Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400070444
CDS Infomation

pacid=37465667 polypeptide=PGSC0003DMP400047625 locus=PGSC0003DMG400027387 ID=PGSC0003DMT400070444.v4.03 annot-version=v4.03
Sequence

ATGGCATCACTAGTTTCAAGTTGGTCTTCAGAAGTGAATTCAATTCCAGAAAAATATGTT
GTTCCACTAGAAAAAAGAATAAATGCAGATGTACCAATTGGTAAACATATTCCAGTTATT
GATTTATCACAATCTTCAACTCAATCTATTCAACAAATCATCAAAGCTTCTGCTGACTTT
GGTCTCTTTCAGGTGATCAACCATGGAGTGTCAGAAACCCTATTGGTTGATGCATTATCA
GTTTGCAAAGAGTTCTTTAAGTTGCCAATTGAAGACAAAGCAAAATTTGTTGAGAAAGAT
GAGGGCTTAAGTGATTTTGAACCATCAATTGACCAAAGGCCAAAGCTTTACATTGAAAAA
GAATACACACCAAACAAGAATGGTTCAAACACTAATAATGTCAAGGACACTGTCTTTTGG
AAAGACACTTTTGGACATGGTTGTCATCCTCTCACTCAAGATGTCATTAATTCTTGGCCT
GAAAAACCACAAAAATATAGAGAAGTGATAGGTGAATATGCATTGGAACTAAGGAAATTG
AGCTTAAGGATTTTGGACTTAATGTGTGAAGGACTTGGGCTTGAAGTTGGGTATTTTGGC
CAAGAACACAGCCAAACTCAACTCATGGTGACCCATCACTACCCACAATGCCCTGACCCA
AACTCAACAATAGGTATAGGTGAACATTGTGATGGTGCACTTATCAATTTGGTCCAACAA
GAACTAAGTGGATTGCATGTGAGAGACAAAAATGGCAAATGGTTTGGTGTTGAACCAATT
CCTGGTGCACTTGTTGTCATCAATGGTTTGATCTTAAAGGTTGTCACAAATGGAAAGCTA
TCATCTGGAGTGCATAGAGTTGTGACAAATTCAACATCTGATAGAACATCATTGGGCAGC
TTAATAAGTCCAATTGAGTGCATTATTGAACCTGCAAAATTACTTATAAATGAGAGCAAT
CCACCATTATTCAAATCATATTCATATACAGAATATTTGGGATATTATTTTAGTGACACC
ACTGAAATTGAAGCAGCATTGAAACCATATAAGCTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400047625
PEP Infomation

pacid=37465667 transcript=PGSC0003DMT400070444 locus=PGSC0003DMG400027387 ID=PGSC0003DMT400070444.v4.03 annot-version=v4.03
Sequence

MASLVSSWSSEVNSIPEKYVVPLEKRINADVPIGKHIPVIDLSQSSTQSIQQIIKASADF
GLFQVINHGVSETLLVDALSVCKEFFKLPIEDKAKFVEKDEGLSDFEPSIDQRPKLYIEK
EYTPNKNGSNTNNVKDTVFWKDTFGHGCHPLTQDVINSWPEKPQKYREVIGEYALELRKL
SLRILDLMCEGLGLEVGYFGQEHSQTQLMVTHHYPQCPDPNSTIGIGEHCDGALINLVQQ
ELSGLHVRDKNGKWFGVEPIPGALVVINGLILKVVTNGKLSSGVHRVVTNSTSDRTSLGS
LISPIECIIEPAKLLINESNPPLFKSYSYTEYLGYYFSDTTEIEAALKPYKL*

Transcript Sequence

Transcript ID

PGSC0003DMT400070444
Transcript Infomation

pacid=37465667 locus=PGSC0003DMG400027387 ID=PGSC0003DMT400070444.v4.03 annot-version=v4.03
Sequence

ATGGCATCACTAGTTTCAAGTTGGTCTTCAGAAGTGAATTCAATTCCAGAAAAATATGTT
GTTCCACTAGAAAAAAGAATAAATGCAGATGTACCAATTGGTAAACATATTCCAGTTATT
GATTTATCACAATCTTCAACTCAATCTATTCAACAAATCATCAAAGCTTCTGCTGACTTT
GGTCTCTTTCAGGTGATCAACCATGGAGTGTCAGAAACCCTATTGGTTGATGCATTATCA
GTTTGCAAAGAGTTCTTTAAGTTGCCAATTGAAGACAAAGCAAAATTTGTTGAGAAAGAT
GAGGGCTTAAGTGATTTTGAACCATCAATTGACCAAAGGCCAAAGCTTTACATTGAAAAA
GAATACACACCAAACAAGAATGGTTCAAACACTAATAATGTCAAGGACACTGTCTTTTGG
AAAGACACTTTTGGACATGGTTGTCATCCTCTCACTCAAGATGTCATTAATTCTTGGCCT
GAAAAACCACAAAAATATAGAGAAGTGATAGGTGAATATGCATTGGAACTAAGGAAATTG
AGCTTAAGGATTTTGGACTTAATGTGTGAAGGACTTGGGCTTGAAGTTGGGTATTTTGGC
CAAGAACACAGCCAAACTCAACTCATGGTGACCCATCACTACCCACAATGCCCTGACCCA
AACTCAACAATAGGTATAGGTGAACATTGTGATGGTGCACTTATCAATTTGGTCCAACAA
GAACTAAGTGGATTGCATGTGAGAGACAAAAATGGCAAATGGTTTGGTGTTGAACCAATT
CCTGGTGCACTTGTTGTCATCAATGGTTTGATCTTAAAGGTTGTCACAAATGGAAAGCTA
TCATCTGGAGTGCATAGAGTTGTGACAAATTCAACATCTGATAGAACATCATTGGGCAGC
TTAATAAGTCCAATTGAGTGCATTATTGAACCTGCAAAATTACTTATAAATGAGAGCAAT
CCACCATTATTCAAATCATATTCATATACAGAATATTTGGGATATTATTTTAGTGACACC
ACTGAAATTGAAGCAGCATTGAAACCATATAAGCTCTAA