Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400070680
CDS Infomation

pacid=37432147 polypeptide=PGSC0003DMP400047781 locus=PGSC0003DMG400027475 ID=PGSC0003DMT400070680.v4.03 annot-version=v4.03
Sequence

ATGGGCATAATCAGAGAAGCCCCCAATTGTTTTCCCGGAGGATGGAACACCGGCGCGGCG
GCTCAGATGGCGAAGTCGTGTGAGTATTGCCACTTGGCTGCCGCACTGGTGTTCTGTCGC
ACGGACAACACGTTCGTGTGCCTGTCGTGCGACACTCGCTTGCACGCCCACCATGAGCGT
GTGTGGGTGTGCGAGGTCTGCGAGCAGGCGGCGGCTAGTGTGACCTGCAGGGCTGATGCG
GCTGCACTATGCGTCGCGTGCGACCGCGACATCCACTCGGCCAACCCGCTCGCCCAGCGC
CACGAGCGGGTTCCCGTGGTCCCGTTTTACGACCCGGTGGAATCGGTCGTGAAGTCCACC
GCCGCCACACTCCTCGTCTCGATCACCGATACCACGACCACAACCATGACCACGACCACG
GGCATAGCCCCTGCCTTGAGTAAAGTAGATGCTTGTATTGGACACCATGACAACAACAAT
GATCCATGGATTCCACCAAACACAATCACATCAAAACTACCATTAACCACAGAAATGAAA
GCAATGGATTTCATATTCACAGATTCAGAAAACTTTCTTGATTTTGATTATCCTGTTTCT
GTAGACACACAATCTCAACCTCATTACAATTCAGCAAATGATAGTGTTGTACCAGTACAA
ACTAATACTGCAATAAAATCATTGCCATTTCATCATCAAGAGAAACATTTTGAGATTGAT
TTCACTCAATCACACATCAAATCTTACAACACCCCATCACTCAGTGTGTCTTCGTCTTCT
TTAGATGTTGGAATTGTACCAGATGGAAGCTCAATTTCAGAAATATCATACCCATATATG
AGAACTATGAATAACAGCAACAGCAGTATTGATTTATCTAATTCTGCAAATCATCAAGGT
GAAAAATTACTGGGTTTAGATAGAGAAGCAAGAGTTTTGCGATACAGAGAGAAGAAAAAA
AACAGAAAATTCGAGAAAACTATTCGTTATGCTTCAAGAAAAGCTTATGCTGAAACAAGG
CCAAGAATTAAAGGTCGATTTGCTAAAAGAACAGACGGCGGCGCCGGCGAGTTTGATGAC
GTTGACGGGATTTTCTCCGGCGCCGAATTCATTGCGGCAGACTCACGATACGGCGTCGTT
CCTTCGTTTTTAACTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400047781
PEP Infomation

pacid=37432147 transcript=PGSC0003DMT400070680 locus=PGSC0003DMG400027475 ID=PGSC0003DMT400070680.v4.03 annot-version=v4.03
Sequence

MGIIREAPNCFPGGWNTGAAAQMAKSCEYCHLAAALVFCRTDNTFVCLSCDTRLHAHHER
VWVCEVCEQAAASVTCRADAAALCVACDRDIHSANPLAQRHERVPVVPFYDPVESVVKST
AATLLVSITDTTTTTMTTTTGIAPALSKVDACIGHHDNNNDPWIPPNTITSKLPLTTEMK
AMDFIFTDSENFLDFDYPVSVDTQSQPHYNSANDSVVPVQTNTAIKSLPFHHQEKHFEID
FTQSHIKSYNTPSLSVSSSSLDVGIVPDGSSISEISYPYMRTMNNSNSSIDLSNSANHQG
EKLLGLDREARVLRYREKKKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTDGGAGEFDD
VDGIFSGAEFIAADSRYGVVPSFLT*

Transcript Sequence

Transcript ID

PGSC0003DMT400070680
Transcript Infomation

pacid=37432147 locus=PGSC0003DMG400027475 ID=PGSC0003DMT400070680.v4.03 annot-version=v4.03
Sequence

ATGGGCATAATCAGAGAAGCCCCCAATTGTTTTCCCGGAGGATGGAACACCGGCGCGGCG
GCTCAGATGGCGAAGTCGTGTGAGTATTGCCACTTGGCTGCCGCACTGGTGTTCTGTCGC
ACGGACAACACGTTCGTGTGCCTGTCGTGCGACACTCGCTTGCACGCCCACCATGAGCGT
GTGTGGGTGTGCGAGGTCTGCGAGCAGGCGGCGGCTAGTGTGACCTGCAGGGCTGATGCG
GCTGCACTATGCGTCGCGTGCGACCGCGACATCCACTCGGCCAACCCGCTCGCCCAGCGC
CACGAGCGGGTTCCCGTGGTCCCGTTTTACGACCCGGTGGAATCGGTCGTGAAGTCCACC
GCCGCCACACTCCTCGTCTCGATCACCGATACCACGACCACAACCATGACCACGACCACG
GGCATAGCCCCTGCCTTGAGTAAAGTAGATGCTTGTATTGGACACCATGACAACAACAAT
GATCCATGGATTCCACCAAACACAATCACATCAAAACTACCATTAACCACAGAAATGAAA
GCAATGGATTTCATATTCACAGATTCAGAAAACTTTCTTGATTTTGATTATCCTGTTTCT
GTAGACACACAATCTCAACCTCATTACAATTCAGCAAATGATAGTGTTGTACCAGTACAA
ACTAATACTGCAATAAAATCATTGCCATTTCATCATCAAGAGAAACATTTTGAGATTGAT
TTCACTCAATCACACATCAAATCTTACAACACCCCATCACTCAGTGTGTCTTCGTCTTCT
TTAGATGTTGGAATTGTACCAGATGGAAGCTCAATTTCAGAAATATCATACCCATATATG
AGAACTATGAATAACAGCAACAGCAGTATTGATTTATCTAATTCTGCAAATCATCAAGGT
GAAAAATTACTGGGTTTAGATAGAGAAGCAAGAGTTTTGCGATACAGAGAGAAGAAAAAA
AACAGAAAATTCGAGAAAACTATTCGTTATGCTTCAAGAAAAGCTTATGCTGAAACAAGG
CCAAGAATTAAAGGTCGATTTGCTAAAAGAACAGACGGCGGCGCCGGCGAGTTTGATGAC
GTTGACGGGATTTTCTCCGGCGCCGAATTCATTGCGGCAGACTCACGATACGGCGTCGTT
CCTTCGTTTTTAACTTAA