Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400070749
CDS Infomation

pacid=37437550 polypeptide=PGSC0003DMP400047823 locus=PGSC0003DMG400027505 ID=PGSC0003DMT400070749.v4.03 annot-version=v4.03
Sequence

ATGTCCACTGTTCAAAGAAGGCAGCAAACTGTAGATGTTCCGAAGGAAAATGGAGGTGCT
AGAGTACAGCAACAACAACTCCCAGATGTTATGCAGTCAAGGGGTGGTAAGATGTCCTCC
AGGCCTGACACCCCTTCAGTGACAGGTACTGCTAGGATTATCCCATCTAGATATAGGCAA
ACTCCTCAGTCTGTACTCCGTTCTAGTTCAACGAGTAATCCTGGATATGCATCGGTCAGT
GCTGCTGCTAAACTTTTGCAGGAGGTTACGGGTACTCCTATAAATCCTTGTGCAGTGTCC
TGTGGTGATGGAGCAATTGTCCATAAAAAGTTCTCGAAAGTTTCAACAAGCAATGCTGTA
GATGGCTGTGCTGTTGCTACTGAGAGCACTTCATGCCCGAATTCTCCAGTCTGCACTCAG
AGAAAGCAGCAGCACATTAAAGTTCCCAAGGACAATGGAGGCACCAGAGCACTTCAACAA
CAACTTGCAGATGCTTTGCAGTCAAAAAGTAGTAAGATCCCCTCAAGACTTGACACACCT
ACCGTGACTGGTGCTTCTAGGGTTGTTCCATCTAGATATAAGTTCACTCCTCAGTCTTTG
AACCGTCACTGTCCAACCAATACTCCTGGAGGAGCAATCAGTGCGGCTGATAAACTATTG
CGGGAGATTACTGCTACACCTATAAATCCTTGTTCGGTGTCGCAGGATGATGGAGCATTA
ATCTCCAGAAAGCTTTCAAAAGTTTCAACTAGTCCTTATGTGGATTCTTGTGCCACTGGT
ACTGCTACTACTAAGGGAAGTTCATGCCCGAGTTCTCCACTTTGCACTCAAAACAATAAG
ACGCGGATGTTATCAGCAATGAGGTCTTCTATGTCCGAGATTGATAGATGTCTTACGGAG
AGAAATAGAGACAGTTCAGTTGATGAATGCAGTTCATATAAATCTGCATCTTCTACTTGC
GCTCGTTCACTGCATTTGCCAACAGCCAATAACGAAAACTCCTCTTCTTGGCTATCTCTT
AAACAAAATGACATGTTTGCTTCTAGATCATCTTTCAAAATGGGGAGCCTTTGCTTGCCT
CCACATCCAACTTCCAATAAATTGGGAGCAGATGCTAGGAAAGGAAGGAAGGGTTTCAGT
GATCAGGGAGATGTGCATTCATTGAAGTTGCTCTACAACCATCACCTTCAGTGGCGATTT
GCAAATGCCAAAGCGGAGGCCTCCATGCACACCCAAAGACATGATAGCCAGAGCAAACTT
TATTCCTTTGCACAACAGTTATCAGATCTACGCAAATCTGTAAGCCAGAAACGCGCTGAA
CTTGGGGTTTTGAGAAGGATCAAAACTTTATCCACTATTCTTGAATCACAATTACCATGT
CTTGGTGAATGGGCTAACCTGGAAGAGGATTACTCAACTTCTCTGTCAGGTACAACTGAT
GCCTTGCGCAATTGCTCTCTGAGACTTCCTATTGGCACGGAAGTTCATGTTGATGTAAGA
GAGTTAGGAGATGCTCTTAGTTCATCTACAAAGGTGATGGAAATGATCGGTTTGCAAATT
CAGAACTTTATGCAAAAGGCAGAAGAAACAGAAAGTTTAATTTCTGAACTAGCTAGGGTG
AGTGGTGGAGAGAAAGCTCTTGTCGAGGAATGTGGGGATTTATTAATGAAGACATATATC
TCAGAGGTGACAGAATGGAGTTTAAGGGGACAGATGATTCAAATGCATCAGAACAACCTT
TATCATCAAGTTCAGAAAGAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400047823
PEP Infomation

pacid=37437550 transcript=PGSC0003DMT400070749 locus=PGSC0003DMG400027505 ID=PGSC0003DMT400070749.v4.03 annot-version=v4.03
Sequence

MSTVQRRQQTVDVPKENGGARVQQQQLPDVMQSRGGKMSSRPDTPSVTGTARIIPSRYRQ
TPQSVLRSSSTSNPGYASVSAAAKLLQEVTGTPINPCAVSCGDGAIVHKKFSKVSTSNAV
DGCAVATESTSCPNSPVCTQRKQQHIKVPKDNGGTRALQQQLADALQSKSSKIPSRLDTP
TVTGASRVVPSRYKFTPQSLNRHCPTNTPGGAISAADKLLREITATPINPCSVSQDDGAL
ISRKLSKVSTSPYVDSCATGTATTKGSSCPSSPLCTQNNKTRMLSAMRSSMSEIDRCLTE
RNRDSSVDECSSYKSASSTCARSLHLPTANNENSSSWLSLKQNDMFASRSSFKMGSLCLP
PHPTSNKLGADARKGRKGFSDQGDVHSLKLLYNHHLQWRFANAKAEASMHTQRHDSQSKL
YSFAQQLSDLRKSVSQKRAELGVLRRIKTLSTILESQLPCLGEWANLEEDYSTSLSGTTD
ALRNCSLRLPIGTEVHVDVRELGDALSSSTKVMEMIGLQIQNFMQKAEETESLISELARV
SGGEKALVEECGDLLMKTYISEVTEWSLRGQMIQMHQNNLYHQVQKE*

Transcript Sequence

Transcript ID

PGSC0003DMT400070749
Transcript Infomation

pacid=37437550 locus=PGSC0003DMG400027505 ID=PGSC0003DMT400070749.v4.03 annot-version=v4.03
Sequence

ATGTCCACTGTTCAAAGAAGGCAGCAAACTGTAGATGTTCCGAAGGAAAATGGAGGTGCT
AGAGTACAGCAACAACAACTCCCAGATGTTATGCAGTCAAGGGGTGGTAAGATGTCCTCC
AGGCCTGACACCCCTTCAGTGACAGGTACTGCTAGGATTATCCCATCTAGATATAGGCAA
ACTCCTCAGTCTGTACTCCGTTCTAGTTCAACGAGTAATCCTGGATATGCATCGGTCAGT
GCTGCTGCTAAACTTTTGCAGGAGGTTACGGGTACTCCTATAAATCCTTGTGCAGTGTCC
TGTGGTGATGGAGCAATTGTCCATAAAAAGTTCTCGAAAGTTTCAACAAGCAATGCTGTA
GATGGCTGTGCTGTTGCTACTGAGAGCACTTCATGCCCGAATTCTCCAGTCTGCACTCAG
AGAAAGCAGCAGCACATTAAAGTTCCCAAGGACAATGGAGGCACCAGAGCACTTCAACAA
CAACTTGCAGATGCTTTGCAGTCAAAAAGTAGTAAGATCCCCTCAAGACTTGACACACCT
ACCGTGACTGGTGCTTCTAGGGTTGTTCCATCTAGATATAAGTTCACTCCTCAGTCTTTG
AACCGTCACTGTCCAACCAATACTCCTGGAGGAGCAATCAGTGCGGCTGATAAACTATTG
CGGGAGATTACTGCTACACCTATAAATCCTTGTTCGGTGTCGCAGGATGATGGAGCATTA
ATCTCCAGAAAGCTTTCAAAAGTTTCAACTAGTCCTTATGTGGATTCTTGTGCCACTGGT
ACTGCTACTACTAAGGGAAGTTCATGCCCGAGTTCTCCACTTTGCACTCAAAACAATAAG
ACGCGGATGTTATCAGCAATGAGGTCTTCTATGTCCGAGATTGATAGATGTCTTACGGAG
AGAAATAGAGACAGTTCAGTTGATGAATGCAGTTCATATAAATCTGCATCTTCTACTTGC
GCTCGTTCACTGCATTTGCCAACAGCCAATAACGAAAACTCCTCTTCTTGGCTATCTCTT
AAACAAAATGACATGTTTGCTTCTAGATCATCTTTCAAAATGGGGAGCCTTTGCTTGCCT
CCACATCCAACTTCCAATAAATTGGGAGCAGATGCTAGGAAAGGAAGGAAGGGTTTCAGT
GATCAGGGAGATGTGCATTCATTGAAGTTGCTCTACAACCATCACCTTCAGTGGCGATTT
GCAAATGCCAAAGCGGAGGCCTCCATGCACACCCAAAGACATGATAGCCAGAGCAAACTT
TATTCCTTTGCACAACAGTTATCAGATCTACGCAAATCTGTAAGCCAGAAACGCGCTGAA
CTTGGGGTTTTGAGAAGGATCAAAACTTTATCCACTATTCTTGAATCACAATTACCATGT
CTTGGTGAATGGGCTAACCTGGAAGAGGATTACTCAACTTCTCTGTCAGGTACAACTGAT
GCCTTGCGCAATTGCTCTCTGAGACTTCCTATTGGCACGGAAGTTCATGTTGATGTAAGA
GAGTTAGGAGATGCTCTTAGTTCATCTACAAAGGTGATGGAAATGATCGGTTTGCAAATT
CAGAACTTTATGCAAAAGGCAGAAGAAACAGAAAGTTTAATTTCTGAACTAGCTAGGGTG
AGTGGTGGAGAGAAAGCTCTTGTCGAGGAATGTGGGGATTTATTAATGAAGACATATATC
TCAGAGGTGACAGAATGGAGTTTAAGGGGACAGATGATTCAAATGCATCAGAACAACCTT
TATCATCAAGTTCAGAAAGAATGA