Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400070569
CDS Infomation

pacid=37443136 polypeptide=PGSC0003DMP400047709 locus=PGSC0003DMG400027429 ID=PGSC0003DMT400070569.v4.03 annot-version=v4.03
Sequence

ATGGTGGAAAATTCAAGTTACAGATCTGAGGAGGATAACCTTGGTGGAGGGGGAAGAGAT
TTTCTTGGAAAATCGGTATCAGAAATGGATGGTGTTTCGAAAATAACTCCTCCTAGCTGC
CAAGAGTTGACTCTTAGCTACCTTTGTGAAAACTCGAAACTTGGGTTTGTGAGCTATAAA
GGGAAAGAAGTGATGGAGGAAAGTAACAAGAGATGGGTTGAAAGGGATTTTCTTCAAATG
AATGAGAGTAGTACTAGTAAAGGGGTTAATGGTAATGGGAATTCATCTAGACATGAGGAG
GCAGAAAAAATTGAAACCCCCCTTAACCTTTCTTTGGCTTTGCCTGATGTTTCACTGTCT
TTGGCTGGTTCAAATAGATTCGATCTTCAACCATCATCGCATAATAATACTCATTCCGCG
TCATTGTCATGCTCTTACTCCCACCCTTTTTCCCACAATATGAGTTGCTCTCTTACTCGG
AATTCGACTGATTTTTCTGTTGATCACATCTGGAATTGTGGAGAAGGAACTAATGGTTCA
GTTCATAGCCGATTTAGGCCAATTCCTACCAATCAAGTTTTACCTAAGGAAACTTCAGAT
AACATTTCTTTTTTTCCATCTGAGTTGCCTGCAAGACCAACAATTGATGATTTACAGAGT
CCAGTGAAGATTTCTAGGCCTGAAAGAATCCTTAGAGAAATTGTTTCTGAATCTATTCCT
CTTATGGCTCAGATTGTGCAAGAGCTTCCTCATGAAACACTTGAATCAACAAAGGAATAC
TTGAGGAACCTAATTGAGAGAAAAGATGATCATTTAGTTGTCCTTCAGAACAGATTAAAT
AGGAGATGTGATCTTACCAATGAGACTCTCACAAAGTGTCACAAGACTCAACTGGAGTTT
TTTGTTGCAATGAAAATGGGTGTTGGAAGCTTTTTATCTAGCAAAAAAGTCATACCAACA
ACTGAATTGGCGGAAATTTTCTTACTTGAAAGGTGTCGAAACATAAATTGTATGAGGGGT
TTACCTGTTGAGGACTGTGAATGCAAGATATGTTCAACAAAGAAGGGATTCTGCAGTGAA
TGCATGTGTCCAATATGTTTGAATTTTGATTGTGCGAATAATACTTGCAGTTGGGTAGGG
TGTGATGCTTGTTCACACTGGTGTCATGCTGTTTGTGGTATTCAGAAGAATCTCATAAAG
CCAGGTCCAACCGAAATGCAATTTTACTGTATTGGATGCGGTCATGCATCTGAAATGTTT
GGATTTGTTAAAGATGTCTTCACCTCTTGTGCAAAAGACTGGGGTAAAGAAACGTTGGTG
AAAGAGCTTGATTGTGTTCAGAAAATTTTCCAACGGAGTCAAGATTTTAAAGGCAAGGAG
TTGCATCTTAAGGCTGATGAATTGCGTATCAAGCTACAAAAAAACATGATTTCTCCTCCA
GATGTCTGCAATTTCATCATTCACTTTTTTAATTACACAGAAGGCCTGTCAGAGTTTCCT
GATAAAGACTTTAGTGGTAGAAAAAAAGATGTTGTTTCTCTTCCTGCATCTACTACCGTT
GCTCCGAAATCTTCCCCGTACAACATAAGCTCTTCAAGTGGAAGAAAAGATGTGATATTT
GATGAGCATCATCAGCAGAAAGATGTTAAGCCTTCCTTCATGCCTGAAAAAATAGTTGAA
GATGAATGGTCTGTGAAGCGACTAAAGAAGGATGAGCTTGCTAGCTTGGAAAGCATTGTG
CGGATCAAAGAAGCAGAAGCAAGGATGTTTCAGAATCGAGCAGATGATGCTCGCCGAGAG
GCAGAGAGTTTTAGACGGGTGGCTAGAATGAAAAGTGAGAAATTGGATGATGAGTATTCA
GAAAAACTTGCTAGACTGTGTTTGCAGGAGACTGAGGAAAGGAGGAGGAAAAAGTTGGAA
GAGCTTAAAGTATTGGAGAATTCACATTGTGATTACTACAAGATGAAAATGAGAATGGAA
TCTGATATTACAGGCTTGCTTAAAAGAATGGAAGCAACTAAGCAGTTGTGGGTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400047709
PEP Infomation

pacid=37443136 transcript=PGSC0003DMT400070569 locus=PGSC0003DMG400027429 ID=PGSC0003DMT400070569.v4.03 annot-version=v4.03
Sequence

MVENSSYRSEEDNLGGGGRDFLGKSVSEMDGVSKITPPSCQELTLSYLCENSKLGFVSYK
GKEVMEESNKRWVERDFLQMNESSTSKGVNGNGNSSRHEEAEKIETPLNLSLALPDVSLS
LAGSNRFDLQPSSHNNTHSASLSCSYSHPFSHNMSCSLTRNSTDFSVDHIWNCGEGTNGS
VHSRFRPIPTNQVLPKETSDNISFFPSELPARPTIDDLQSPVKISRPERILREIVSESIP
LMAQIVQELPHETLESTKEYLRNLIERKDDHLVVLQNRLNRRCDLTNETLTKCHKTQLEF
FVAMKMGVGSFLSSKKVIPTTELAEIFLLERCRNINCMRGLPVEDCECKICSTKKGFCSE
CMCPICLNFDCANNTCSWVGCDACSHWCHAVCGIQKNLIKPGPTEMQFYCIGCGHASEMF
GFVKDVFTSCAKDWGKETLVKELDCVQKIFQRSQDFKGKELHLKADELRIKLQKNMISPP
DVCNFIIHFFNYTEGLSEFPDKDFSGRKKDVVSLPASTTVAPKSSPYNISSSSGRKDVIF
DEHHQQKDVKPSFMPEKIVEDEWSVKRLKKDELASLESIVRIKEAEARMFQNRADDARRE
AESFRRVARMKSEKLDDEYSEKLARLCLQETEERRRKKLEELKVLENSHCDYYKMKMRME
SDITGLLKRMEATKQLWV*

Transcript Sequence

Transcript ID

PGSC0003DMT400070569
Transcript Infomation

pacid=37443136 locus=PGSC0003DMG400027429 ID=PGSC0003DMT400070569.v4.03 annot-version=v4.03
Sequence

ATGGTGGAAAATTCAAGTTACAGATCTGAGGAGGATAACCTTGGTGGAGGGGGAAGAGAT
TTTCTTGGAAAATCGGTATCAGAAATGGATGGTGTTTCGAAAATAACTCCTCCTAGCTGC
CAAGAGTTGACTCTTAGCTACCTTTGTGAAAACTCGAAACTTGGGTTTGTGAGCTATAAA
GGGAAAGAAGTGATGGAGGAAAGTAACAAGAGATGGGTTGAAAGGGATTTTCTTCAAATG
AATGAGAGTAGTACTAGTAAAGGGGTTAATGGTAATGGGAATTCATCTAGACATGAGGAG
GCAGAAAAAATTGAAACCCCCCTTAACCTTTCTTTGGCTTTGCCTGATGTTTCACTGTCT
TTGGCTGGTTCAAATAGATTCGATCTTCAACCATCATCGCATAATAATACTCATTCCGCG
TCATTGTCATGCTCTTACTCCCACCCTTTTTCCCACAATATGAGTTGCTCTCTTACTCGG
AATTCGACTGATTTTTCTGTTGATCACATCTGGAATTGTGGAGAAGGAACTAATGGTTCA
GTTCATAGCCGATTTAGGCCAATTCCTACCAATCAAGTTTTACCTAAGGAAACTTCAGAT
AACATTTCTTTTTTTCCATCTGAGTTGCCTGCAAGACCAACAATTGATGATTTACAGAGT
CCAGTGAAGATTTCTAGGCCTGAAAGAATCCTTAGAGAAATTGTTTCTGAATCTATTCCT
CTTATGGCTCAGATTGTGCAAGAGCTTCCTCATGAAACACTTGAATCAACAAAGGAATAC
TTGAGGAACCTAATTGAGAGAAAAGATGATCATTTAGTTGTCCTTCAGAACAGATTAAAT
AGGAGATGTGATCTTACCAATGAGACTCTCACAAAGTGTCACAAGACTCAACTGGAGTTT
TTTGTTGCAATGAAAATGGGTGTTGGAAGCTTTTTATCTAGCAAAAAAGTCATACCAACA
ACTGAATTGGCGGAAATTTTCTTACTTGAAAGGTGTCGAAACATAAATTGTATGAGGGGT
TTACCTGTTGAGGACTGTGAATGCAAGATATGTTCAACAAAGAAGGGATTCTGCAGTGAA
TGCATGTGTCCAATATGTTTGAATTTTGATTGTGCGAATAATACTTGCAGTTGGGTAGGG
TGTGATGCTTGTTCACACTGGTGTCATGCTGTTTGTGGTATTCAGAAGAATCTCATAAAG
CCAGGTCCAACCGAAATGCAATTTTACTGTATTGGATGCGGTCATGCATCTGAAATGTTT
GGATTTGTTAAAGATGTCTTCACCTCTTGTGCAAAAGACTGGGGTAAAGAAACGTTGGTG
AAAGAGCTTGATTGTGTTCAGAAAATTTTCCAACGGAGTCAAGATTTTAAAGGCAAGGAG
TTGCATCTTAAGGCTGATGAATTGCGTATCAAGCTACAAAAAAACATGATTTCTCCTCCA
GATGTCTGCAATTTCATCATTCACTTTTTTAATTACACAGAAGGCCTGTCAGAGTTTCCT
GATAAAGACTTTAGTGGTAGAAAAAAAGATGTTGTTTCTCTTCCTGCATCTACTACCGTT
GCTCCGAAATCTTCCCCGTACAACATAAGCTCTTCAAGTGGAAGAAAAGATGTGATATTT
GATGAGCATCATCAGCAGAAAGATGTTAAGCCTTCCTTCATGCCTGAAAAAATAGTTGAA
GATGAATGGTCTGTGAAGCGACTAAAGAAGGATGAGCTTGCTAGCTTGGAAAGCATTGTG
CGGATCAAAGAAGCAGAAGCAAGGATGTTTCAGAATCGAGCAGATGATGCTCGCCGAGAG
GCAGAGAGTTTTAGACGGGTGGCTAGAATGAAAAGTGAGAAATTGGATGATGAGTATTCA
GAAAAACTTGCTAGACTGTGTTTGCAGGAGACTGAGGAAAGGAGGAGGAAAAAGTTGGAA
GAGCTTAAAGTATTGGAGAATTCACATTGTGATTACTACAAGATGAAAATGAGAATGGAA
TCTGATATTACAGGCTTGCTTAAAAGAATGGAAGCAACTAAGCAGTTGTGGGTTTAA