Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400070487
CDS Infomation

pacid=37466656 polypeptide=PGSC0003DMP400047661 locus=PGSC0003DMG400027403 ID=PGSC0003DMT400070487.v4.03 annot-version=v4.03
Sequence

ATGGCGGAACCCAAAGTCAAATACGATCGACAGCTCAGGATATGGGGTGAGCAAGGACAA
GCTGCGCTGGAGAAAGCCAGTATCTGCTTACTTAACTGCGGTCCAACTGGTTCCGAAACT
TTGAAAAATCTTGTTCTTGGTGGGGTTGGAAGCATCACTGTTGTTGATGGTTCCAAGGTT
GAAGTGGGTGATCTTGGAAATAATTTCATGGTTGATGAATCAAGTGTTGGCGAATCGAAG
GCAAAGTGTGTGTGCACATTCCTTCAAGAGTTAAATGATGCTGTTAACGCCAAGTTTATA
GAAGATTGCCCTGAGGAACTGATTGAGACAAATCCATCATTCTTTTCTCAGTTTACCTTG
GTCATAGCTACACAGCTGGTTGAAGATTCCATGGTGAAATTGGACAGAATCTGTCGGGAG
GCAAATATTATTTTAATATTTGCACGTTCCTATGGTCTCATGGGTCTTGTCCGGATCAGT
GTGAAGGAACATACAGTAATTGAATCGAAGCCTGATCATTTTCTAGATGATCTTCGACTT
AATAACCCATGGCCAGAACTTACGAGGTTCACAGAAACGATTGATTTGAACACAACTGAT
GCTGTTGTACATAAACACACACCATATATTGTTATCCTTGTTAAGATAGCAGAGGAATGG
GCAAATACTCATGGTGGAAATCTTCCTTCAACCAGGGAAGAGAAAAGGGAATTCAAGGAT
TTAATTAAGTCCAAAATGATCACAGTGGATGAAGAGAACTATAAAGAAGCCATGGAAGCT
TCATACAAGGTCTTTTCTCCACGAGGAATTGGTGCAAACTTACAGAAGATTATTGATGAC
AGCTGTACAGAAGTTGATTCAAATTCATCTGATTTTTGGGTGATGGTAGCAGCACTGAAG
GAGTTCATAGCTAATGAAGGTGGTGGGGAGACACCTCTTGAGGGGTCGATACCAGATATG
ACATCATCAACTGAATTGTATGTAAACTTGCAAAAAACTTACCAAGCCAAGGCCGAGGCT
GATTTTCTTGTTATGGAGCAAAGAGTCAGGGATTTACTTAAGAAAATCGGTAGGGATCCA
GCCAGCATATCCAAGGCAAACATAAAGAGCTTCTCTAAAAATGCAAGGAAGCTTGCTGTT
TGCAGATATCGCCTCATTGAGGAGGAGTTCAACTCTCCTGTCCAATCAGAGTTACAGAAG
TATCTGACAGATGAGGATCATGGTACTGCTGCGGGTCTTTATATTCTTCTTCGAGCAGCT
GATCGGTTTGCTGTTAACTATAATAAATTTCCTGGTCAATTTGACAGTGAGATGGATGAG
GATATATCCCGGTTAAAAACTACAGCTGTTGGCCTACTCAATGACCTTGGTTGCAATAGC
TCCGCCTTATCAGAGGACCTTATTAATGAGATGTGCCGGTATGGTGCTTCTGAGCTTCAT
GTCGTGTCTGCCTTCGTCGGAGGAGTTGCATCACAAGAAGTAATCAAGCTCATCACGAGA
CAATTCATTCCCATGTCCGGGACATTCATCTTTAATGGGATTGATAACAATTCCCAGCTG
TTGTTGCTATAG

Peptide Sequence

PEP ID

PGSC0003DMP400047661
PEP Infomation

pacid=37466656 transcript=PGSC0003DMT400070487 locus=PGSC0003DMG400027403 ID=PGSC0003DMT400070487.v4.03 annot-version=v4.03
Sequence

MAEPKVKYDRQLRIWGEQGQAALEKASICLLNCGPTGSETLKNLVLGGVGSITVVDGSKV
EVGDLGNNFMVDESSVGESKAKCVCTFLQELNDAVNAKFIEDCPEELIETNPSFFSQFTL
VIATQLVEDSMVKLDRICREANIILIFARSYGLMGLVRISVKEHTVIESKPDHFLDDLRL
NNPWPELTRFTETIDLNTTDAVVHKHTPYIVILVKIAEEWANTHGGNLPSTREEKREFKD
LIKSKMITVDEENYKEAMEASYKVFSPRGIGANLQKIIDDSCTEVDSNSSDFWVMVAALK
EFIANEGGGETPLEGSIPDMTSSTELYVNLQKTYQAKAEADFLVMEQRVRDLLKKIGRDP
ASISKANIKSFSKNARKLAVCRYRLIEEEFNSPVQSELQKYLTDEDHGTAAGLYILLRAA
DRFAVNYNKFPGQFDSEMDEDISRLKTTAVGLLNDLGCNSSALSEDLINEMCRYGASELH
VVSAFVGGVASQEVIKLITRQFIPMSGTFIFNGIDNNSQLLLL*

Transcript Sequence

Transcript ID

PGSC0003DMT400070487
Transcript Infomation

pacid=37466656 locus=PGSC0003DMG400027403 ID=PGSC0003DMT400070487.v4.03 annot-version=v4.03
Sequence

ATGGCGGAACCCAAAGTCAAATACGATCGACAGCTCAGGATATGGGGTGAGCAAGGACAA
GCTGCGCTGGAGAAAGCCAGTATCTGCTTACTTAACTGCGGTCCAACTGGTTCCGAAACT
TTGAAAAATCTTGTTCTTGGTGGGGTTGGAAGCATCACTGTTGTTGATGGTTCCAAGGTT
GAAGTGGGTGATCTTGGAAATAATTTCATGGTTGATGAATCAAGTGTTGGCGAATCGAAG
GCAAAGTGTGTGTGCACATTCCTTCAAGAGTTAAATGATGCTGTTAACGCCAAGTTTATA
GAAGATTGCCCTGAGGAACTGATTGAGACAAATCCATCATTCTTTTCTCAGTTTACCTTG
GTCATAGCTACACAGCTGGTTGAAGATTCCATGGTGAAATTGGACAGAATCTGTCGGGAG
GCAAATATTATTTTAATATTTGCACGTTCCTATGGTCTCATGGGTCTTGTCCGGATCAGT
GTGAAGGAACATACAGTAATTGAATCGAAGCCTGATCATTTTCTAGATGATCTTCGACTT
AATAACCCATGGCCAGAACTTACGAGGTTCACAGAAACGATTGATTTGAACACAACTGAT
GCTGTTGTACATAAACACACACCATATATTGTTATCCTTGTTAAGATAGCAGAGGAATGG
GCAAATACTCATGGTGGAAATCTTCCTTCAACCAGGGAAGAGAAAAGGGAATTCAAGGAT
TTAATTAAGTCCAAAATGATCACAGTGGATGAAGAGAACTATAAAGAAGCCATGGAAGCT
TCATACAAGGTCTTTTCTCCACGAGGAATTGGTGCAAACTTACAGAAGATTATTGATGAC
AGCTGTACAGAAGTTGATTCAAATTCATCTGATTTTTGGGTGATGGTAGCAGCACTGAAG
GAGTTCATAGCTAATGAAGGTGGTGGGGAGACACCTCTTGAGGGGTCGATACCAGATATG
ACATCATCAACTGAATTGTATGTAAACTTGCAAAAAACTTACCAAGCCAAGGCCGAGGCT
GATTTTCTTGTTATGGAGCAAAGAGTCAGGGATTTACTTAAGAAAATCGGTAGGGATCCA
GCCAGCATATCCAAGGCAAACATAAAGAGCTTCTCTAAAAATGCAAGGAAGCTTGCTGTT
TGCAGATATCGCCTCATTGAGGAGGAGTTCAACTCTCCTGTCCAATCAGAGTTACAGAAG
TATCTGACAGATGAGGATCATGGTACTGCTGCGGGTCTTTATATTCTTCTTCGAGCAGCT
GATCGGTTTGCTGTTAACTATAATAAATTTCCTGGTCAATTTGACAGTGAGATGGATGAG
GATATATCCCGGTTAAAAACTACAGCTGTTGGCCTACTCAATGACCTTGGTTGCAATAGC
TCCGCCTTATCAGAGGACCTTATTAATGAGATGTGCCGGTATGGTGCTTCTGAGCTTCAT
GTCGTGTCTGCCTTCGTCGGAGGAGTTGCATCACAAGAAGTAATCAAGCTCATCACGAGA
CAATTCATTCCCATGTCCGGGACATTCATCTTTAATGGGATTGATAACAATTCCCAGCTG
TTGTTGCTATAG