Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400070265
CDS Infomation

pacid=37465015 polypeptide=PGSC0003DMP400047503 locus=PGSC0003DMG400027321 ID=PGSC0003DMT400070265.v4.03 annot-version=v4.03
Sequence

ATGCACTCGACGAACTTGCTCCTCGAAGAACCGATTCGGATGGCTTCGATTCTCGAGCCA
TCAAAGCCTACGTTTTTTCCTGCAATGACGAAGATTGTCGGCACGCTGGGTCCGAAATCA
CGTTCTGTGGAGATTATCTCTAGTTGCCTTGAATCGGGAATGTCTGTGGCACGATTTGAC
TTTTCATGGGGAGATGCTGAATTTCACCAAGAGACATTGGAAAATCTAAGGGCAGCCGTC
AAAAAATCAAAGAAGCTCTGTGCGGTTATGCTAGACACTGGTGGTCCTGAATTACAAGTT
GTCAATAAGAGCGAACACCCAATTTCACTCCAAGCAGATGCCTTAGTTGTCCTGACACCT
GATCAAGATAAAGAGGCTACACCAAATCTACTGCCAATAAATTTTAGTGGCCTATCAAAG
TCAGTGAAGAAAGGAGACACTATTTTCATTGGTCAGTACTTGTTCACGGGAAGTGAGACT
ACCTCTGTGTGGCTAGAGGTTACAGAGGTGAAAGGAGAGGATGTCGTTTGCTTGATTAAA
AATTCTGCCACCTTGGCCGGACCATTGTACACATTACATGTCTCCCAGATCCGTATTGAG
TTGCCAACTCTCACTGACAAAGATAAGAAGGTTATAAGCAGTTGGGCTGTTCGAAACAAA
ATAGATATCCTTTCACTGTCATACACACGAAATGCTGAAGATGTTCGACATGCTCGTGAA
TTTCTATCTAAGCTGGGTGATCTTAATCAAACACAGATTTTTGCTAAGATAGAAAATGTG
GAGGGAATGGGCAACTTTGACGAGATTCTCGGAGAAGCTGATGGCATCATTCTCTCTCGT
GGAAATTTAGGGATAGATCTACCACCTGAGAAGGTGTTCCTATTTCAAAAGGCAGCTGTT
CACAGGTGCAATATGGCTGGTAAACCTGCTGTGGTCACTCGTGTTGTGGACAGTATGACT
GATAACTTGCGACCCACTCGTGCTGAGGCAACAGATGTTGCCAACGCTGTATTGGATGGT
ACTGATGCAATTCTTCTAGGTGCAGAGACCCTGAGAGGCCTATATCCTGTTGAGACTATT
TCCACTGTTGGTAAAATATGTGCAGAGGCAGAAAAGGTTTATAATCAAGATGTCTATTTT
AAGAGGGCTGTTAAGTGTGTGGGAGAACCAATGAGTCACTTGGAATCTATTGCTTCCTCT
GCGGTACGTGCTGCCATTAAGGTCAAGGCATCTGTTATTATCTGCTTCACTTCTTCAGGG
AGAGCTGCGAGATTGATAGCTAAGTATAGGCCACCGATGCCAGTTTTGTCTGTTGTCATT
CCTCGTCTCAAGACAAACCAACTCCGCTGGACATTCAGTGGTGCATTTCAGGCTAGGCAG
TCTCTTATTGTTAGAGGGATTTTCCCCATCCTTGCAGATCCAAGACATCCGGCTGAGTCC
ACAAATGCAACCGATGAGTCGATATTGAAGGTTGCACTAGACCATGGGAAAACAGCTGGT
GTTATAATGCCGCATGACCGAGTTGTTGTTTTCCAGAAAGTTGGTGACTCATCTGTGGTG
AAGATCATTGAGCTTGAAAATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400047503
PEP Infomation

pacid=37465015 transcript=PGSC0003DMT400070265 locus=PGSC0003DMG400027321 ID=PGSC0003DMT400070265.v4.03 annot-version=v4.03
Sequence

MHSTNLLLEEPIRMASILEPSKPTFFPAMTKIVGTLGPKSRSVEIISSCLESGMSVARFD
FSWGDAEFHQETLENLRAAVKKSKKLCAVMLDTGGPELQVVNKSEHPISLQADALVVLTP
DQDKEATPNLLPINFSGLSKSVKKGDTIFIGQYLFTGSETTSVWLEVTEVKGEDVVCLIK
NSATLAGPLYTLHVSQIRIELPTLTDKDKKVISSWAVRNKIDILSLSYTRNAEDVRHARE
FLSKLGDLNQTQIFAKIENVEGMGNFDEILGEADGIILSRGNLGIDLPPEKVFLFQKAAV
HRCNMAGKPAVVTRVVDSMTDNLRPTRAEATDVANAVLDGTDAILLGAETLRGLYPVETI
STVGKICAEAEKVYNQDVYFKRAVKCVGEPMSHLESIASSAVRAAIKVKASVIICFTSSG
RAARLIAKYRPPMPVLSVVIPRLKTNQLRWTFSGAFQARQSLIVRGIFPILADPRHPAES
TNATDESILKVALDHGKTAGVIMPHDRVVVFQKVGDSSVVKIIELEN*

Transcript Sequence

Transcript ID

PGSC0003DMT400070265
Transcript Infomation

pacid=37465015 locus=PGSC0003DMG400027321 ID=PGSC0003DMT400070265.v4.03 annot-version=v4.03
Sequence

ATGCACTCGACGAACTTGCTCCTCGAAGAACCGATTCGGATGGCTTCGATTCTCGAGCCA
TCAAAGCCTACGTTTTTTCCTGCAATGACGAAGATTGTCGGCACGCTGGGTCCGAAATCA
CGTTCTGTGGAGATTATCTCTAGTTGCCTTGAATCGGGAATGTCTGTGGCACGATTTGAC
TTTTCATGGGGAGATGCTGAATTTCACCAAGAGACATTGGAAAATCTAAGGGCAGCCGTC
AAAAAATCAAAGAAGCTCTGTGCGGTTATGCTAGACACTGGTGGTCCTGAATTACAAGTT
GTCAATAAGAGCGAACACCCAATTTCACTCCAAGCAGATGCCTTAGTTGTCCTGACACCT
GATCAAGATAAAGAGGCTACACCAAATCTACTGCCAATAAATTTTAGTGGCCTATCAAAG
TCAGTGAAGAAAGGAGACACTATTTTCATTGGTCAGTACTTGTTCACGGGAAGTGAGACT
ACCTCTGTGTGGCTAGAGGTTACAGAGGTGAAAGGAGAGGATGTCGTTTGCTTGATTAAA
AATTCTGCCACCTTGGCCGGACCATTGTACACATTACATGTCTCCCAGATCCGTATTGAG
TTGCCAACTCTCACTGACAAAGATAAGAAGGTTATAAGCAGTTGGGCTGTTCGAAACAAA
ATAGATATCCTTTCACTGTCATACACACGAAATGCTGAAGATGTTCGACATGCTCGTGAA
TTTCTATCTAAGCTGGGTGATCTTAATCAAACACAGATTTTTGCTAAGATAGAAAATGTG
GAGGGAATGGGCAACTTTGACGAGATTCTCGGAGAAGCTGATGGCATCATTCTCTCTCGT
GGAAATTTAGGGATAGATCTACCACCTGAGAAGGTGTTCCTATTTCAAAAGGCAGCTGTT
CACAGGTGCAATATGGCTGGTAAACCTGCTGTGGTCACTCGTGTTGTGGACAGTATGACT
GATAACTTGCGACCCACTCGTGCTGAGGCAACAGATGTTGCCAACGCTGTATTGGATGGT
ACTGATGCAATTCTTCTAGGTGCAGAGACCCTGAGAGGCCTATATCCTGTTGAGACTATT
TCCACTGTTGGTAAAATATGTGCAGAGGCAGAAAAGGTTTATAATCAAGATGTCTATTTT
AAGAGGGCTGTTAAGTGTGTGGGAGAACCAATGAGTCACTTGGAATCTATTGCTTCCTCT
GCGGTACGTGCTGCCATTAAGGTCAAGGCATCTGTTATTATCTGCTTCACTTCTTCAGGG
AGAGCTGCGAGATTGATAGCTAAGTATAGGCCACCGATGCCAGTTTTGTCTGTTGTCATT
CCTCGTCTCAAGACAAACCAACTCCGCTGGACATTCAGTGGTGCATTTCAGGCTAGGCAG
TCTCTTATTGTTAGAGGGATTTTCCCCATCCTTGCAGATCCAAGACATCCGGCTGAGTCC
ACAAATGCAACCGATGAGTCGATATTGAAGGTTGCACTAGACCATGGGAAAACAGCTGGT
GTTATAATGCCGCATGACCGAGTTGTTGTTTTCCAGAAAGTTGGTGACTCATCTGTGGTG
AAGATCATTGAGCTTGAAAATTAG