Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400070323
CDS Infomation

pacid=37465587 polypeptide=PGSC0003DMP400047543 locus=PGSC0003DMG400027343 ID=PGSC0003DMT400070323.v4.03 annot-version=v4.03
Sequence

ATGGACGTGATCTTCTCTTCCTCTCAAGCTTTGTTGAATGCTCATAGTGGCATTACTAGC
CATGTTGGATTCATTAGGCAACAACCTAGAACTCCTTTGGTTGTACAATTTCTAAGAATA
ATTTTATATGTTTGCTTGGCCTTATCATTTATGTTATTTGTTGAAAGACTTTACATGGGA
ATTGTCATAGCATTTGTAAAGTTGTTTAGAAGAAAACCAGAGAAGAAGTACAAGTGGGAG
CCACTTAAGGGTGATTTGGAATTGGGAAATTATTCATATCCTATGGTTTTAGTGCAATTA
CCAATGTGCAATGAAAAAGAGGTGTATCAATTGTCCATTGGAGCTGCTTGTAACCTTTCA
TGGCCAGCCAATAGAATTTTCATCCAAGTTCTTGATGATTCTACTGACCCTACAATTAAG
GCGTTGGTGGAGCAAGAGTGCAGGAAATGGGCAAGCAAAGGAGTTAACATTAAGTATGAG
ATAAGAGATAACAGGAAAGGATACAAAGCTGGGGCTCTTAGAGAAGGAATGAAGCATAAT
TATGTGAAGCTTTGTAGTCATGTGGCCATCTTTGATGCTGATTTTCAACCCGAGCCCGAT
TTCTTGGAGCGTAGCATCCCGTTTCTTGTGCACAATCCTGAAATCGGACTCGTTCAAGCT
CGTTGGGAATTTGTGAATGCTGATGAGTGCTTGATGACAAAAATGCAAGAAATGTCATTT
GGTTACCATTTCACAGTGGAGCAAGAAGTTGGATCTACAGCTCATGCATTTTTTGGCTTC
AATGGCACTGCTGGGGTTTGGAGAATGTCAGCTCTTAATGAGGCAGGGGGATGGAAAGAC
AGAACAACTGTGGAAGACATGGATCTAGCAGTACGAGCCGGTCTGAACGGCTGGAAATTC
GTCTATGTTGATGACCTTAAGGTGAAAAGTGAATTGCCAAGCACGTTCAGGGCCTATCGC
AATCAGCAACACAGATGGTCTTGTGGACCTGCTAATCTTTTCAGAAAAATGGCAATGGAA
ATTGCAACTAACAAGAAAGTTTCTGTATGGAAGAAATTTTACCTGATTTACAGCTTCTTC
TTTGTACGAAAGATCATAGCACACGTCGTGACATTCATCTTATATTGCGTTGTTATTCCT
GCAACGATTTTCATCCCTGAAGTCCAAGTACCTAGATGGGGAACTATATACATTCCTACA
GCTATCACTCTTCTCAATATACTTGGCTCCGCAAGATCAATGCAATTGGTGGTTTATTGG
ATCCTATTTGAGAATGTAATGTCCCTTCATCGGACAAAAGCAACGTTCATTGGCCTTTTC
GAATCAGGGAGAGTCAATGAATGGATCGTGACAGAGAAACTCGGAGATGCTCTTAAGACC
AAAAAGGGCTCAAAAGCACTGAAGAAACTTCAGTTTCGAGTTGGAGAAAGGGTACATGTT
CTTGAGCTTTTCGTTGGGTTGTACCTGCTGTTTTGTGGGTGGTACGACTATTCGTTTGGA
AGGAACAGGTTCTACGTATACCTCTTACTCCAAGCTATGGCGTTTTTCGTTGTTGGATTT
GGTTATGTTGGTGTGTTTGTTCCAAATTCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400047543
PEP Infomation

pacid=37465587 transcript=PGSC0003DMT400070323 locus=PGSC0003DMG400027343 ID=PGSC0003DMT400070323.v4.03 annot-version=v4.03
Sequence

MDVIFSSSQALLNAHSGITSHVGFIRQQPRTPLVVQFLRIILYVCLALSFMLFVERLYMG
IVIAFVKLFRRKPEKKYKWEPLKGDLELGNYSYPMVLVQLPMCNEKEVYQLSIGAACNLS
WPANRIFIQVLDDSTDPTIKALVEQECRKWASKGVNIKYEIRDNRKGYKAGALREGMKHN
YVKLCSHVAIFDADFQPEPDFLERSIPFLVHNPEIGLVQARWEFVNADECLMTKMQEMSF
GYHFTVEQEVGSTAHAFFGFNGTAGVWRMSALNEAGGWKDRTTVEDMDLAVRAGLNGWKF
VYVDDLKVKSELPSTFRAYRNQQHRWSCGPANLFRKMAMEIATNKKVSVWKKFYLIYSFF
FVRKIIAHVVTFILYCVVIPATIFIPEVQVPRWGTIYIPTAITLLNILGSARSMQLVVYW
ILFENVMSLHRTKATFIGLFESGRVNEWIVTEKLGDALKTKKGSKALKKLQFRVGERVHV
LELFVGLYLLFCGWYDYSFGRNRFYVYLLLQAMAFFVVGFGYVGVFVPNS*

Transcript Sequence

Transcript ID

PGSC0003DMT400070323
Transcript Infomation

pacid=37465587 locus=PGSC0003DMG400027343 ID=PGSC0003DMT400070323.v4.03 annot-version=v4.03
Sequence

ATGGACGTGATCTTCTCTTCCTCTCAAGCTTTGTTGAATGCTCATAGTGGCATTACTAGC
CATGTTGGATTCATTAGGCAACAACCTAGAACTCCTTTGGTTGTACAATTTCTAAGAATA
ATTTTATATGTTTGCTTGGCCTTATCATTTATGTTATTTGTTGAAAGACTTTACATGGGA
ATTGTCATAGCATTTGTAAAGTTGTTTAGAAGAAAACCAGAGAAGAAGTACAAGTGGGAG
CCACTTAAGGGTGATTTGGAATTGGGAAATTATTCATATCCTATGGTTTTAGTGCAATTA
CCAATGTGCAATGAAAAAGAGGTGTATCAATTGTCCATTGGAGCTGCTTGTAACCTTTCA
TGGCCAGCCAATAGAATTTTCATCCAAGTTCTTGATGATTCTACTGACCCTACAATTAAG
GCGTTGGTGGAGCAAGAGTGCAGGAAATGGGCAAGCAAAGGAGTTAACATTAAGTATGAG
ATAAGAGATAACAGGAAAGGATACAAAGCTGGGGCTCTTAGAGAAGGAATGAAGCATAAT
TATGTGAAGCTTTGTAGTCATGTGGCCATCTTTGATGCTGATTTTCAACCCGAGCCCGAT
TTCTTGGAGCGTAGCATCCCGTTTCTTGTGCACAATCCTGAAATCGGACTCGTTCAAGCT
CGTTGGGAATTTGTGAATGCTGATGAGTGCTTGATGACAAAAATGCAAGAAATGTCATTT
GGTTACCATTTCACAGTGGAGCAAGAAGTTGGATCTACAGCTCATGCATTTTTTGGCTTC
AATGGCACTGCTGGGGTTTGGAGAATGTCAGCTCTTAATGAGGCAGGGGGATGGAAAGAC
AGAACAACTGTGGAAGACATGGATCTAGCAGTACGAGCCGGTCTGAACGGCTGGAAATTC
GTCTATGTTGATGACCTTAAGGTGAAAAGTGAATTGCCAAGCACGTTCAGGGCCTATCGC
AATCAGCAACACAGATGGTCTTGTGGACCTGCTAATCTTTTCAGAAAAATGGCAATGGAA
ATTGCAACTAACAAGAAAGTTTCTGTATGGAAGAAATTTTACCTGATTTACAGCTTCTTC
TTTGTACGAAAGATCATAGCACACGTCGTGACATTCATCTTATATTGCGTTGTTATTCCT
GCAACGATTTTCATCCCTGAAGTCCAAGTACCTAGATGGGGAACTATATACATTCCTACA
GCTATCACTCTTCTCAATATACTTGGCTCCGCAAGATCAATGCAATTGGTGGTTTATTGG
ATCCTATTTGAGAATGTAATGTCCCTTCATCGGACAAAAGCAACGTTCATTGGCCTTTTC
GAATCAGGGAGAGTCAATGAATGGATCGTGACAGAGAAACTCGGAGATGCTCTTAAGACC
AAAAAGGGCTCAAAAGCACTGAAGAAACTTCAGTTTCGAGTTGGAGAAAGGGTACATGTT
CTTGAGCTTTTCGTTGGGTTGTACCTGCTGTTTTGTGGGTGGTACGACTATTCGTTTGGA
AGGAACAGGTTCTACGTATACCTCTTACTCCAAGCTATGGCGTTTTTCGTTGTTGGATTT
GGTTATGTTGGTGTGTTTGTTCCAAATTCTTGA