGTCTGTAAATGGTGAGGAATTTAGAACTCTTGAA
GCATCTAGCTCTATTGGAATGCAGATACTTCATCAAAGGATCTCGCTCGAGAGAAATGAA
TCTGGTTTATCTCTGGAGGGAAGCACAGTGAGTGAAATTGAAGGTGAGAGTGTGTCTGAT
CGTTTGAAACGACAGGTGGAGTATGATAGAAAATTAATGGCTGCTCTCTATAGAGAGTTG
GAGGAAGAGAGAAATGCATCCTCAGTTGCTGCAAATCAGGCGATGGCAATGATTACAAGA
TTGCAAGAGGAGAAGGCAGCACTACACATGGAAGCTTTGCAGTGCCTAAGAATGATGGAA
GAACAAGCTGAATATGACAACGAAGCACTGCAGAATTCAAATGATCTTCTTGCGCAGAAG
GAGAAAGAGATCCAAGATTTTGAAACTAAACTTGAACTTTACAAGAAGAAACTTGGGAAT
ATGGCTCTCTTTGAGGATGCACTCGAGGCAAGTTATGATTCAAATAAAGCTAAGCAAGCT
GATACAATGTGCAGTGATGACAGTTCGACTGTTCCTGGCGACGTAATTGCTCATAATCCC
ACCAGCAGCAGTAGAAGTGGTGAGGTCTTGACACCATTGGGAGTGGATAACATAGATAAC
GGGAGCCCCTTGCTTGATTTGGAAAGTGAAAGGGAGCAACTTGTGCTTTGTTTGAACAAA
TTGGAAGAAAGGCTCCTTTTGCTCTCTAAGCATGAGGCTAGTCAAGAGTTAGCTAATGTT
AACTGCGAGTTTTCAACAGAAGAATGGGTTGAAGTAAGTAATCCGAAAGAATTGGACCAT
AGGGAGTCTTCTAGAAGTAATGGTGAAATAGAGGAAAATGTTCCCCTAGAGTCAATCACA
GACAGAAGCCCTTCTGGTGAAGAAGGATCTATTAGCAAGTTTCCAGAATCACTACAGAAA
GGAAGGGATGGGAGCAAATCTGGGCAGTGCACTAATGGAGATTCTGAGTTAGAGAGTCTG
AAAAATGAGTTATCAGTTTTGAGCAGCAGACTGGAAGCACTTGGTATAGAACATAGCTTT
CTTGATCATTCTATCAACTCATTGAGGAATGGAGACGAGGGACATCAATTGATTGAAGAG
CTAGCTGGTCACTTGCGACAGTTGCATTTTGTTTTGGATAGATCAAGCGGTGAACTTGCG
CATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400047845
PEP Infomation

pacid=37440697 transcript=PGSC0003DMT400070777 locus=PGSC0003DMG400027519 ID=PGSC0003DMT400070777.v4.03 annot-version=v4.03
Sequence

MDVMGDYSKGKIKGPISITSALTSAFLEWLLMIFLFIDGGFAYLVTKFAQYCQLQVPCLL
CSRLDHVLGKERAGFYWELICPNHKYRISSLVLCHNHNNLVDVHGMCESCLFSFATVNKS
NAETYRLLVGKLGAEPHLTDEDPLLEEKTKSSSGVRKCYCCKEEFVTGGYAKKLFKITSL
CADTVELDAPLSVTNGQERGDSKEIENEASTSVFVPSPHLEYKKVKVISDSESEAAHSDS
DSASPLIRARDYSLDYLSDRCLHPEPQIFTVTDDFATEKLIHSASVPEPSLLDPEIDLMT
RDFSAIATSAAVVGLGSEEVSWQQPERKTDASVPSDLISFDEVNPLSNVKENLVDLARET
SAGETVYQVVEDCGEVSRSKSDEIPKSETELDSKPEPNESSSQTDDAFDLGDAYKLAVGN
KGRQLSGKFLEQRSFKDSTRMSEDLKVLLTQLSAARGTDSILSEMSPRVSVNGEEFRTLE
ASSSIGMQILHQRISLERNESGLSLEGSTVSEIEGESVSDRLKRQVEYDRKLMAALYREL
EEERNASSVAANQAMAMITRLQEEKAALHMEALQCLRMMEEQAEYDNEALQNSNDLLAQK
EKEIQDFETKLELYKKKLGNMALFEDALEASYDSNKAKQADTMCSDDSSTVPGDVIAHNP
TSSSRSGEVLTPLGVDNIDNGSPLLDLESEREQLVLCLNKLEERLLLLSKHEASQELANV
NCEFSTEEWVEVSNPKELDHRESSRSNGEIEENVPLESITDRSPSGEEGSISKFPESLQK
GRDGSKSGQCTNGDSELESLKNELSVLSSRLEALGIEHSFLDHSINSLRNGDEGHQLIEE
LAGHLRQLHFVLDRSSGELAH*

Transcript Sequence

Transcript ID

PGSC0003DMT400070777
Transcript Infomation

pacid=37440697 locus=PGSC0003DMG400027519 ID=PGSC0003DMT400070777.v4.03 annot-version=v4.03
Sequence

ATGGATGTAATGGGGGACTATAGTAAAGGAAAAATTAAAGGTCCTATTAGTATAACATCA
GCTTTAACTTCAGCATTTCTTGAATGGTTGCTCATGATTTTTCTGTTTATTGACGGTGGT
TTCGCCTACTTAGTCACGAAATTTGCCCAGTATTGCCAATTGCAAGTTCCATGTTTGCTT
TGCTCGAGGCTGGATCATGTTCTTGGCAAGGAAAGAGCTGGATTTTACTGGGAATTAATC
TGCCCCAATCATAAGTATAGGATATCTTCATTAGTTCTTTGTCATAATCACAATAACCTT
GTTGATGTTCATGGGATGTGTGAGAGTTGCCTTTTCTCGTTTGCCACAGTAAATAAGTCG
AATGCTGAAACCTACCGATTGCTGGTTGGAAAACTGGGGGCAGAGCCTCACCTAACTGAT
GAGGATCCTTTACTCGAGGAGAAAACAAAGAGTTCGTCAGGAGTAAGAAAATGTTATTGT
TGTAAAGAGGAATTTGTTACCGGAGGATATGCTAAAAAATTGTTCAAGATTACATCTTTG
TGTGCTGACACAGTTGAACTCGATGCACCTTTGTCTGTGACTAATGGACAAGAGAGGGGT
GACAGCAAGGAGATTGAAAATGAGGCATCGACATCAGTCTTTGTTCCTTCACCTCATTTG
GAGTACAAAAAGGTAAAGGTTATCTCTGATTCTGAATCAGAGGCTGCACACTCGGATAGT
GATAGTGCTAGTCCTCTAATCCGTGCAAGGGACTATTCCTTAGACTATTTATCTGATAGA
TGCTTGCATCCAGAACCTCAAATTTTTACCGTCACTGATGACTTTGCTACCGAGAAACTA
ATACATTCGGCTTCAGTGCCTGAACCATCACTTCTGGATCCAGAAATAGACTTAATGACT
AGAGATTTTTCGGCTATTGCAACCTCGGCTGCAGTTGTTGGGCTTGGATCAGAGGAAGTT
AGCTGGCAGCAACCTGAACGGAAGACTGATGCATCTGTCCCATCTGATCTCATAAGTTTT
GATGAAGTCAACCCGTTGTCCAATGTCAAGGAAAATCTTGTTGATCTAGCAAGAGAGACC
TCAGCAGGTGAGACGGTCTACCAAGTTGTCGAAGATTGTGGGGAAGTCTCCAGGTCAAAA
AGTGATGAGATCCCAAAGAGCGAGACAGAATTGGATTCTAAACCAGAGCCAAATGAGAGT
AGTTCACAGACAGATGATGCTTTTGATCTAGGTGATGCTTATAAGCTGGCTGTTGGAAAC
AAAGGGAGGCAATTATCCGGGAAGTTTTTGGAGCAGAGGTCATTCAAGGATTCTACACGA
ATGAGTGAAGATCTAAAGGTTCTACTTACACAACTGTCTGCTGCTCGTGGTACTGATTCT
ATATTGAGTGAGATGAGCCCGAGGGTGTCTGTAAATGGTGAGGAATTTAGAACTCTTGAA
GCATCTAGCTCTATTGGAATGCAGATACTTCATCAAAGGATCTCGCTCGAGAGAAATGAA
TCTGGTTTATCTCTGGAGGGAAGCACAGTGAGTGAAATTGAAGGTGAGAGTGTGTCTGAT
CGTTTGAAACGACAGGTGGAGTATGATAGAAAATTAATGGCTGCTCTCTATAGAGAGTTG
GAGGAAGAGAGAAATGCATCCTCAGTTGCTGCAAATCAGGCGATGGCAATGATTACAAGA
TTGCAAGAGGAGAAGGCAGCACTACACATGGAAGCTTTGCAGTGCCTAAGAATGATGGAA
GAACAAGCTGAATATGACAACGAAGCACTGCAGAATTCAAATGATCTTCTTGCGCAGAAG
GAGAAAGAGATCCAAGATTTTGAAACTAAACTTGAACTTTACAAGAAGAAACTTGGGAAT
ATGGCTCTCTTTGAGGATGCACTCGAGGCAAGTTATGATTCAAATAAAGCTAAGCAAGCT
GATACAATGTGCAGTGATGACAGTTCGACTGTTCCTGGCGACGTAATTGCTCATAATCCC
ACCAGCAGCAGTAGAAGTGGTGAGGTCTTGACACCATTGGGAGTGGATAACATAGATAAC
GGGAGCCCCTTGCTTGATTTGGAAAGTGAAAGGGAGCAACTTGTGCTTTGTTTGAACAAA
TTGGAAGAAAGGCTCCTTTTGCTCTCTAAGCATGAGGCTAGTCAAGAGTTAGCTAATGTT
AACTGCGAGTTTTCAACAGAAGAATGGGTTGAAGTAAGTAATCCGAAAGAATTGGACCAT
AGGGAGTCTTCTAGAAGTAATGGTGAAATAGAGGAAAATGTTCCCCTAGAGTCAATCACA
GACAGAAGCCCTTCTGGTGAAGAAGGATCTATTAGCAAGTTTCCAGAATCACTACAGAAA
GGAAGGGATGGGAGCAAATCTGGGCAGTGCACTAATGGAGATTCTGAGTTAGAGAGTCTG
AAAAATGAGTTATCAGTTTTGAGCAGCAGACTGGAAGCACTTGGTATAGAACATAGCTTT
CTTGATCATTCTATCAACTCATTGAGGAATGGAGACGAGGGACATCAATTGATTGAAGAG
CTAGCTGGTCACTTGCGACAGTTGCATTTTGTTTTGGATAGATCAAGCGGTGAACTTGCG
CATTAA