Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400070582
CDS Infomation

pacid=37443429 polypeptide=PGSC0003DMP400047718 locus=PGSC0003DMG400027433 ID=PGSC0003DMT400070582.v4.03 annot-version=v4.03
Sequence

ATGGAGGATCCCTTTTTACATCTTGCAAGCTTGAGCTCTTATATAGCCCAGCAATTTGTT
CAATTTATTGAGGATCTTATCTGCAGAGATATCCTTGGGTGGTCAGAATATTTAGTTGAC
TTTGGTGGTCTGCTTGTAAACTTTACCAGTGACGGGGGTTGTAGAACTGTTCCTGAGGCT
TGTTCATTTCCTTCAAGAGTATCTGACACAGGAACAAGCTTTAGAATTCACGCAAGACGA
TCCTCCTATGTCAATGATAACTTGCCTGTAAATTCATTATTAGAAATTGTAAGAAGTAAT
CAAAGTTATGGAGGTTTCAGACTCATTTTTGAAGGGTTGATGCTTCCAGTATATGGTCTG
AGATTCACTTGGAAACTTTCGTTGGCCTCTTGGAGGTGTTTCATATCTCATATCAGATGT
GCTCTAGTTCAAGTTCAGAGTGTTATATCCCGTGTACGTACAACCTTGCGTGGGTCTTCT
GATGACATTGGGTGGTTGCAACAAGCTACTGAAATGGCTCCTGTTGTTGATGGTTCAGCT
AGATTTAGAGAACTACTACAAGATATTAGGAATGGACAGCACACACTGCCTGATTCTTTT
GTTTATCTACTGATTCCAGGGTTTTTCAGCAATCACGGTCCTTTATATTTTGTGAGCACT
AAGAAGTTTTTTTCGAAGATGGGGTTAACTTGCCATATTGCTAAGATACATAGTGAGGCA
TCCGTGGAACAAAATGCGTGGGAACTGAAGCAATGCATCGAGGAGTTACATTGGGGATCA
GGAAAACATGTCATGCTGCTTGGTCACAGTAAGGGTGGGGTTGATGCTGCCGCCGCTTTG
TCAAAATATTGGCATGATTTAAAGGATAAAGTTGCAGGACTGGCATTTGTGCAGAGCCCT
TATGGTGGAATACCTGTTGCATCAGATATTCTTCGTGACGGACAGATTGCTGACAAGGAA
ACACGAAGGATCATGGAGTTTTTACTATGCAAGTTAATTAAGGGTGATATACGGGCATTA
GAGGATCTAACATACGAGAAGCGAAAGGAGTTCTTAAAAAACCACAAGCTTCCTGATGAT
ATTCCACTCATCTCCTTCCATTCTGAAGCAAGTATAGCACTGAATGTAATAGCAACAATG
TCCCATATAGCACATGCAGAACTTCCGTGGCTACCTTTGCCCGGATTTGGTGACAATGAG
TCGGAGAATGTGATCCAAGCAGGGTGCAAGGTGCCTGTCATAGTTCCTGTTTCTGCTGCA
CTGGCTCTTTGTGCTCTCCACCTGCAACTAAGGTATGGAGAGAAGAGTGATGGTCTAGTG
ACCTGTCGTGATGCTGAAGTTCCCGGGTCAGTGGTTGTAAAACCAGACATAAAGCTTGAT
CATGCTTGGATGGTTTATTCGTCATGGAGAAAGGACCCAAATGAAGCGGACGCTAGTGAA
ATGTGTGAGGCTCTCTTAACTATGCTTGTGGAACTCGGTATGAAACGAAAGGAAGATTGT
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400047718
PEP Infomation

pacid=37443429 transcript=PGSC0003DMT400070582 locus=PGSC0003DMG400027433 ID=PGSC0003DMT400070582.v4.03 annot-version=v4.03
Sequence

MEDPFLHLASLSSYIAQQFVQFIEDLICRDILGWSEYLVDFGGLLVNFTSDGGCRTVPEA
CSFPSRVSDTGTSFRIHARRSSYVNDNLPVNSLLEIVRSNQSYGGFRLIFEGLMLPVYGL
RFTWKLSLASWRCFISHIRCALVQVQSVISRVRTTLRGSSDDIGWLQQATEMAPVVDGSA
RFRELLQDIRNGQHTLPDSFVYLLIPGFFSNHGPLYFVSTKKFFSKMGLTCHIAKIHSEA
SVEQNAWELKQCIEELHWGSGKHVMLLGHSKGGVDAAAALSKYWHDLKDKVAGLAFVQSP
YGGIPVASDILRDGQIADKETRRIMEFLLCKLIKGDIRALEDLTYEKRKEFLKNHKLPDD
IPLISFHSEASIALNVIATMSHIAHAELPWLPLPGFGDNESENVIQAGCKVPVIVPVSAA
LALCALHLQLRYGEKSDGLVTCRDAEVPGSVVVKPDIKLDHAWMVYSSWRKDPNEADASE
MCEALLTMLVELGMKRKEDC*

Transcript Sequence

Transcript ID

PGSC0003DMT400070582
Transcript Infomation

pacid=37443429 locus=PGSC0003DMG400027433 ID=PGSC0003DMT400070582.v4.03 annot-version=v4.03
Sequence

ATGGAGGATCCCTTTTTACATCTTGCAAGCTTGAGCTCTTATATAGCCCAGCAATTTGTT
CAATTTATTGAGGATCTTATCTGCAGAGATATCCTTGGGTGGTCAGAATATTTAGTTGAC
TTTGGTGGTCTGCTTGTAAACTTTACCAGTGACGGGGGTTGTAGAACTGTTCCTGAGGCT
TGTTCATTTCCTTCAAGAGTATCTGACACAGGAACAAGCTTTAGAATTCACGCAAGACGA
TCCTCCTATGTCAATGATAACTTGCCTGTAAATTCATTATTAGAAATTGTAAGAAGTAAT
CAAAGTTATGGAGGTTTCAGACTCATTTTTGAAGGGTTGATGCTTCCAGTATATGGTCTG
AGATTCACTTGGAAACTTTCGTTGGCCTCTTGGAGGTGTTTCATATCTCATATCAGATGT
GCTCTAGTTCAAGTTCAGAGTGTTATATCCCGTGTACGTACAACCTTGCGTGGGTCTTCT
GATGACATTGGGTGGTTGCAACAAGCTACTGAAATGGCTCCTGTTGTTGATGGTTCAGCT
AGATTTAGAGAACTACTACAAGATATTAGGAATGGACAGCACACACTGCCTGATTCTTTT
GTTTATCTACTGATTCCAGGGTTTTTCAGCAATCACGGTCCTTTATATTTTGTGAGCACT
AAGAAGTTTTTTTCGAAGATGGGGTTAACTTGCCATATTGCTAAGATACATAGTGAGGCA
TCCGTGGAACAAAATGCGTGGGAACTGAAGCAATGCATCGAGGAGTTACATTGGGGATCA
GGAAAACATGTCATGCTGCTTGGTCACAGTAAGGGTGGGGTTGATGCTGCCGCCGCTTTG
TCAAAATATTGGCATGATTTAAAGGATAAAGTTGCAGGACTGGCATTTGTGCAGAGCCCT
TATGGTGGAATACCTGTTGCATCAGATATTCTTCGTGACGGACAGATTGCTGACAAGGAA
ACACGAAGGATCATGGAGTTTTTACTATGCAAGTTAATTAAGGGTGATATACGGGCATTA
GAGGATCTAACATACGAGAAGCGAAAGGAGTTCTTAAAAAACCACAAGCTTCCTGATGAT
ATTCCACTCATCTCCTTCCATTCTGAAGCAAGTATAGCACTGAATGTAATAGCAACAATG
TCCCATATAGCACATGCAGAACTTCCGTGGCTACCTTTGCCCGGATTTGGTGACAATGAG
TCGGAGAATGTGATCCAAGCAGGGTGCAAGGTGCCTGTCATAGTTCCTGTTTCTGCTGCA
CTGGCTCTTTGTGCTCTCCACCTGCAACTAAGGTATGGAGAGAAGAGTGATGGTCTAGTG
ACCTGTCGTGATGCTGAAGTTCCCGGGTCAGTGGTTGTAAAACCAGACATAAAGCTTGAT
CATGCTTGGATGGTTTATTCGTCATGGAGAAAGGACCCAAATGAAGCGGACGCTAGTGAA
ATGTGTGAGGCTCTCTTAACTATGCTTGTGGAACTCGGTATGAAACGAAAGGAAGATTGT
TGA