Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400070584
CDS Infomation

pacid=37444520 polypeptide=PGSC0003DMP400047720 locus=PGSC0003DMG400027434 ID=PGSC0003DMT400070584.v4.03 annot-version=v4.03
Sequence

ATGTTAGAGAACATCCATGCACATTGGAAGCGAAAAAGGGTGTGCAAGATAAAATGCAAG
GGTGTGTGTACTGTGGACATGGACAATGTCTGTGAAAAGTTAGAGGAGAAGACAGGTGGG
AAAATTATCTATCATAAAGGTGGTTTGATATACCTTTTCCGTGGTCGAAACTACAACTAC
AAGACTCGGCCACGCTTTCCTCTCATGTTATGGCGGCCTGTAACTCCTGTCTACCCAAGG
TTGGTTCAACGAGTTCCAGAGGGTCTGACTTTAGAGGAAGCAACTTTAATGCGCAAAAAA
GGACGCAATCTGATACCTATCTGCAAGCTTGCAAAAAATGGGGTGTATTGTGACCTTGTA
AAGAATGTCAGAGAAGCATTTGAAGCTTGTGAATTGGTGTCTATAAATTGTCAAGGATTG
AACCCAAGCGACTATAGGAAGATAGGTGCCAAGCTTAAGGATCTTGTCCCATGTGTGTTA
ATCTCTTTTGAGCAAGAGCACATACTCATGTGGAGAGGACGGGATTGGGTATCCTCTCTA
CCTGAAGACAGAGACAATGATTCTGATAAAGCTGCTAACACTAACCGATCCTTGGAAGTC
CAAGTGGTTGCATCTACTTCTGGAAGTCCACGCTTACCAATTACAGAAATGAATACTTGC
AATCTCAGTGCTAACACTTTTCCTCTGGGTGAGGAAGAATCAGAGTATGTTAGAAGGGAC
GGAACGAAGGAAGATAGGTCGGAGGATCACTATCTGGAATCTTCCAATAAGGCTCCTTTA
GATGTTTGTTCTGTTACAACGACAGGGATAAGTGAAAGCGAAATCCCTCTGGTGTATGCA
GGAGATACAGGTGACAATTCTAGAATTCTGAGTGACTGCCGTGAATGCAAAACAAGGTTG
GATGATTCAGTGGTGGATACAGAAAATGAGTTGGAGAGCGCTTCAGATGATGTAGAAAAC
AAGTTTGATTCCTCATCTTTGGTTCCCTTGACTGGTTACAAGGTGCATTCTCTAACGGTA
GATACAAACCAAAACTGTCAGCTGGTAAGCTCAATCACGCCATGTACGGAAGGAATTTTA
CTACTTTGGAAGCAGGCTATTGAAAGTGGGAGTGCAGTTCTATTAGATGATTCTAGTATC
GATGCTGACATTGTCTATCAAAGGGCTGTTGCTCTCTCTACATCTGCCCCAGCTGGACCA
GTTTTTCAGCATCAACCTAAGAAAGTGTCAGTTCAAAGACGCGGGGAAGAGGAAATTGGT
GATTTGGAGGTAGGATGCACCAAATTAGATACTCCAGCTTCTTCGAGAAAAGAAACTGCT
GTTTCAGGTAGAAAGGTCAATTCGACAACGAGTACAAGAAAGGAGAAGTTAAAGGGTATT
CGAGAAGATTATCTGAATGTAGTACCAAAAGGAAGCTTAGGAGTAGACGAACTTGCCAAA
TTACTAGCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400047720
PEP Infomation

pacid=37444520 transcript=PGSC0003DMT400070584 locus=PGSC0003DMG400027434 ID=PGSC0003DMT400070584.v4.03 annot-version=v4.03
Sequence

MLENIHAHWKRKRVCKIKCKGVCTVDMDNVCEKLEEKTGGKIIYHKGGLIYLFRGRNYNY
KTRPRFPLMLWRPVTPVYPRLVQRVPEGLTLEEATLMRKKGRNLIPICKLAKNGVYCDLV
KNVREAFEACELVSINCQGLNPSDYRKIGAKLKDLVPCVLISFEQEHILMWRGRDWVSSL
PEDRDNDSDKAANTNRSLEVQVVASTSGSPRLPITEMNTCNLSANTFPLGEEESEYVRRD
GTKEDRSEDHYLESSNKAPLDVCSVTTTGISESEIPLVYAGDTGDNSRILSDCRECKTRL
DDSVVDTENELESASDDVENKFDSSSLVPLTGYKVHSLTVDTNQNCQLVSSITPCTEGIL
LLWKQAIESGSAVLLDDSSIDADIVYQRAVALSTSAPAGPVFQHQPKKVSVQRRGEEEIG
DLEVGCTKLDTPASSRKETAVSGRKVNSTTSTRKEKLKGIREDYLNVVPKGSLGVDELAK
LLA*

Transcript Sequence

Transcript ID

PGSC0003DMT400070584
Transcript Infomation

pacid=37444520 locus=PGSC0003DMG400027434 ID=PGSC0003DMT400070584.v4.03 annot-version=v4.03
Sequence

ATGTTAGAGAACATCCATGCACATTGGAAGCGAAAAAGGGTGTGCAAGATAAAATGCAAG
GGTGTGTGTACTGTGGACATGGACAATGTCTGTGAAAAGTTAGAGGAGAAGACAGGTGGG
AAAATTATCTATCATAAAGGTGGTTTGATATACCTTTTCCGTGGTCGAAACTACAACTAC
AAGACTCGGCCACGCTTTCCTCTCATGTTATGGCGGCCTGTAACTCCTGTCTACCCAAGG
TTGGTTCAACGAGTTCCAGAGGGTCTGACTTTAGAGGAAGCAACTTTAATGCGCAAAAAA
GGACGCAATCTGATACCTATCTGCAAGCTTGCAAAAAATGGGGTGTATTGTGACCTTGTA
AAGAATGTCAGAGAAGCATTTGAAGCTTGTGAATTGGTGTCTATAAATTGTCAAGGATTG
AACCCAAGCGACTATAGGAAGATAGGTGCCAAGCTTAAGGATCTTGTCCCATGTGTGTTA
ATCTCTTTTGAGCAAGAGCACATACTCATGTGGAGAGGACGGGATTGGGTATCCTCTCTA
CCTGAAGACAGAGACAATGATTCTGATAAAGCTGCTAACACTAACCGATCCTTGGAAGTC
CAAGTGGTTGCATCTACTTCTGGAAGTCCACGCTTACCAATTACAGAAATGAATACTTGC
AATCTCAGTGCTAACACTTTTCCTCTGGGTGAGGAAGAATCAGAGTATGTTAGAAGGGAC
GGAACGAAGGAAGATAGGTCGGAGGATCACTATCTGGAATCTTCCAATAAGGCTCCTTTA
GATGTTTGTTCTGTTACAACGACAGGGATAAGTGAAAGCGAAATCCCTCTGGTGTATGCA
GGAGATACAGGTGACAATTCTAGAATTCTGAGTGACTGCCGTGAATGCAAAACAAGGTTG
GATGATTCAGTGGTGGATACAGAAAATGAGTTGGAGAGCGCTTCAGATGATGTAGAAAAC
AAGTTTGATTCCTCATCTTTGGTTCCCTTGACTGGTTACAAGGTGCATTCTCTAACGGTA
GATACAAACCAAAACTGTCAGCTGGTAAGCTCAATCACGCCATGTACGGAAGGAATTTTA
CTACTTTGGAAGCAGGCTATTGAAAGTGGGAGTGCAGTTCTATTAGATGATTCTAGTATC
GATGCTGACATTGTCTATCAAAGGGCTGTTGCTCTCTCTACATCTGCCCCAGCTGGACCA
GTTTTTCAGCATCAACCTAAGAAAGTGTCAGTTCAAAGACGCGGGGAAGAGGAAATTGGT
GATTTGGAGGTAGGATGCACCAAATTAGATACTCCAGCTTCTTCGAGAAAAGAAACTGCT
GTTTCAGGTAGAAAGGTCAATTCGACAACGAGTACAAGAAAGGAGAAGTTAAAGGGTATT
CGAGAAGATTATCTGAATGTAGTACCAAAAGGAAGCTTAGGAGTAGACGAACTTGCCAAA
TTACTAGCATAG