Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400070465
CDS Infomation

pacid=37466813 polypeptide=PGSC0003DMP400047643 locus=PGSC0003DMG402027395 ID=PGSC0003DMT400070465.v4.03 annot-version=v4.03
Sequence

ATGTCTTCTTCAAAATTTGAACCAAATGATGACATATTTGATTTTGTAATCAAGAAAGCA
AATGGAATAAAAGGCCTAGTAGACACAAATCTTGAAATTATCCCAAATCAATGCATTCAA
CCAAAAGAACAAAGACTAGACAAGTCCCAAATTGATAATCAAGAATCAATCCCAATAATT
GATTTATCAAATTTTGATGATTTAAATGTTGAAAAGTCAATTCAAGAAGCAGCAAGCAAG
TGGGGTTTCTTCCAAATCATCAATCATGGGATCCCAACTGAAGTTCTTGAAGATTTGAAG
GATGCGGCACACAAATTCTTTGAATTGCCAGCTGAAGAAAAAGTTAAGTATCGTAAAGAA
AAACTTAGTCCGGGTGAATCTGTGTTTATGTTTTGGAGTGCTATTGGTGAGAAAGATGAG
AAAGTTTTGGAGTGGAGGGATGGTATAAAACATGGTTGTAATCCACAAAATGATAGCAAT
CTTTGGCCTCCTCAAACAAGGAACCAAGTTTTGGAGTATCAAAAGTGGGCTAAACCACTT
GCTAAAAAATTGCTTGAGGTGCTATTGAAGGGTCTCAATGTCAATGAAATTGACGAATCT
TTAGAACCTCTCTTTATGGGAACTATGTCTATAAACATCAACTACTATCCACCATGCCCA
AATCCAAATATCGCCATGGGTTTTCGTAGACACTGCGACATGGGCTGCATAATTTTGCTC
CTCCAGGACGACACGGGAGGCCTATATATCCGAGGGACTAAAGAAAACTGGATTCACGTA
AATCCTATCAAAGGTGCCTTAACAGTTAATATAGGTGACTCATTGCAGATCATGAGCAAT
GATCGATACAAGAGTATCGAGCATTGTGTAGCAGTTGATTCGAGCAGGACTCGAATATCT
GTACCGCTATGCGTGAATCCTAGTTTTGATAGTGTCATTGGTTCATTCCCACAAATGCTA
AAAGATGGAGAAAAACCAGTGTACAAAGATATTTTGTTCTCTGATTATTGGGATCATTGC
TTCATTAAGAGGCCTTCTGGTAAATCATCACTAGATTTTGCTAAAATTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400047643
PEP Infomation

pacid=37466813 transcript=PGSC0003DMT400070465 locus=PGSC0003DMG402027395 ID=PGSC0003DMT400070465.v4.03 annot-version=v4.03
Sequence

MSSSKFEPNDDIFDFVIKKANGIKGLVDTNLEIIPNQCIQPKEQRLDKSQIDNQESIPII
DLSNFDDLNVEKSIQEAASKWGFFQIINHGIPTEVLEDLKDAAHKFFELPAEEKVKYRKE
KLSPGESVFMFWSAIGEKDEKVLEWRDGIKHGCNPQNDSNLWPPQTRNQVLEYQKWAKPL
AKKLLEVLLKGLNVNEIDESLEPLFMGTMSININYYPPCPNPNIAMGFRRHCDMGCIILL
LQDDTGGLYIRGTKENWIHVNPIKGALTVNIGDSLQIMSNDRYKSIEHCVAVDSSRTRIS
VPLCVNPSFDSVIGSFPQMLKDGEKPVYKDILFSDYWDHCFIKRPSGKSSLDFAKI*

Transcript Sequence

Transcript ID

PGSC0003DMT400070465
Transcript Infomation

pacid=37466813 locus=PGSC0003DMG402027395 ID=PGSC0003DMT400070465.v4.03 annot-version=v4.03
Sequence

ATGTCTTCTTCAAAATTTGAACCAAATGATGACATATTTGATTTTGTAATCAAGAAAGCA
AATGGAATAAAAGGCCTAGTAGACACAAATCTTGAAATTATCCCAAATCAATGCATTCAA
CCAAAAGAACAAAGACTAGACAAGTCCCAAATTGATAATCAAGAATCAATCCCAATAATT
GATTTATCAAATTTTGATGATTTAAATGTTGAAAAGTCAATTCAAGAAGCAGCAAGCAAG
TGGGGTTTCTTCCAAATCATCAATCATGGGATCCCAACTGAAGTTCTTGAAGATTTGAAG
GATGCGGCACACAAATTCTTTGAATTGCCAGCTGAAGAAAAAGTTAAGTATCGTAAAGAA
AAACTTAGTCCGGGTGAATCTGTGTTTATGTTTTGGAGTGCTATTGGTGAGAAAGATGAG
AAAGTTTTGGAGTGGAGGGATGGTATAAAACATGGTTGTAATCCACAAAATGATAGCAAT
CTTTGGCCTCCTCAAACAAGGAACCAAGTTTTGGAGTATCAAAAGTGGGCTAAACCACTT
GCTAAAAAATTGCTTGAGGTGCTATTGAAGGGTCTCAATGTCAATGAAATTGACGAATCT
TTAGAACCTCTCTTTATGGGAACTATGTCTATAAACATCAACTACTATCCACCATGCCCA
AATCCAAATATCGCCATGGGTTTTCGTAGACACTGCGACATGGGCTGCATAATTTTGCTC
CTCCAGGACGACACGGGAGGCCTATATATCCGAGGGACTAAAGAAAACTGGATTCACGTA
AATCCTATCAAAGGTGCCTTAACAGTTAATATAGGTGACTCATTGCAGATCATGAGCAAT
GATCGATACAAGAGTATCGAGCATTGTGTAGCAGTTGATTCGAGCAGGACTCGAATATCT
GTACCGCTATGCGTGAATCCTAGTTTTGATAGTGTCATTGGTTCATTCCCACAAATGCTA
AAAGATGGAGAAAAACCAGTGTACAAAGATATTTTGTTCTCTGATTATTGGGATCATTGC
TTCATTAAGAGGCCTTCTGGTAAATCATCACTAGATTTTGCTAAAATTTAA