Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400070540
CDS Infomation

pacid=37466043 polypeptide=PGSC0003DMP400047689 locus=PGSC0003DMG400027415 ID=PGSC0003DMT400070540.v4.03 annot-version=v4.03
Sequence

ATGTCTCGAGCAGCCAGGTCCAAGTCAAAGGATAAAAAGGTGAGCAAAGAACCACCCAAA
ATTGCTTCAAAGCCTTCTAGTGGTAGTGGATACAATCCTATTTTTGGGACATTCCAAACA
TATGACCCAGCTCCCGTGACTGCAAATGTTGCTCTCCACATCAATGGTCGTTTCAGAAGC
ATTGATGAGAGAGATGACCTTAGTGGGCACTCTCATGGAGCTGGTGGAGAGTATGAAATT
GTTTCCAATAATGGTAGCTGGTCTGGTGAGGAGGACCACAAAGAGAAAACTTCTAATCTT
CCTCTCCGACAAGAAACCTCAGTTGGCACTGATAATGACAAGCGAGAAAAAATCCGTCAG
AAAAATGAGAGGAAGCATCAACGTCAGAAGGAAAGACGAGCACAAGAGCTGCATGAGAAA
TGTAGTGGCTATCTCATGTCAAGAAAGCTTGAAACACTTGCTGGGCAGTTTGTGGCTATG
GGGTTCTCTTCGGAACAGGCAACTTTGGCTCTTATTCTGAATGAAGGCAAAGTAGAAGAA
TCAGTAGCATGGTTATTAGAAGGAGGCGAAGAAGCAAACAAATACGAGACACGAAGTGCT
GATACTGAGGGTAATTTGAAAATTGACATATCAGAAGAGTTTGCTCGCATTGCGGACATG
GAAATTAGATTTAATTGCTCCAAGCAGGATGTCGAAAGAGCAATAGTAACCTGTGAGGGC
GATCTTGAGAGGGCTGAAGATATGTTGAGATCACAAAAGCAGGAGCCCCCCTCTGTGCCG
CCCAAACCAGAAGAAACTAGCCATCCTCCTACTATGGGCAACAACAAGATACCAATTGGC
GCCACCAAGAACTTAACAAGGATACATGTTAAACCTTCATCATCTAGTACAATACCAGCA
AAGACAGATGATAAAGAGTTCAATTATAGTAAAGTTGTTACCCCAGTAAGGCCTTCTATG
GATCCGGGGAGCAACAACATACCCTTGCTGGAAAGGACTGAGCCAAAATTGGACCGGGGC
AAGGCACCTCAGGTGTCCGTACCTGTTGACAAAAAGTTTCCAGATCCCGGATCAAATCCT
TCTGTTTCCTGTTCTTTGTCATCTTCTTTGCAGGTGTCACTTCCACCCGCCAAGACAGAA
GCTCATTATGTGGCTGCTGGAAATGAATTGAAGAATCTACCAGTAGGAACTGTGAGAGAA
CCAGTTATAGTCATGCAACAACCCTCGTCTGTCAATGCCAGGCACACTCCCACCTCAAAT
GTAAGCTCAATTCCAGAAACAGCAGAGCCGTTTTTTCCTATTAATATTGTTGGAACAGTG
AGACCCAGTGGTATGAATCCACATATAACTGGCACAAGAAGCTTGATCACTAATGATGTC
AGCTCTAACCACCAATTGTACAACCAACCTCATTATCAACAGCACCAACAACCAGAACAA
TTTGTTTCCATCTACGGGACACTCGAATCTCCAGGAACTAGCTGGGGAAATAATTTGTGG
AGTTGGACAGGTGGTTCATCACAGACACAATTGGTTCCTGCAACTTCATCACTCGGACTC
TTCTCCGGGTTGGGCACCCATGGTAATTATGGGCTGCCGTCTCCTGTTGACTGGAACAGC
GGTGGTGGTACAGTTCTGCACCTAGATTACAAAAACATAGACTGGAGTTTAGATCACGGT
TCGTCATCATCAGGAACAGGTGGTATGTGGCGAACAACAAACTCTTTATTGGAACACTAT
GATCCTAAATATGATTCATTTTACCGTGGAATCGCTGCAAAGTCTACTTCAAAACCTGTT
CTGACCAATGAGATTGGAGTTCCGAACCCCGGGTTGCAGGTTGGAGGAGTGAGTACAGCA
GAGACATCGGTGACAGGTGGTTCTCGTGAGTGGACGTCTGCGGCAGGTGGTTTTCATCAG
CAGACATCTGCAGCGGGTGGTTCTCGTCAGCAGACGTCTGCAGCAGGTGGTTTTCATCAG
CAGACATCTGCAGCGGGTGGTTCTCGTCAGCAGACGTCTGCAGCAGGTGGTTTTCATCAG
CAGACATCTGCAGCGGGTGGTTCTCGTCAGCAGACGTCTGCAGCAGGTGGTTTTCATCAG
CAGACATCTGCAGCGGGTGGTTCTCGTCAGCAGATGTCTGCAGCAGGTGGTTCTCATCAG
CAGACGTCTATGGTGGGTGGTTCCCATGAGTGGACGTCAGCGACGGGTGGTTATCATCAC
TGGACCTCTCCCTTTGAAGAGAGAGACCTTTTTAGCTTACCAAGGCAGTTTGTTTCTTCT
CCCTCCCTGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400047689
PEP Infomation

pacid=37466043 transcript=PGSC0003DMT400070540 locus=PGSC0003DMG400027415 ID=PGSC0003DMT400070540.v4.03 annot-version=v4.03
Sequence

MSRAARSKSKDKKVSKEPPKIASKPSSGSGYNPIFGTFQTYDPAPVTANVALHINGRFRS
IDERDDLSGHSHGAGGEYEIVSNNGSWSGEEDHKEKTSNLPLRQETSVGTDNDKREKIRQ
KNERKHQRQKERRAQELHEKCSGYLMSRKLETLAGQFVAMGFSSEQATLALILNEGKVEE
SVAWLLEGGEEANKYETRSADTEGNLKIDISEEFARIADMEIRFNCSKQDVERAIVTCEG
DLERAEDMLRSQKQEPPSVPPKPEETSHPPTMGNNKIPIGATKNLTRIHVKPSSSSTIPA
KTDDKEFNYSKVVTPVRPSMDPGSNNIPLLERTEPKLDRGKAPQVSVPVDKKFPDPGSNP
SVSCSLSSSLQVSLPPAKTEAHYVAAGNELKNLPVGTVREPVIVMQQPSSVNARHTPTSN
VSSIPETAEPFFPINIVGTVRPSGMNPHITGTRSLITNDVSSNHQLYNQPHYQQHQQPEQ
FVSIYGTLESPGTSWGNNLWSWTGGSSQTQLVPATSSLGLFSGLGTHGNYGLPSPVDWNS
GGGTVLHLDYKNIDWSLDHGSSSSGTGGMWRTTNSLLEHYDPKYDSFYRGIAAKSTSKPV
LTNEIGVPNPGLQVGGVSTAETSVTGGSREWTSAAGGFHQQTSAAGGSRQQTSAAGGFHQ
QTSAAGGSRQQTSAAGGFHQQTSAAGGSRQQTSAAGGFHQQTSAAGGSRQQMSAAGGSHQ
QTSMVGGSHEWTSATGGYHHWTSPFEERDLFSLPRQFVSSPSL*

Transcript Sequence

Transcript ID

PGSC0003DMT400070540
Transcript Infomation

pacid=37466043 locus=PGSC0003DMG400027415 ID=PGSC0003DMT400070540.v4.03 annot-version=v4.03
Sequence

ATGTCTCGAGCAGCCAGGTCCAAGTCAAAGGATAAAAAGGTGAGCAAAGAACCACCCAAA
ATTGCTTCAAAGCCTTCTAGTGGTAGTGGATACAATCCTATTTTTGGGACATTCCAAACA
TATGACCCAGCTCCCGTGACTGCAAATGTTGCTCTCCACATCAATGGTCGTTTCAGAAGC
ATTGATGAGAGAGATGACCTTAGTGGGCACTCTCATGGAGCTGGTGGAGAGTATGAAATT
GTTTCCAATAATGGTAGCTGGTCTGGTGAGGAGGACCACAAAGAGAAAACTTCTAATCTT
CCTCTCCGACAAGAAACCTCAGTTGGCACTGATAATGACAAGCGAGAAAAAATCCGTCAG
AAAAATGAGAGGAAGCATCAACGTCAGAAGGAAAGACGAGCACAAGAGCTGCATGAGAAA
TGTAGTGGCTATCTCATGTCAAGAAAGCTTGAAACACTTGCTGGGCAGTTTGTGGCTATG
GGGTTCTCTTCGGAACAGGCAACTTTGGCTCTTATTCTGAATGAAGGCAAAGTAGAAGAA
TCAGTAGCATGGTTATTAGAAGGAGGCGAAGAAGCAAACAAATACGAGACACGAAGTGCT
GATACTGAGGGTAATTTGAAAATTGACATATCAGAAGAGTTTGCTCGCATTGCGGACATG
GAAATTAGATTTAATTGCTCCAAGCAGGATGTCGAAAGAGCAATAGTAACCTGTGAGGGC
GATCTTGAGAGGGCTGAAGATATGTTGAGATCACAAAAGCAGGAGCCCCCCTCTGTGCCG
CCCAAACCAGAAGAAACTAGCCATCCTCCTACTATGGGCAACAACAAGATACCAATTGGC
GCCACCAAGAACTTAACAAGGATACATGTTAAACCTTCATCATCTAGTACAATACCAGCA
AAGACAGATGATAAAGAGTTCAATTATAGTAAAGTTGTTACCCCAGTAAGGCCTTCTATG
GATCCGGGGAGCAACAACATACCCTTGCTGGAAAGGACTGAGCCAAAATTGGACCGGGGC
AAGGCACCTCAGGTGTCCGTACCTGTTGACAAAAAGTTTCCAGATCCCGGATCAAATCCT
TCTGTTTCCTGTTCTTTGTCATCTTCTTTGCAGGTGTCACTTCCACCCGCCAAGACAGAA
GCTCATTATGTGGCTGCTGGAAATGAATTGAAGAATCTACCAGTAGGAACTGTGAGAGAA
CCAGTTATAGTCATGCAACAACCCTCGTCTGTCAATGCCAGGCACACTCCCACCTCAAAT
GTAAGCTCAATTCCAGAAACAGCAGAGCCGTTTTTTCCTATTAATATTGTTGGAACAGTG
AGACCCAGTGGTATGAATCCACATATAACTGGCACAAGAAGCTTGATCACTAATGATGTC
AGCTCTAACCACCAATTGTACAACCAACCTCATTATCAACAGCACCAACAACCAGAACAA
TTTGTTTCCATCTACGGGACACTCGAATCTCCAGGAACTAGCTGGGGAAATAATTTGTGG
AGTTGGACAGGTGGTTCATCACAGACACAATTGGTTCCTGCAACTTCATCACTCGGACTC
TTCTCCGGGTTGGGCACCCATGGTAATTATGGGCTGCCGTCTCCTGTTGACTGGAACAGC
GGTGGTGGTACAGTTCTGCACCTAGATTACAAAAACATAGACTGGAGTTTAGATCACGGT
TCGTCATCATCAGGAACAGGTGGTATGTGGCGAACAACAAACTCTTTATTGGAACACTAT
GATCCTAAATATGATTCATTTTACCGTGGAATCGCTGCAAAGTCTACTTCAAAACCTGTT
CTGACCAATGAGATTGGAGTTCCGAACCCCGGGTTGCAGGTTGGAGGAGTGAGTACAGCA
GAGACATCGGTGACAGGTGGTTCTCGTGAGTGGACGTCTGCGGCAGGTGGTTTTCATCAG
CAGACATCTGCAGCGGGTGGTTCTCGTCAGCAGACGTCTGCAGCAGGTGGTTTTCATCAG
CAGACATCTGCAGCGGGTGGTTCTCGTCAGCAGACGTCTGCAGCAGGTGGTTTTCATCAG
CAGACATCTGCAGCGGGTGGTTCTCGTCAGCAGACGTCTGCAGCAGGTGGTTTTCATCAG
CAGACATCTGCAGCGGGTGGTTCTCGTCAGCAGATGTCTGCAGCAGGTGGTTCTCATCAG
CAGACGTCTATGGTGGGTGGTTCCCATGAGTGGACGTCAGCGACGGGTGGTTATCATCAC
TGGACCTCTCCCTTTGAAGAGAGAGACCTTTTTAGCTTACCAAGGCAGTTTGTTTCTTCT
CCCTCCCTGTAG