Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400070424
CDS Infomation

pacid=37467142 polypeptide=PGSC0003DMP400047613 locus=PGSC0003DMG400027378 ID=PGSC0003DMT400070424.v4.03 annot-version=v4.03
Sequence

ATGGAAAGTTACAGAAAGTTTCTTTTGATCTTATTGCTACTAGTAGTGGTTTCTGTTGGT
ACTTCTTATGAAGTGGGAGAAGAGGAAAAATGGGGAGAAGGGTTGTTTTTGTTGCATGAT
TCAAAGGAGATAGTGAGGACTGATGCTGGAGTAATGAGAGTTGTGAGTAAGGGTGGATTT
AGTGGTGGTGAGGTTTCTATATTTCAGAGTCTAATGCATATTGGTTTTATCACCATGGAA
CCTAATACTCTTTTCATCCCTCAGTATCTGAATGCTCATCTTACACTCTTTGTTCGTAGA
GGGGAAACAAGAATTGGGCATATCTACAAGGATGACTTTACTGAAAGGCGATTGAAGGAA
GGAGATGTATACAGCATTCGTGCAGGATCTGCTTTTTATCTGGTTAATCCAGCTGAAGGG
CAAAGACTTCATATCATTTGCAGCATTAGCAACTCCAACACCTTAGGATTGTATGGTTTT
CAGTCTTTCTTCATTGGTGGTGGAATCTATCCAACATCTATTCTTAGTGGATTTGACACT
CTTACATTATCAACAGCATTCAATGTATCATCTGAAGAAGTGAGTGAGATCTTGACAAGA
CAACTTTCTGGTGCAATTGTACCTCTGAACACTACTCAGTCTCCTACACCAAGCATATGG
GCCAATTTCTTGAATCTTGAGCAGCACCAGAGACATGATCACCTAAAGAGAGTAGTGCAT
TTGGAGGAAGAAGCCAGTTTTGAAGAAGAAGATGAGGAAAGGGAGCAACAGCCAACATGG
TCTTTGAGGAAGTTTATGAATAATCTTTTTGGTCATGAAGGAAATAAAAGAAAGAAAGGC
GATGAAGGACGTAGAGGCAGTGGGAAAGGTCCAGATTCCTACAACCTGTTTGATAGGAAG
CCAGATTACAAGAATGATTATGGATGGAGCTTGGCCTTGGATCAATCTGAGTATTCTCCA
TTGAAACACTCTGACATCGGCGTCTACCTCGTCAATCTTTCAGCGGGAGCTATGATGGCA
CCACACATTAATCCAACAGCAACAGAGTATGGGATAGTGTTGAGAGGAAGTGGCAGCATC
CAAATCGTGTATCCAAACGGGACAATAGCAATGAATGCTGTAGTAAACGAAGGAGATGTA
TTCTGGGTGCCAAGGTACTTCCCCTTCTGTCAAATTGCATCAAGAACAGGACCGTTCGAG
TTCTTTGGATTCACGACCACAGCAAGGAAGAACATGCCACAGTTCTTGGTGGGTCAGAAT
TCGATACTTCAGAGCATGAGAGGACCTGAATTTGCAGCTGCATTTGGTGTTAGTGAAGAG
AGGTTAAGGAAGATTTTGGATGCTCAGCGTGAGGCGGTAATTTTTCCGTCGGCGTCGGTT
GCTCCCTCGGAGCCTATGGATCCGAAGGGGGAGGAGGAAGAGGGAGAAAGAGGAGAGAAG
GGAAAAGAGAAGAAGAAGATGAAGGATGTGATGAAGATACCAGAAGTGATTAAGAGCTTA
GGCAATGACATGATGATGGGATTTGCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400047613
PEP Infomation

pacid=37467142 transcript=PGSC0003DMT400070424 locus=PGSC0003DMG400027378 ID=PGSC0003DMT400070424.v4.03 annot-version=v4.03
Sequence

MESYRKFLLILLLLVVVSVGTSYEVGEEEKWGEGLFLLHDSKEIVRTDAGVMRVVSKGGF
SGGEVSIFQSLMHIGFITMEPNTLFIPQYLNAHLTLFVRRGETRIGHIYKDDFTERRLKE
GDVYSIRAGSAFYLVNPAEGQRLHIICSISNSNTLGLYGFQSFFIGGGIYPTSILSGFDT
LTLSTAFNVSSEEVSEILTRQLSGAIVPLNTTQSPTPSIWANFLNLEQHQRHDHLKRVVH
LEEEASFEEEDEEREQQPTWSLRKFMNNLFGHEGNKRKKGDEGRRGSGKGPDSYNLFDRK
PDYKNDYGWSLALDQSEYSPLKHSDIGVYLVNLSAGAMMAPHINPTATEYGIVLRGSGSI
QIVYPNGTIAMNAVVNEGDVFWVPRYFPFCQIASRTGPFEFFGFTTTARKNMPQFLVGQN
SILQSMRGPEFAAAFGVSEERLRKILDAQREAVIFPSASVAPSEPMDPKGEEEEGERGEK
GKEKKKMKDVMKIPEVIKSLGNDMMMGFA*

Transcript Sequence

Transcript ID

PGSC0003DMT400070424
Transcript Infomation

pacid=37467142 locus=PGSC0003DMG400027378 ID=PGSC0003DMT400070424.v4.03 annot-version=v4.03
Sequence

ATGGAAAGTTACAGAAAGTTTCTTTTGATCTTATTGCTACTAGTAGTGGTTTCTGTTGGT
ACTTCTTATGAAGTGGGAGAAGAGGAAAAATGGGGAGAAGGGTTGTTTTTGTTGCATGAT
TCAAAGGAGATAGTGAGGACTGATGCTGGAGTAATGAGAGTTGTGAGTAAGGGTGGATTT
AGTGGTGGTGAGGTTTCTATATTTCAGAGTCTAATGCATATTGGTTTTATCACCATGGAA
CCTAATACTCTTTTCATCCCTCAGTATCTGAATGCTCATCTTACACTCTTTGTTCGTAGA
GGGGAAACAAGAATTGGGCATATCTACAAGGATGACTTTACTGAAAGGCGATTGAAGGAA
GGAGATGTATACAGCATTCGTGCAGGATCTGCTTTTTATCTGGTTAATCCAGCTGAAGGG
CAAAGACTTCATATCATTTGCAGCATTAGCAACTCCAACACCTTAGGATTGTATGGTTTT
CAGTCTTTCTTCATTGGTGGTGGAATCTATCCAACATCTATTCTTAGTGGATTTGACACT
CTTACATTATCAACAGCATTCAATGTATCATCTGAAGAAGTGAGTGAGATCTTGACAAGA
CAACTTTCTGGTGCAATTGTACCTCTGAACACTACTCAGTCTCCTACACCAAGCATATGG
GCCAATTTCTTGAATCTTGAGCAGCACCAGAGACATGATCACCTAAAGAGAGTAGTGCAT
TTGGAGGAAGAAGCCAGTTTTGAAGAAGAAGATGAGGAAAGGGAGCAACAGCCAACATGG
TCTTTGAGGAAGTTTATGAATAATCTTTTTGGTCATGAAGGAAATAAAAGAAAGAAAGGC
GATGAAGGACGTAGAGGCAGTGGGAAAGGTCCAGATTCCTACAACCTGTTTGATAGGAAG
CCAGATTACAAGAATGATTATGGATGGAGCTTGGCCTTGGATCAATCTGAGTATTCTCCA
TTGAAACACTCTGACATCGGCGTCTACCTCGTCAATCTTTCAGCGGGAGCTATGATGGCA
CCACACATTAATCCAACAGCAACAGAGTATGGGATAGTGTTGAGAGGAAGTGGCAGCATC
CAAATCGTGTATCCAAACGGGACAATAGCAATGAATGCTGTAGTAAACGAAGGAGATGTA
TTCTGGGTGCCAAGGTACTTCCCCTTCTGTCAAATTGCATCAAGAACAGGACCGTTCGAG
TTCTTTGGATTCACGACCACAGCAAGGAAGAACATGCCACAGTTCTTGGTGGGTCAGAAT
TCGATACTTCAGAGCATGAGAGGACCTGAATTTGCAGCTGCATTTGGTGTTAGTGAAGAG
AGGTTAAGGAAGATTTTGGATGCTCAGCGTGAGGCGGTAATTTTTCCGTCGGCGTCGGTT
GCTCCCTCGGAGCCTATGGATCCGAAGGGGGAGGAGGAAGAGGGAGAAAGAGGAGAGAAG
GGAAAAGAGAAGAAGAAGATGAAGGATGTGATGAAGATACCAGAAGTGATTAAGAGCTTA
GGCAATGACATGATGATGGGATTTGCTTAG