Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400070406
CDS Infomation

pacid=37466969 polypeptide=PGSC0003DMP400047600 locus=PGSC0003DMG400027373 ID=PGSC0003DMT400070406.v4.03 annot-version=v4.03
Sequence

ATGGACATGGACTCTGAAGACCTGAAAACTCTCGCCGCCGAGCAACGCCGGGAACTCATG
GCGGCGCGTGACGTCGATCTCGACTTTGATTTCGCTTATCAACTTCAACTCCAAGAAGCT
ATCGATGTCTCCCTCTCTATGCAACCCTCCACTTCCACCGCTGCACCACCTACCCCCACC
CTACTTCAACCCCAACCGAATTCCTCTTCAGCGAACGACGGAATTTCGAAGTTCGCCGAC
GTGCAATTTTCGGAAATCTTGCAACTTGAACGAGAAATCGATGATCGCAGGCTTAGCGAA
TTGGAATTCAGGATTATGCGTGATGACCTTCAGCGTCGAATTCATGATCATCGTGTTGCT
CAAGAGATTCTTCGTATGCCGGAGGATGAGTGGCAGGATAATGGAGACAATTTTGAGCTT
CCTTTTGGAGAAGGAACATCCAAAAGTGAAGATAAAGAGCTTTTTAGGGTTTATTTCAAG
GGTTTAGTGGAGAATTTTCGTCCAAATGTGGTTTTTGGTGGGATTGGAGTTGCCATTTGT
GATTCCAGAGATGAATTATTGTTCGAAATGAGGAAGCCGTTTTTTGGAAATGCAATGAAT
CGCCAGTGCATTGAGTTTAAGGCCCTTATTGAAGGTTTGAATGCTGCAATCGCCTTGGAT
TTGAGAAGGGTCGTTTTCTATTGTGATTACTTTCCTATATTCCAGTTTGTTACAGGCAGA
TGGTCAGCCAAACAGCGGAAGGTTGCTGCTTTACTAAATCAAGTGGCTTTGCTTCGACTA
AAGTTTTCATTTTGCCAGCCGTCTCTTGTGCCTCGAAATGAAATTAAGTTTGCATTTAAA
TTTGCAAGAGAGGCAATGACTTCTCAGGTTGAGAAAGTCGCAGAGACAGCTGCTTCAAGG
AATATGTACGAAACTTGTGCTATTTGTTTTGAAGAGACTAATTTTGGTCAGATTTTCTCG
GTTGATGATTGTAGACACCGTTATTGTGTCTCCTGTATGAAACAACATGTTGAAGTGAAG
CTGCTTCATGGTATAGTGCCTAAGTGTCCTCATGCAGAGTGCAATTCAGATTTGAAACTG
GATAGCTGCAGTAACATTTTGACACCAAAGTTAATTGATATTATGAAGCAACGTATCAAG
GAAGCTTCTATCCCTGTAACTGAAAAAGTTTACTGCCCTTACCCGAAGTGCTCGGCACTA
ATGTCAAAATCTGAAGTTTTAGAATATACTAAGGGTTCCTTTTTGGGAGCTGAAAGACTT
GGAATCAGTAAATGTACAAAATGCAATGGCCTGTTTTGTGTCAATTGCAAAGTTCCTTGG
CACTACAATATCGCGTGCGATGAGTACAGAAAGAGAAATCCTAATCCTCCGGAAGATCTT
AAGTTGAAAACCCTGGCAGAAACGAATTTGTGGCGCCAATGTGTAAAGTGCAACCACATG
ATTGAACTTGCAGCAGGGTGCTACCACATAACTTGCAGATGTGGGTATGAATTTTGTTAT
ACATGTGGAGCACCGTGGATGGACAAGAAAGCAACTTGCTCCTGTAAGCTTTGGGATGAG
GACAACATTTTAGATGACGATAACGATGATGATGACGATGACAATGACGATGATGATTAT
GAAACTGATTATGAAACCGATTATGATGATTACTACTTCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400047600
PEP Infomation

pacid=37466969 transcript=PGSC0003DMT400070406 locus=PGSC0003DMG400027373 ID=PGSC0003DMT400070406.v4.03 annot-version=v4.03
Sequence

MDMDSEDLKTLAAEQRRELMAARDVDLDFDFAYQLQLQEAIDVSLSMQPSTSTAAPPTPT
LLQPQPNSSSANDGISKFADVQFSEILQLEREIDDRRLSELEFRIMRDDLQRRIHDHRVA
QEILRMPEDEWQDNGDNFELPFGEGTSKSEDKELFRVYFKGLVENFRPNVVFGGIGVAIC
DSRDELLFEMRKPFFGNAMNRQCIEFKALIEGLNAAIALDLRRVVFYCDYFPIFQFVTGR
WSAKQRKVAALLNQVALLRLKFSFCQPSLVPRNEIKFAFKFAREAMTSQVEKVAETAASR
NMYETCAICFEETNFGQIFSVDDCRHRYCVSCMKQHVEVKLLHGIVPKCPHAECNSDLKL
DSCSNILTPKLIDIMKQRIKEASIPVTEKVYCPYPKCSALMSKSEVLEYTKGSFLGAERL
GISKCTKCNGLFCVNCKVPWHYNIACDEYRKRNPNPPEDLKLKTLAETNLWRQCVKCNHM
IELAAGCYHITCRCGYEFCYTCGAPWMDKKATCSCKLWDEDNILDDDNDDDDDDNDDDDY
ETDYETDYDDYYF*

Transcript Sequence

Transcript ID

PGSC0003DMT400070406
Transcript Infomation

pacid=37466969 locus=PGSC0003DMG400027373 ID=PGSC0003DMT400070406.v4.03 annot-version=v4.03
Sequence

ATGGACATGGACTCTGAAGACCTGAAAACTCTCGCCGCCGAGCAACGCCGGGAACTCATG
GCGGCGCGTGACGTCGATCTCGACTTTGATTTCGCTTATCAACTTCAACTCCAAGAAGCT
ATCGATGTCTCCCTCTCTATGCAACCCTCCACTTCCACCGCTGCACCACCTACCCCCACC
CTACTTCAACCCCAACCGAATTCCTCTTCAGCGAACGACGGAATTTCGAAGTTCGCCGAC
GTGCAATTTTCGGAAATCTTGCAACTTGAACGAGAAATCGATGATCGCAGGCTTAGCGAA
TTGGAATTCAGGATTATGCGTGATGACCTTCAGCGTCGAATTCATGATCATCGTGTTGCT
CAAGAGATTCTTCGTATGCCGGAGGATGAGTGGCAGGATAATGGAGACAATTTTGAGCTT
CCTTTTGGAGAAGGAACATCCAAAAGTGAAGATAAAGAGCTTTTTAGGGTTTATTTCAAG
GGTTTAGTGGAGAATTTTCGTCCAAATGTGGTTTTTGGTGGGATTGGAGTTGCCATTTGT
GATTCCAGAGATGAATTATTGTTCGAAATGAGGAAGCCGTTTTTTGGAAATGCAATGAAT
CGCCAGTGCATTGAGTTTAAGGCCCTTATTGAAGGTTTGAATGCTGCAATCGCCTTGGAT
TTGAGAAGGGTCGTTTTCTATTGTGATTACTTTCCTATATTCCAGTTTGTTACAGGCAGA
TGGTCAGCCAAACAGCGGAAGGTTGCTGCTTTACTAAATCAAGTGGCTTTGCTTCGACTA
AAGTTTTCATTTTGCCAGCCGTCTCTTGTGCCTCGAAATGAAATTAAGTTTGCATTTAAA
TTTGCAAGAGAGGCAATGACTTCTCAGGTTGAGAAAGTCGCAGAGACAGCTGCTTCAAGG
AATATGTACGAAACTTGTGCTATTTGTTTTGAAGAGACTAATTTTGGTCAGATTTTCTCG
GTTGATGATTGTAGACACCGTTATTGTGTCTCCTGTATGAAACAACATGTTGAAGTGAAG
CTGCTTCATGGTATAGTGCCTAAGTGTCCTCATGCAGAGTGCAATTCAGATTTGAAACTG
GATAGCTGCAGTAACATTTTGACACCAAAGTTAATTGATATTATGAAGCAACGTATCAAG
GAAGCTTCTATCCCTGTAACTGAAAAAGTTTACTGCCCTTACCCGAAGTGCTCGGCACTA
ATGTCAAAATCTGAAGTTTTAGAATATACTAAGGGTTCCTTTTTGGGAGCTGAAAGACTT
GGAATCAGTAAATGTACAAAATGCAATGGCCTGTTTTGTGTCAATTGCAAAGTTCCTTGG
CACTACAATATCGCGTGCGATGAGTACAGAAAGAGAAATCCTAATCCTCCGGAAGATCTT
AAGTTGAAAACCCTGGCAGAAACGAATTTGTGGCGCCAATGTGTAAAGTGCAACCACATG
ATTGAACTTGCAGCAGGGTGCTACCACATAACTTGCAGATGTGGGTATGAATTTTGTTAT
ACATGTGGAGCACCGTGGATGGACAAGAAAGCAACTTGCTCCTGTAAGCTTTGGGATGAG
GACAACATTTTAGATGACGATAACGATGATGATGACGATGACAATGACGATGATGATTAT
GAAACTGATTATGAAACCGATTATGATGATTACTACTTCTGA