Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400070672
CDS Infomation

pacid=37433645 polypeptide=PGSC0003DMP400047776 locus=PGSC0003DMG400027471 ID=PGSC0003DMT400070672.v4.03 annot-version=v4.03
Sequence

ATGTTGATAACAGTCAGAGAAATTTCTTCTTCTTCTTCTTCTCTGTGCTTCAATTCCAAG
CAGCTACACTCTTTAAAGGTTAATAGAGTCGCCCCAATTTGTAAAGCCAGCAGCCTCAGT
TTCCATAAAAAATCCACTGCCCCATCATGGAATCTTGGTCTTTTTCAATCCACAAACAGC
TGTGATAGTTCAGTATTTGATCCATTGGGTATCAATTCAGGTAAATCATCCTGGGATAAT
TTAGTGAGCTTGCTCTCTCAGACATTTGAAAGCTCCTCAAACACTAGAAAAGAGAAAAAT
TCATCAGCTAGAGGGTTGGCAGCTGCAATTGAAGATACTAGCATTGATTTTGGAGACTTC
TTCAAAGGCCCGTTACCAGGAAAGTTTCTAAAGCTATTAGGATTTTTGGCTTTGTCACGA
CTCGGGATCTACATACCACTCGGTGGAGTAAATCGGGAGGCCTTTGTTGGCAATTTAGAT
GAGAATAGTATTTTAAGTACTTTGGATTCCTTTTCCGGTGGAGGTATAGGTCGCCTTGGA
ATCTGCTCCCTAGGTATTGTTCCCTTCATCAATGCACAAATTGTGTTTCAATTGCTTGCT
CAAATCTACCCCAAGTTGCAAGAACTTCAGAAAAGAGAAGGTGAAGCTGGAAGAAAGAAA
GTTCTCCAGTATACTCGCTATGCTTCTGTTGGATTTGCCGTAGTACAGGCAATTGGCCAA
GTATTGTTCCTTCGCCCTTATGTTAATGACTTCAGTACCCAGTGGGCAATTTCTTCCGTT
GTTCTTTTGACCCTCGGCTCAGTATTTACGACTTATATTGGGGAGCGAATCACTGATTTA
AAACTTGGAAACGGTACATCTCTTTTGATCTTTACAAATATCATCTCCTACTTGCCAGCG
TCCTTTGGTAGGACAGTCGCACAGGCCTATCAAGATGGTAATTATGTTGGGCTCGTTGGC
ATCCTAGTCTCATTCTTCCTGCTAGTCCTTAGCATTGTATATGTTCAGGAAGCAGAGAGG
AAAATTCCGCTAAATTATGCATCAAGGTATACTGGCAGAACAGGAGGAGGACTTCAAAAA
TCTGCATACTTACCGTTTAAAGTGAACAGTTCAGGAGTAATGCCGATTATTTTCTCAACA
TCATCACTAGCCCTTCCTGGCACTTTGGCACGTTTCACTGGTGTAGGTTTCCTGAGAAAG
GCTGCAGCAGGTTTAAACCCTGGAGGTTCTTTCTATCTGCCGACAAACATTTTGTTGATT
GCCTTCTTCAATTACTATTATACATTCCTGCAATTGGACCCTGATGATGTCAGTGATCAG
TTGAAACGACAAGGTGCCTCAATCCCACTTGTTCGACCGGGTAAAAGCACAGCGGCATTC
ATCAAAACGGTACTCAGCCGGATATCAGTTCTTGGTTCTGCATTTTTGGCACTTCTCGCT
GCTGGCCCTGCTGTGATTGAACAAGCCACACACCTCACTGCTTTCCGAGGCTTTGCAGGC
ACGTCAGTGCTTATTCTTGTTGGTTGTGCTACAGACACTGCAAGGAAAGTGCAGGCGGAG
ATCATATCCCAAAAATACAAGAATATAGAGTTTTATGACATTGATAATAAATATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400047776
PEP Infomation

pacid=37433645 transcript=PGSC0003DMT400070672 locus=PGSC0003DMG400027471 ID=PGSC0003DMT400070672.v4.03 annot-version=v4.03
Sequence

MLITVREISSSSSSLCFNSKQLHSLKVNRVAPICKASSLSFHKKSTAPSWNLGLFQSTNS
CDSSVFDPLGINSGKSSWDNLVSLLSQTFESSSNTRKEKNSSARGLAAAIEDTSIDFGDF
FKGPLPGKFLKLLGFLALSRLGIYIPLGGVNREAFVGNLDENSILSTLDSFSGGGIGRLG
ICSLGIVPFINAQIVFQLLAQIYPKLQELQKREGEAGRKKVLQYTRYASVGFAVVQAIGQ
VLFLRPYVNDFSTQWAISSVVLLTLGSVFTTYIGERITDLKLGNGTSLLIFTNIISYLPA
SFGRTVAQAYQDGNYVGLVGILVSFFLLVLSIVYVQEAERKIPLNYASRYTGRTGGGLQK
SAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGVGFLRKAAAGLNPGGSFYLPTNILLI
AFFNYYYTFLQLDPDDVSDQLKRQGASIPLVRPGKSTAAFIKTVLSRISVLGSAFLALLA
AGPAVIEQATHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDIDNKY*

Transcript Sequence

Transcript ID

PGSC0003DMT400070672
Transcript Infomation

pacid=37433645 locus=PGSC0003DMG400027471 ID=PGSC0003DMT400070672.v4.03 annot-version=v4.03
Sequence

ATGTTGATAACAGTCAGAGAAATTTCTTCTTCTTCTTCTTCTCTGTGCTTCAATTCCAAG
CAGCTACACTCTTTAAAGGTTAATAGAGTCGCCCCAATTTGTAAAGCCAGCAGCCTCAGT
TTCCATAAAAAATCCACTGCCCCATCATGGAATCTTGGTCTTTTTCAATCCACAAACAGC
TGTGATAGTTCAGTATTTGATCCATTGGGTATCAATTCAGGTAAATCATCCTGGGATAAT
TTAGTGAGCTTGCTCTCTCAGACATTTGAAAGCTCCTCAAACACTAGAAAAGAGAAAAAT
TCATCAGCTAGAGGGTTGGCAGCTGCAATTGAAGATACTAGCATTGATTTTGGAGACTTC
TTCAAAGGCCCGTTACCAGGAAAGTTTCTAAAGCTATTAGGATTTTTGGCTTTGTCACGA
CTCGGGATCTACATACCACTCGGTGGAGTAAATCGGGAGGCCTTTGTTGGCAATTTAGAT
GAGAATAGTATTTTAAGTACTTTGGATTCCTTTTCCGGTGGAGGTATAGGTCGCCTTGGA
ATCTGCTCCCTAGGTATTGTTCCCTTCATCAATGCACAAATTGTGTTTCAATTGCTTGCT
CAAATCTACCCCAAGTTGCAAGAACTTCAGAAAAGAGAAGGTGAAGCTGGAAGAAAGAAA
GTTCTCCAGTATACTCGCTATGCTTCTGTTGGATTTGCCGTAGTACAGGCAATTGGCCAA
GTATTGTTCCTTCGCCCTTATGTTAATGACTTCAGTACCCAGTGGGCAATTTCTTCCGTT
GTTCTTTTGACCCTCGGCTCAGTATTTACGACTTATATTGGGGAGCGAATCACTGATTTA
AAACTTGGAAACGGTACATCTCTTTTGATCTTTACAAATATCATCTCCTACTTGCCAGCG
TCCTTTGGTAGGACAGTCGCACAGGCCTATCAAGATGGTAATTATGTTGGGCTCGTTGGC
ATCCTAGTCTCATTCTTCCTGCTAGTCCTTAGCATTGTATATGTTCAGGAAGCAGAGAGG
AAAATTCCGCTAAATTATGCATCAAGGTATACTGGCAGAACAGGAGGAGGACTTCAAAAA
TCTGCATACTTACCGTTTAAAGTGAACAGTTCAGGAGTAATGCCGATTATTTTCTCAACA
TCATCACTAGCCCTTCCTGGCACTTTGGCACGTTTCACTGGTGTAGGTTTCCTGAGAAAG
GCTGCAGCAGGTTTAAACCCTGGAGGTTCTTTCTATCTGCCGACAAACATTTTGTTGATT
GCCTTCTTCAATTACTATTATACATTCCTGCAATTGGACCCTGATGATGTCAGTGATCAG
TTGAAACGACAAGGTGCCTCAATCCCACTTGTTCGACCGGGTAAAAGCACAGCGGCATTC
ATCAAAACGGTACTCAGCCGGATATCAGTTCTTGGTTCTGCATTTTTGGCACTTCTCGCT
GCTGGCCCTGCTGTGATTGAACAAGCCACACACCTCACTGCTTTCCGAGGCTTTGCAGGC
ACGTCAGTGCTTATTCTTGTTGGTTGTGCTACAGACACTGCAAGGAAAGTGCAGGCGGAG
ATCATATCCCAAAAATACAAGAATATAGAGTTTTATGACATTGATAATAAATATTGA