Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400070616
CDS Infomation

pacid=37434432 polypeptide=PGSC0003DMP400047745 locus=PGSC0003DMG400027450 ID=PGSC0003DMT400070616.v4.03 annot-version=v4.03
Sequence

ATGGAGCCGAAGAAGGAGAGGTTTGTAAGGTTCTACTCTGGTGAAAAGCAACAAGGTGGT
TTTTTGGGAGGAATAGCAGACAGTTCTAACGTAGAGAAAAAATTCTCACCTCCATTATTG
AACTCTGATGGCAAATATAAAGTCACTGATACTCTTAAGTTTGGGAGGCCTAAGAAGGTG
TATCCCGAGGACCATGAGTCCTGGAGGAAGCGAATACTTGATCCGGGGAGTGACCTTGTA
ATCCAGTGGAATAGAATTTTTATTATATCATGCTTGCTGGCACTGTTTGTTGATCCATTG
TATTTCTTTTTGCCCATCATACAAGGAACTAAAGAGTCGAGTTGTGTGAAAACAGATTTG
AATTTGCGAATTGTTGTCACCATTTTCCGAACTATAGCAGATTTTTTCTATCTATTACAT
GTGTTCATTAAGTTCCGGACTGCTTATGTTGCCCCAAATACAAGGGTATTTGGGAAGGGT
GAGCTTGTAATGGATCCTGGAGAAATTGCTAGAAGATATTTAAAATCTGACTTTTTCATC
GATCTGATTGCAACTCTTCCTCTACCTCAGATAGTCATCTGGTTCATTATACCAGCGACG
AGAAGCCAGCATGCTAATCATAACAATAATGCTCTTGCGCTGATTGTCCTAATCCAATAC
ATCCCCAGATTGTATCTTATATTTCCATTAAGTTCACAGATTATCAAAGCTACTGGAGTT
GTCACAAAAACTGCTTGGGCAGGGGCTGCATATAATCTACTTCTCTACATGTTGGCAAGT
CATGTTATAGGTGCAGCATGGTATTTACTGTCAGTTGATCGATATACTTCTTGCTGGAAA
TCAATATGCCGAAAGGAAGACAGCTCTACGCAGTGCGTGCTTCGCTACTTGGATTGTGAT
ACTTTTGACCTAAGTTCTCGTAAGAGTTGGGCAAATATCACCAAGGTATTTGAAAGTTGT
GATCCAGATGGGGATAGTACTTTTAAATATGGAATATTTGAAAGCGCAGTTAAAAAGGAT
GTTGTCTCCTCAAGTTTTATCGCAAAGTACTTCTATTGCTTGTGGTGGGGCTTACAACAG
CTGAGTTCTTATGGGCAGAATTTGTCAACGAGTACATTTATCGGGGAGACGTCCTTTGCT
ATACTTATTGCAATTTTGGGTCTGGTTTTGTTCGCACATCTTATTGGGAATATGCAGACA
TACTTGCAGTCTTTGACGTTGAGGGTCGAGGAATGGAGACTCAAGAGAAGAGATACCGAA
GAGTGGATGGAGCATCGTCAACTTCCAGAAGATTTGAGAAAGCGGGTTAGACGTTTTGAT
CAGTATAAATGGGTTGCTACTAGAGGAGTAGATGAAGAGACAATTTTACATGGCCTGCCT
ACTGATCTTCGTCGTGACATCCAACGCCATCTTTGCCTGGACCTTGTCCGAAGGGTTCCA
TTTTTCTCCCAAATGGATGATCAATTACTTGATGCAATATGTGAACGTCTAGTCTCGTCC
TTAAGCACAGAAGGCACTTATATTGTCCGTGAAGGAGATCCAGTCGCGGAAATGTTGTTT
ATCATCAGAGGTAGGCTCGAGAGTTCTACAACGAATGGTGGTCGGACTGGTTTCTTCAAT
TGCATTACATTGAGGCCTGGAGATTTTTGCGGAGAGGAGCTACTTGCTTGGGCTTTGCTT
CCGAAATCAACGATCAACTTGCCTTCTTCGACCAGAACAGTCAAGGCGCTTGTTGAAGTA
GAAGCATTCGCATTGAGAGCTGAAGATCTCAAGTTTGTTGCCAACCAATTTAGACGCCTT
CATAGCAAGAAGCTCCAGCATACATTCCGGTTCTACTCTCACCATTGGCGCACATGGGCA
GCCTGTTTCATTCAGGCTGCATGGAGACGACACAAGCGGAGAACAATGGCAAAAGATCTT
GCAGCACTGGAATCATTTTCTCTGGATGAGAGTACGGTCGATGAAACAGAGCAAAATGAG
GAACATGATCAAGGTAACGCTAGCTCAAATCCGTCCCCGAGAATATCACACCTCGGAGTC
ACAATATTGGCTTCAAGATTTGCTGCTAACACAAGAAGAGGAGCTCAAAAGCTTAAAGAT
GTAAGATTGCCTAAGTTACAGAAACCTGAAGAGCCTGACTTTTCAGCTGAGCCTGATGAC
TAG

Peptide Sequence

PEP ID

PGSC0003DMP400047745
PEP Infomation

pacid=37434432 transcript=PGSC0003DMT400070616 locus=PGSC0003DMG400027450 ID=PGSC0003DMT400070616.v4.03 annot-version=v4.03
Sequence

MEPKKERFVRFYSGEKQQGGFLGGIADSSNVEKKFSPPLLNSDGKYKVTDTLKFGRPKKV
YPEDHESWRKRILDPGSDLVIQWNRIFIISCLLALFVDPLYFFLPIIQGTKESSCVKTDL
NLRIVVTIFRTIADFFYLLHVFIKFRTAYVAPNTRVFGKGELVMDPGEIARRYLKSDFFI
DLIATLPLPQIVIWFIIPATRSQHANHNNNALALIVLIQYIPRLYLIFPLSSQIIKATGV
VTKTAWAGAAYNLLLYMLASHVIGAAWYLLSVDRYTSCWKSICRKEDSSTQCVLRYLDCD
TFDLSSRKSWANITKVFESCDPDGDSTFKYGIFESAVKKDVVSSSFIAKYFYCLWWGLQQ
LSSYGQNLSTSTFIGETSFAILIAILGLVLFAHLIGNMQTYLQSLTLRVEEWRLKRRDTE
EWMEHRQLPEDLRKRVRRFDQYKWVATRGVDEETILHGLPTDLRRDIQRHLCLDLVRRVP
FFSQMDDQLLDAICERLVSSLSTEGTYIVREGDPVAEMLFIIRGRLESSTTNGGRTGFFN
CITLRPGDFCGEELLAWALLPKSTINLPSSTRTVKALVEVEAFALRAEDLKFVANQFRRL
HSKKLQHTFRFYSHHWRTWAACFIQAAWRRHKRRTMAKDLAALESFSLDESTVDETEQNE
EHDQGNASSNPSPRISHLGVTILASRFAANTRRGAQKLKDVRLPKLQKPEEPDFSAEPDD
*

Transcript Sequence

Transcript ID

PGSC0003DMT400070616
Transcript Infomation

pacid=37434432 locus=PGSC0003DMG400027450 ID=PGSC0003DMT400070616.v4.03 annot-version=v4.03
Sequence

ATGGAGCCGAAGAAGGAGAGGTTTGTAAGGTTCTACTCTGGTGAAAAGCAACAAGGTGGT
TTTTTGGGAGGAATAGCAGACAGTTCTAACGTAGAGAAAAAATTCTCACCTCCATTATTG
AACTCTGATGGCAAATATAAAGTCACTGATACTCTTAAGTTTGGGAGGCCTAAGAAGGTG
TATCCCGAGGACCATGAGTCCTGGAGGAAGCGAATACTTGATCCGGGGAGTGACCTTGTA
ATCCAGTGGAATAGAATTTTTATTATATCATGCTTGCTGGCACTGTTTGTTGATCCATTG
TATTTCTTTTTGCCCATCATACAAGGAACTAAAGAGTCGAGTTGTGTGAAAACAGATTTG
AATTTGCGAATTGTTGTCACCATTTTCCGAACTATAGCAGATTTTTTCTATCTATTACAT
GTGTTCATTAAGTTCCGGACTGCTTATGTTGCCCCAAATACAAGGGTATTTGGGAAGGGT
GAGCTTGTAATGGATCCTGGAGAAATTGCTAGAAGATATTTAAAATCTGACTTTTTCATC
GATCTGATTGCAACTCTTCCTCTACCTCAGATAGTCATCTGGTTCATTATACCAGCGACG
AGAAGCCAGCATGCTAATCATAACAATAATGCTCTTGCGCTGATTGTCCTAATCCAATAC
ATCCCCAGATTGTATCTTATATTTCCATTAAGTTCACAGATTATCAAAGCTACTGGAGTT
GTCACAAAAACTGCTTGGGCAGGGGCTGCATATAATCTACTTCTCTACATGTTGGCAAGT
CATGTTATAGGTGCAGCATGGTATTTACTGTCAGTTGATCGATATACTTCTTGCTGGAAA
TCAATATGCCGAAAGGAAGACAGCTCTACGCAGTGCGTGCTTCGCTACTTGGATTGTGAT
ACTTTTGACCTAAGTTCTCGTAAGAGTTGGGCAAATATCACCAAGGTATTTGAAAGTTGT
GATCCAGATGGGGATAGTACTTTTAAATATGGAATATTTGAAAGCGCAGTTAAAAAGGAT
GTTGTCTCCTCAAGTTTTATCGCAAAGTACTTCTATTGCTTGTGGTGGGGCTTACAACAG
CTGAGTTCTTATGGGCAGAATTTGTCAACGAGTACATTTATCGGGGAGACGTCCTTTGCT
ATACTTATTGCAATTTTGGGTCTGGTTTTGTTCGCACATCTTATTGGGAATATGCAGACA
TACTTGCAGTCTTTGACGTTGAGGGTCGAGGAATGGAGACTCAAGAGAAGAGATACCGAA
GAGTGGATGGAGCATCGTCAACTTCCAGAAGATTTGAGAAAGCGGGTTAGACGTTTTGAT
CAGTATAAATGGGTTGCTACTAGAGGAGTAGATGAAGAGACAATTTTACATGGCCTGCCT
ACTGATCTTCGTCGTGACATCCAACGCCATCTTTGCCTGGACCTTGTCCGAAGGGTTCCA
TTTTTCTCCCAAATGGATGATCAATTACTTGATGCAATATGTGAACGTCTAGTCTCGTCC
TTAAGCACAGAAGGCACTTATATTGTCCGTGAAGGAGATCCAGTCGCGGAAATGTTGTTT
ATCATCAGAGGTAGGCTCGAGAGTTCTACAACGAATGGTGGTCGGACTGGTTTCTTCAAT
TGCATTACATTGAGGCCTGGAGATTTTTGCGGAGAGGAGCTACTTGCTTGGGCTTTGCTT
CCGAAATCAACGATCAACTTGCCTTCTTCGACCAGAACAGTCAAGGCGCTTGTTGAAGTA
GAAGCATTCGCATTGAGAGCTGAAGATCTCAAGTTTGTTGCCAACCAATTTAGACGCCTT
CATAGCAAGAAGCTCCAGCATACATTCCGGTTCTACTCTCACCATTGGCGCACATGGGCA
GCCTGTTTCATTCAGGCTGCATGGAGACGACACAAGCGGAGAACAATGGCAAAAGATCTT
GCAGCACTGGAATCATTTTCTCTGGATGAGAGTACGGTCGATGAAACAGAGCAAAATGAG
GAACATGATCAAGGTAACGCTAGCTCAAATCCGTCCCCGAGAATATCACACCTCGGAGTC
ACAATATTGGCTTCAAGATTTGCTGCTAACACAAGAAGAGGAGCTCAAAAGCTTAAAGAT
GTAAGATTGCCTAAGTTACAGAAACCTGAAGAGCCTGACTTTTCAGCTGAGCCTGATGAC
TAG