Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400070772
CDS Infomation

pacid=37438833 polypeptide=PGSC0003DMP400047840 locus=PGSC0003DMG400027516 ID=PGSC0003DMT400070772.v4.03 annot-version=v4.03
Sequence

ATGGCTATTTCCATGAGGAATCTTGAAAAAGTTGCAATCTTTAAGCCTTCTGCGCACACA
ATTCCACTGCTCAACTTCAATGGCCATCAACTCCTCAACAGCGCCGCCACCCAGTTATCC
TCTCTCGATGATGACCAACAAGCTGCAAGCCTACGAGGAAGATTTAGAAGAAGAGAGCAA
GCCTTCCGTCTTCTTGGTAGCTCTCTGCCCTTGTCTCGTTTGTATCATTCTCTTGCTCAT
TGTAGTATCCATTTTTCTCATTGTCAAGTTTCATCTCTTTTGCCACACCCCACTTCACTC
TGTTTTTTTCAAGAAAAGTTGCCATTGAGTAATCCCAGAAGGATTTGGCCTCTTTTGCCA
AAAGGGTGTTTTAATTTTACTAATACTCATCCAGATGTGAAGTTTTTGGAGTTGAATACT
AAGCAATTTAGCACTGTACAAACTTCACTCTGTACATCGTTATTTAGTAATTCCAGAAAG
ATATGGCCTTTTTCATCAAAAGGGTATTTTTATTGTACTGGTATTAATTCGAATTTGAAG
TTGAGTTTTAGGGGAATTTGTAGTTGTGTTGATAATGATGGTGAATTAGAAAGTGATAAT
GATGTTGAGAATGAGAGTGATGAGAGGGTGGCGGTGTCGAAGGCGGATCCTAAAGAGGTG
GATAGGGTGTGTAAGGTTATTGATGAGTTGTTTTCGTTAGATCGGAATATGGAGGCTGTT
TTGGATGAATGTGGGATCAATTTAAGCCATGATTTGGTAGTAGATGTGTTGGAGAGGTTC
AAGCATGCTAGAAAACCAGCATTCAGATTCTTTTGTTGGGCGGCTCAGAGGCCAGGGTAT
GCTCATGATTCAAGAACGTATAATGCAATGATGGCAATACTTGGAAAGACGAGGCAGTTT
GAGACTATGGTTTCGGTTCTTGAAGAAATGGGGGAGAAAGGTTTGCTTACAATGGAGGCA
TTTTTGATCTCCATGAAAGCATTTGCTGCAGCAAAAGAGCGGAAGAAAGCTATTGGGATG
TTTGAGTTGATGAAGAAGTACAAGTTTAAAGTTGGGGTGGAGACAATTAATTGTTTACTT
GATGCCCTGGGAAGGGCAAAGCTTGGGAAAGAAGCGCAATTATTGTTTGAGAAATTGGAG
CATAGATTCACACCAAATTTACTAACATATACAGTTTTGCTCAATGGATGGTGTAGGGTA
AAGAATCTGATGGATGCGGGTAAAGTGTGGAATGAGATGATTGATAAGGGTTTTAAGCCT
GATATTGTCGCCCATAACACAATGTTGGAAGGGCTGTTAAAGTGTAAAAAAAGGTCTGAT
GCGATCAAGCTGTTTGAGGTTATGAAAGCAAAGGGTCCATCGCCTAATACAAGAAGTTAT
ACGATCTTGATCCGGGATTTGTGTAAGCAGGGTAAGATGGATGAAGCAGTTGCCGGTTTT
GAGGAAATGCTTAGCTCTGGATGTGAGGCAGATGCTGCAACTTTTACCTGTTTGGTAACA
GGCTTTGGAAATAAAAAGAAGATGGATAAAGTCTTTGCATTGCTGAGGGAGATGAAGGAA
AAAGGATGCCCACCTGATGCAAGACTGTATAATGCACTGATCAAATTAATAATAAATCGA
CGAATGCCAGATGATGCGGTTACTTTATACAAAAAGATGATCCGAAATGGAATTCAACCT
ACTATTCACACTTACAATATGTTGATGAAATCATTCTTCATGACAAAGAACTATGACATG
GCTCATGCAACTTGGGAGGAAATGAGCCTGAGGGGTTGCTGTCCAGATGAAAATTCTTAC
ACCGTCTTCATTGGAGGGCTTATAGGGCAAGGACGATCTATGGAGGCTTGTAAATACTTG
GAGGAAATGATAGACAAAGGCATGAAAGCACCTCAACTTGACTACAACAAATTTGCTGCT
GATTTTTCTCGGGGTGGTAGGCCTGATATACTGGAGGAGTTGGCTAAGAGGATGAAATTC
TCTGGGAAGTTTGAGGTCTCAAGTCTCTTTGCTAGATGGGCTGAAATGATGAAGAGTAGA
GTAAAGCGTAGGGATCCCAGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400047840
PEP Infomation

pacid=37438833 transcript=PGSC0003DMT400070772 locus=PGSC0003DMG400027516 ID=PGSC0003DMT400070772.v4.03 annot-version=v4.03
Sequence

MAISMRNLEKVAIFKPSAHTIPLLNFNGHQLLNSAATQLSSLDDDQQAASLRGRFRRREQ
AFRLLGSSLPLSRLYHSLAHCSIHFSHCQVSSLLPHPTSLCFFQEKLPLSNPRRIWPLLP
KGCFNFTNTHPDVKFLELNTKQFSTVQTSLCTSLFSNSRKIWPFSSKGYFYCTGINSNLK
LSFRGICSCVDNDGELESDNDVENESDERVAVSKADPKEVDRVCKVIDELFSLDRNMEAV
LDECGINLSHDLVVDVLERFKHARKPAFRFFCWAAQRPGYAHDSRTYNAMMAILGKTRQF
ETMVSVLEEMGEKGLLTMEAFLISMKAFAAAKERKKAIGMFELMKKYKFKVGVETINCLL
DALGRAKLGKEAQLLFEKLEHRFTPNLLTYTVLLNGWCRVKNLMDAGKVWNEMIDKGFKP
DIVAHNTMLEGLLKCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDLCKQGKMDEAVAGF
EEMLSSGCEADAATFTCLVTGFGNKKKMDKVFALLREMKEKGCPPDARLYNALIKLIINR
RMPDDAVTLYKKMIRNGIQPTIHTYNMLMKSFFMTKNYDMAHATWEEMSLRGCCPDENSY
TVFIGGLIGQGRSMEACKYLEEMIDKGMKAPQLDYNKFAADFSRGGRPDILEELAKRMKF
SGKFEVSSLFARWAEMMKSRVKRRDPS*

Transcript Sequence

Transcript ID

PGSC0003DMT400070772
Transcript Infomation

pacid=37438833 locus=PGSC0003DMG400027516 ID=PGSC0003DMT400070772.v4.03 annot-version=v4.03
Sequence

ATGGCTATTTCCATGAGGAATCTTGAAAAAGTTGCAATCTTTAAGCCTTCTGCGCACACA
ATTCCACTGCTCAACTTCAATGGCCATCAACTCCTCAACAGCGCCGCCACCCAGTTATCC
TCTCTCGATGATGACCAACAAGCTGCAAGCCTACGAGGAAGATTTAGAAGAAGAGAGCAA
GCCTTCCGTCTTCTTGGTAGCTCTCTGCCCTTGTCTCGTTTGTATCATTCTCTTGCTCAT
TGTAGTATCCATTTTTCTCATTGTCAAGTTTCATCTCTTTTGCCACACCCCACTTCACTC
TGTTTTTTTCAAGAAAAGTTGCCATTGAGTAATCCCAGAAGGATTTGGCCTCTTTTGCCA
AAAGGGTGTTTTAATTTTACTAATACTCATCCAGATGTGAAGTTTTTGGAGTTGAATACT
AAGCAATTTAGCACTGTACAAACTTCACTCTGTACATCGTTATTTAGTAATTCCAGAAAG
ATATGGCCTTTTTCATCAAAAGGGTATTTTTATTGTACTGGTATTAATTCGAATTTGAAG
TTGAGTTTTAGGGGAATTTGTAGTTGTGTTGATAATGATGGTGAATTAGAAAGTGATAAT
GATGTTGAGAATGAGAGTGATGAGAGGGTGGCGGTGTCGAAGGCGGATCCTAAAGAGGTG
GATAGGGTGTGTAAGGTTATTGATGAGTTGTTTTCGTTAGATCGGAATATGGAGGCTGTT
TTGGATGAATGTGGGATCAATTTAAGCCATGATTTGGTAGTAGATGTGTTGGAGAGGTTC
AAGCATGCTAGAAAACCAGCATTCAGATTCTTTTGTTGGGCGGCTCAGAGGCCAGGGTAT
GCTCATGATTCAAGAACGTATAATGCAATGATGGCAATACTTGGAAAGACGAGGCAGTTT
GAGACTATGGTTTCGGTTCTTGAAGAAATGGGGGAGAAAGGTTTGCTTACAATGGAGGCA
TTTTTGATCTCCATGAAAGCATTTGCTGCAGCAAAAGAGCGGAAGAAAGCTATTGGGATG
TTTGAGTTGATGAAGAAGTACAAGTTTAAAGTTGGGGTGGAGACAATTAATTGTTTACTT
GATGCCCTGGGAAGGGCAAAGCTTGGGAAAGAAGCGCAATTATTGTTTGAGAAATTGGAG
CATAGATTCACACCAAATTTACTAACATATACAGTTTTGCTCAATGGATGGTGTAGGGTA
AAGAATCTGATGGATGCGGGTAAAGTGTGGAATGAGATGATTGATAAGGGTTTTAAGCCT
GATATTGTCGCCCATAACACAATGTTGGAAGGGCTGTTAAAGTGTAAAAAAAGGTCTGAT
GCGATCAAGCTGTTTGAGGTTATGAAAGCAAAGGGTCCATCGCCTAATACAAGAAGTTAT
ACGATCTTGATCCGGGATTTGTGTAAGCAGGGTAAGATGGATGAAGCAGTTGCCGGTTTT
GAGGAAATGCTTAGCTCTGGATGTGAGGCAGATGCTGCAACTTTTACCTGTTTGGTAACA
GGCTTTGGAAATAAAAAGAAGATGGATAAAGTCTTTGCATTGCTGAGGGAGATGAAGGAA
AAAGGATGCCCACCTGATGCAAGACTGTATAATGCACTGATCAAATTAATAATAAATCGA
CGAATGCCAGATGATGCGGTTACTTTATACAAAAAGATGATCCGAAATGGAATTCAACCT
ACTATTCACACTTACAATATGTTGATGAAATCATTCTTCATGACAAAGAACTATGACATG
GCTCATGCAACTTGGGAGGAAATGAGCCTGAGGGGTTGCTGTCCAGATGAAAATTCTTAC
ACCGTCTTCATTGGAGGGCTTATAGGGCAAGGACGATCTATGGAGGCTTGTAAATACTTG
GAGGAAATGATAGACAAAGGCATGAAAGCACCTCAACTTGACTACAACAAATTTGCTGCT
GATTTTTCTCGGGGTGGTAGGCCTGATATACTGGAGGAGTTGGCTAAGAGGATGAAATTC
TCTGGGAAGTTTGAGGTCTCAAGTCTCTTTGCTAGATGGGCTGAAATGATGAAGAGTAGA
GTAAAGCGTAGGGATCCCAGCTGA