Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400070258
CDS Infomation

pacid=37466553 polypeptide=PGSC0003DMP400047497 locus=PGSC0003DMG400027319 ID=PGSC0003DMT400070258.v4.03 annot-version=v4.03
Sequence

ATGGTTGCTGAATCTTGGTTTCGTAATTTCTGGAAAAATTCGAAAAAACATGAGGGTGGT
GGTCATCAAAAGGTGCTAGTTGGTGTTCTAGCATTTGAAGTTGCAAGTTTGATGTCTAAG
CTGGTTCATGTATGGCAGTCTCTAAGTGATAAACAAGTGGCTAGATTGAGGGATGAGATA
ATGAACTCGGTCGGTATAAAGAAGCTTATTTCAGATGATGATTCGTATATTGCAAGATTG
ATATGTACTGAGTTGGTTGAGAACTTGGGACATGTAGCAATTGCTGTTTCTAGGCTTGCA
AAGAAATGTAATGATCCGTTCTTGAAGAGTTTTGAGCAAGCCTTCAATGATTTGCTAAAA
GATGGTGCTGATCCATACGGGTGGCAACTATCATGGAGGAAGATGGACAAAAAAATCAAG
AAGATGGAACGGTTTATTGTGATTAACGCGAATTTGTATCAAGAAATGGAGAATCTTTCT
GATCTTGAACAGACATTGAGGAGATTGAAGGGAAATGATGATGCAGATAGCATTACTTTG
GTTGAATACGAGAAGAAGCTTGCGTGGAAGAAGCAGGAGGTGAAGCACCTTAAGGATGTC
TCTATTTGGAATAGAACTTATGATTATATTGTCCGTCTTTTGGCGAGATCCTTGTTTTCT
ATATTTAGTAGGATAGGGCATGTGTTTGGAGTTGATCCGGTCGTGGATGAGAGGGCTAAA
GCATCCAGAGATCTAGATTCTGATCAAATCCATCGGAGCCACTCAGTTGCTTATGCTCAG
TCATCTGTTCACCCATCTGAAAGTAGTCTGTCTAGATTTTCCTCGGAACCAGTAGAAAGC
ATCCTTGCCAAATCTGGACCAATTTCGAGCACAAGGAACATTCACAATTCTTATTCCGGT
CCCTTGAAAAGTTCAACATCAACAGCAAGCCCGATTCCTGGAAGGCATTCTTCTGCTGGT
TTCTATTCGGGTCCTCTGGGGAGGTCGACAACAAAGTCTGGTCCTCTCCCTCTATTTAAT
AAATCCGGCATGAAGTGGTGGAAATCCCGTGATCGTTCAGGTACCCTAAATGGAAAAGGC
TCAAATTCGAAACATGCTCGACCGACCTCTGGCCCGCTTAAAGGCTGCATGATGGTTGGG
AATGGTTCTCCTGCAAGTAATTGCCATCTAGATCCACATGGATTTCATTCCGGTTTTCTC
AATGCAATGAAAGGAGCTGGTGTAGATGGACTTGCTGATGGCTATTCAACTTGCTCTTAT
CTAACAAGTTATAATGCGAAAAAAAGGCTGCTAAACGCTCCTCCAGAAACTCTCGGGGCT
GCTGCCTTAGCACTGCATTATGCAAATGTCATTATCGTGACTGAGAAACTAGTGGCATCT
CCTCACTTGATCGGGCATGATGCAAGAGAAGACCTGTACAACATGCTACCGGCTAGTTTA
AGAGCAGCCCTCAGGGCAAAATTAAAGCCATTTGCTAAGAGCTTGACATCATCCGTTTAT
GACACAGTTCTTGCTGGAGAATGGAATGAAGCAATGCTGGGGATACTAGAATGGCTTGCT
CCTCTTGCTCATAACATGATAAGATGGCAGTCTGAGCGGAGTTTCGAGCATCAGAACTTC
GTTTCTAGAACAAATGTTCTGCTTGTCCAAACCCTTTATTATGCAAATCAAGAAAAGACA
GAATCAGCAATCACAGAGCTGCTCGTCGGTTTGAACTACGTATGGAGGTATGGCAGGGAA
GTGAATGCAAAAGCAATAGAGGAATGTGCTAGTGCTAGAATGATGTTTAATGATGATTAC
TTGGATGACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400047497
PEP Infomation

pacid=37466553 transcript=PGSC0003DMT400070258 locus=PGSC0003DMG400027319 ID=PGSC0003DMT400070258.v4.03 annot-version=v4.03
Sequence

MVAESWFRNFWKNSKKHEGGGHQKVLVGVLAFEVASLMSKLVHVWQSLSDKQVARLRDEI
MNSVGIKKLISDDDSYIARLICTELVENLGHVAIAVSRLAKKCNDPFLKSFEQAFNDLLK
DGADPYGWQLSWRKMDKKIKKMERFIVINANLYQEMENLSDLEQTLRRLKGNDDADSITL
VEYEKKLAWKKQEVKHLKDVSIWNRTYDYIVRLLARSLFSIFSRIGHVFGVDPVVDERAK
ASRDLDSDQIHRSHSVAYAQSSVHPSESSLSRFSSEPVESILAKSGPISSTRNIHNSYSG
PLKSSTSTASPIPGRHSSAGFYSGPLGRSTTKSGPLPLFNKSGMKWWKSRDRSGTLNGKG
SNSKHARPTSGPLKGCMMVGNGSPASNCHLDPHGFHSGFLNAMKGAGVDGLADGYSTCSY
LTSYNAKKRLLNAPPETLGAAALALHYANVIIVTEKLVASPHLIGHDAREDLYNMLPASL
RAALRAKLKPFAKSLTSSVYDTVLAGEWNEAMLGILEWLAPLAHNMIRWQSERSFEHQNF
VSRTNVLLVQTLYYANQEKTESAITELLVGLNYVWRYGREVNAKAIEECASARMMFNDDY
LDD*

Transcript Sequence

Transcript ID

PGSC0003DMT400070258
Transcript Infomation

pacid=37466553 locus=PGSC0003DMG400027319 ID=PGSC0003DMT400070258.v4.03 annot-version=v4.03
Sequence

ATGGTTGCTGAATCTTGGTTTCGTAATTTCTGGAAAAATTCGAAAAAACATGAGGGTGGT
GGTCATCAAAAGGTGCTAGTTGGTGTTCTAGCATTTGAAGTTGCAAGTTTGATGTCTAAG
CTGGTTCATGTATGGCAGTCTCTAAGTGATAAACAAGTGGCTAGATTGAGGGATGAGATA
ATGAACTCGGTCGGTATAAAGAAGCTTATTTCAGATGATGATTCGTATATTGCAAGATTG
ATATGTACTGAGTTGGTTGAGAACTTGGGACATGTAGCAATTGCTGTTTCTAGGCTTGCA
AAGAAATGTAATGATCCGTTCTTGAAGAGTTTTGAGCAAGCCTTCAATGATTTGCTAAAA
GATGGTGCTGATCCATACGGGTGGCAACTATCATGGAGGAAGATGGACAAAAAAATCAAG
AAGATGGAACGGTTTATTGTGATTAACGCGAATTTGTATCAAGAAATGGAGAATCTTTCT
GATCTTGAACAGACATTGAGGAGATTGAAGGGAAATGATGATGCAGATAGCATTACTTTG
GTTGAATACGAGAAGAAGCTTGCGTGGAAGAAGCAGGAGGTGAAGCACCTTAAGGATGTC
TCTATTTGGAATAGAACTTATGATTATATTGTCCGTCTTTTGGCGAGATCCTTGTTTTCT
ATATTTAGTAGGATAGGGCATGTGTTTGGAGTTGATCCGGTCGTGGATGAGAGGGCTAAA
GCATCCAGAGATCTAGATTCTGATCAAATCCATCGGAGCCACTCAGTTGCTTATGCTCAG
TCATCTGTTCACCCATCTGAAAGTAGTCTGTCTAGATTTTCCTCGGAACCAGTAGAAAGC
ATCCTTGCCAAATCTGGACCAATTTCGAGCACAAGGAACATTCACAATTCTTATTCCGGT
CCCTTGAAAAGTTCAACATCAACAGCAAGCCCGATTCCTGGAAGGCATTCTTCTGCTGGT
TTCTATTCGGGTCCTCTGGGGAGGTCGACAACAAAGTCTGGTCCTCTCCCTCTATTTAAT
AAATCCGGCATGAAGTGGTGGAAATCCCGTGATCGTTCAGGTACCCTAAATGGAAAAGGC
TCAAATTCGAAACATGCTCGACCGACCTCTGGCCCGCTTAAAGGCTGCATGATGGTTGGG
AATGGTTCTCCTGCAAGTAATTGCCATCTAGATCCACATGGATTTCATTCCGGTTTTCTC
AATGCAATGAAAGGAGCTGGTGTAGATGGACTTGCTGATGGCTATTCAACTTGCTCTTAT
CTAACAAGTTATAATGCGAAAAAAAGGCTGCTAAACGCTCCTCCAGAAACTCTCGGGGCT
GCTGCCTTAGCACTGCATTATGCAAATGTCATTATCGTGACTGAGAAACTAGTGGCATCT
CCTCACTTGATCGGGCATGATGCAAGAGAAGACCTGTACAACATGCTACCGGCTAGTTTA
AGAGCAGCCCTCAGGGCAAAATTAAAGCCATTTGCTAAGAGCTTGACATCATCCGTTTAT
GACACAGTTCTTGCTGGAGAATGGAATGAAGCAATGCTGGGGATACTAGAATGGCTTGCT
CCTCTTGCTCATAACATGATAAGATGGCAGTCTGAGCGGAGTTTCGAGCATCAGAACTTC
GTTTCTAGAACAAATGTTCTGCTTGTCCAAACCCTTTATTATGCAAATCAAGAAAAGACA
GAATCAGCAATCACAGAGCTGCTCGTCGGTTTGAACTACGTATGGAGGTATGGCAGGGAA
GTGAATGCAAAAGCAATAGAGGAATGTGCTAGTGCTAGAATGATGTTTAATGATGATTAC
TTGGATGACTGA