Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400070618
CDS Infomation

pacid=37433100 polypeptide=PGSC0003DMP400047747 locus=PGSC0003DMG400027451 ID=PGSC0003DMT400070618.v4.03 annot-version=v4.03
Sequence

ATGGAACTTGGAACTTTCAGTGCTTCAGGTGTCAACAAGAAGATGTTTTTATCGAACCCC
ATTACCCAAAAATCCAATGTTCTTCCAAATTCTTGGCTAAATCAATTGAATTTTTCGTTT
CCAGCAAGAAAAATCTGTTCTTGCAGAGGAATAGCTAAAGGGTCTACTATCAGCTCTTTG
AAAACTCAAGAAAAGGTCACAGGGATGTCTTCTAATCATTCTCAAGATCTAGAACTCTCA
AGTTTAACAGCTTTATGCCCATTGGATGGTCGCTATTGGGGTAAAGTCAAAGAATTGGCT
CCGTTTATGAGCGAGTATGGATTAATTCGGTTCCGCATTTTGGTTGAGATTAAGTGGTTG
ATAAAAATGTCTCAAATACCTCAAATTGTTGAAGTTCCAAGCTTCTCTGAAGAAGCTCAG
ACATTTTTGCATGACTTGATTGATGGATTTAGTATGAATGATGCCTTGGAAGTAAAGAAG
ATCGAGAGAGTCACAAACCATGATGTGAAAGCAGTGGAATACTTCTTGAAACAAAAATGC
CAATCACATCCAGAGATATCTAAGGTGCTCGAGTTTTTTCACTTTGCATGTACATCTGAG
GACATCAACAATCTTGCCCATGCATTGATGCTGAAAGGAGCTTTGAACACGGTCATCTTG
CCAGTCATGGATGAGTTGATTAAAGCAATTTGTGACATGGCCACAACACATTCTTCTGTT
CCTATGCTTTCTCGCACCCATGGGCAGCCAGCTTCACCGACAACCCTTGGAAAGGAAATG
GCAATTTTTGCTTATCGATTGAGTAGGGAAAGAAAGGAGATTTCTCAAATTGAGATGCTT
GGGAAATTTGCTGGTGCTGTAGGAAACTACAATGCACATGTAGCTGCGTATCCTGAAATA
AACTGGCCAGAAATTGCAGAGGAGTTTGTCTTGTCACTTGGATTAGAATTCAATCCATAT
GTTCCTCAGATTGAAACTCATGACTATATGGCCAAACTTTTTCACTCGATCGTCCAGTTT
AACAACATTTTGGTTGATTTTGATAGAGATGTTTGGGGATACATTTCTCTGGGTTACTTT
AAACAGACAACTAAAGCTGGTGAAATTGGGTCCTCGACGATGCCTCACAAAGTAAATCCA
ATTGACTTTGAAAATAGTGAAGGCAATCTTGGAGTAGCTAATGGAGATTTATCCCATTTG
AGCACTAAACTACCTATTTCACGCTGGCAGCGGGATTTGACAGATTCAACTGTTCTGAGA
AACATGGGAGTAGGACTAGGGCATTCTCTTCTTGCTTATAGAAGTGCATTACAGGGAATT
CAGAAGCTTCAGGTGAATGAAGCTGCTCTGATGGAAGATTTAGACAAAACATGGGAGGTT
CTTGCTGAACCAATACAAACGGTGATGCGAAGGTACGGTGTGCCAGAGCCTTATGAGAAA
CTGAAGGAGTTAACCCGAGGAAGAGCGGTGAACAAAGAAAGCATTAGAGAATTCATACAA
AAGTTGGACATACCAGCTGATGCAAAGACATCTCTCTTGAACTTAACGCCTCATACTTAC
GTTGGAGCAGCTGCAGAATTGGCTAAGAATGTAAACGAGGCCATATTTCTGTTGAGTAGT
CCATATCTTTTGAAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400047747
PEP Infomation

pacid=37433100 transcript=PGSC0003DMT400070618 locus=PGSC0003DMG400027451 ID=PGSC0003DMT400070618.v4.03 annot-version=v4.03
Sequence

MELGTFSASGVNKKMFLSNPITQKSNVLPNSWLNQLNFSFPARKICSCRGIAKGSTISSL
KTQEKVTGMSSNHSQDLELSSLTALCPLDGRYWGKVKELAPFMSEYGLIRFRILVEIKWL
IKMSQIPQIVEVPSFSEEAQTFLHDLIDGFSMNDALEVKKIERVTNHDVKAVEYFLKQKC
QSHPEISKVLEFFHFACTSEDINNLAHALMLKGALNTVILPVMDELIKAICDMATTHSSV
PMLSRTHGQPASPTTLGKEMAIFAYRLSRERKEISQIEMLGKFAGAVGNYNAHVAAYPEI
NWPEIAEEFVLSLGLEFNPYVPQIETHDYMAKLFHSIVQFNNILVDFDRDVWGYISLGYF
KQTTKAGEIGSSTMPHKVNPIDFENSEGNLGVANGDLSHLSTKLPISRWQRDLTDSTVLR
NMGVGLGHSLLAYRSALQGIQKLQVNEAALMEDLDKTWEVLAEPIQTVMRRYGVPEPYEK
LKELTRGRAVNKESIREFIQKLDIPADAKTSLLNLTPHTYVGAAAELAKNVNEAIFLLSS
PYLLK*

Transcript Sequence

Transcript ID

PGSC0003DMT400070618
Transcript Infomation

pacid=37433100 locus=PGSC0003DMG400027451 ID=PGSC0003DMT400070618.v4.03 annot-version=v4.03
Sequence

ATGGAACTTGGAACTTTCAGTGCTTCAGGTGTCAACAAGAAGATGTTTTTATCGAACCCC
ATTACCCAAAAATCCAATGTTCTTCCAAATTCTTGGCTAAATCAATTGAATTTTTCGTTT
CCAGCAAGAAAAATCTGTTCTTGCAGAGGAATAGCTAAAGGGTCTACTATCAGCTCTTTG
AAAACTCAAGAAAAGGTCACAGGGATGTCTTCTAATCATTCTCAAGATCTAGAACTCTCA
AGTTTAACAGCTTTATGCCCATTGGATGGTCGCTATTGGGGTAAAGTCAAAGAATTGGCT
CCGTTTATGAGCGAGTATGGATTAATTCGGTTCCGCATTTTGGTTGAGATTAAGTGGTTG
ATAAAAATGTCTCAAATACCTCAAATTGTTGAAGTTCCAAGCTTCTCTGAAGAAGCTCAG
ACATTTTTGCATGACTTGATTGATGGATTTAGTATGAATGATGCCTTGGAAGTAAAGAAG
ATCGAGAGAGTCACAAACCATGATGTGAAAGCAGTGGAATACTTCTTGAAACAAAAATGC
CAATCACATCCAGAGATATCTAAGGTGCTCGAGTTTTTTCACTTTGCATGTACATCTGAG
GACATCAACAATCTTGCCCATGCATTGATGCTGAAAGGAGCTTTGAACACGGTCATCTTG
CCAGTCATGGATGAGTTGATTAAAGCAATTTGTGACATGGCCACAACACATTCTTCTGTT
CCTATGCTTTCTCGCACCCATGGGCAGCCAGCTTCACCGACAACCCTTGGAAAGGAAATG
GCAATTTTTGCTTATCGATTGAGTAGGGAAAGAAAGGAGATTTCTCAAATTGAGATGCTT
GGGAAATTTGCTGGTGCTGTAGGAAACTACAATGCACATGTAGCTGCGTATCCTGAAATA
AACTGGCCAGAAATTGCAGAGGAGTTTGTCTTGTCACTTGGATTAGAATTCAATCCATAT
GTTCCTCAGATTGAAACTCATGACTATATGGCCAAACTTTTTCACTCGATCGTCCAGTTT
AACAACATTTTGGTTGATTTTGATAGAGATGTTTGGGGATACATTTCTCTGGGTTACTTT
AAACAGACAACTAAAGCTGGTGAAATTGGGTCCTCGACGATGCCTCACAAAGTAAATCCA
ATTGACTTTGAAAATAGTGAAGGCAATCTTGGAGTAGCTAATGGAGATTTATCCCATTTG
AGCACTAAACTACCTATTTCACGCTGGCAGCGGGATTTGACAGATTCAACTGTTCTGAGA
AACATGGGAGTAGGACTAGGGCATTCTCTTCTTGCTTATAGAAGTGCATTACAGGGAATT
CAGAAGCTTCAGGTGAATGAAGCTGCTCTGATGGAAGATTTAGACAAAACATGGGAGGTT
CTTGCTGAACCAATACAAACGGTGATGCGAAGGTACGGTGTGCCAGAGCCTTATGAGAAA
CTGAAGGAGTTAACCCGAGGAAGAGCGGTGAACAAAGAAAGCATTAGAGAATTCATACAA
AAGTTGGACATACCAGCTGATGCAAAGACATCTCTCTTGAACTTAACGCCTCATACTTAC
GTTGGAGCAGCTGCAGAATTGGCTAAGAATGTAAACGAGGCCATATTTCTGTTGAGTAGT
CCATATCTTTTGAAATGA