Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400070215
CDS Infomation

pacid=37475331 polypeptide=PGSC0003DMP400047473 locus=PGSC0003DMG400027289 ID=PGSC0003DMT400070215.v4.03 annot-version=v4.03
Sequence

ATGGGATATGTAGTTCAAGATTTTGTCTACTTGCCTAATGCTGAGGCTTATGCTTTCCAT
AGTGTGTCAGCATTCACATTGTTCTTGTTCATATGGGAGAATATGGGAAGGCCTTTTGAT
ATTGATGCAAATTTTCTAAAAGATGTTCCATCACTTGAAGATTGTTTTAGTCCTGAATTT
GAGAAATTCATTAAATTACAACATGATTATATGAAGTTCAATTCAGGGAGGATTTACAAC
ACATGTAGAGTTATAGAAGGTCCTTTTCTTGATTTGTTGTCAAAGGAACAAATAAGTAAT
AACAAGAAGCAATGGGCCCTTGGACCATTCAATCCTGTTTTAGTACAACAATATGGGACC
AAAAGTTGCCACAAGCAACATGAATGTCTAATTTGGCTCGATGAACATGAGCCAAACTCG
GTTGTATTCGTGTCATTTGGGACCACGACTTCATTTTCTGACGAACAAATCAAGGAGATT
GCAATTGGATTGGAGAGGAGCGAGGTGAAGTTCGTTTGGGTGTTGAGGGACGCGGATAAA
GGGAATGTTTTCGCGAAGGATCATCAATCAAGAAAGATTGAATTGCCAAAAGGGTTCGAG
GAGAGAGTTAAAGATAAGGGGATTGTGTTGAGAGATTGGGCACCTCAGTTGGAAATCTTG
GCACATTCTTCTGTTGGTGGTTTCATGAGTCATTGTGGATGGAATTCGTGCATGGAGAGC
ATTTCCATGGGGGTGCCAATAGCCGCGTGGCCAATGCATTCGGATCAACCCCGAAACACC
GTATTGGTCACGAAGATTTTGAAAGTTGGCTTAGTCGTTAAGGAGTGGACACGTAGGCAC
GAGGTGGTGACACGTGGCATGGTGCAAGCAGCAGTTGAAAAATTAATGGCGTCTAAAGAA
GGAGAAGAAATGAGGAATAGAGCAATGGATTTGAGTGGAGCTCTTAAGAATTCAGTAGCA
GAAAGTGGCATTAAGAATATGGAGTTGGATTCATTCATTTCTCACATAACAAGGCAAACT
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400047473
PEP Infomation

pacid=37475331 transcript=PGSC0003DMT400070215 locus=PGSC0003DMG400027289 ID=PGSC0003DMT400070215.v4.03 annot-version=v4.03
Sequence

MGYVVQDFVYLPNAEAYAFHSVSAFTLFLFIWENMGRPFDIDANFLKDVPSLEDCFSPEF
EKFIKLQHDYMKFNSGRIYNTCRVIEGPFLDLLSKEQISNNKKQWALGPFNPVLVQQYGT
KSCHKQHECLIWLDEHEPNSVVFVSFGTTTSFSDEQIKEIAIGLERSEVKFVWVLRDADK
GNVFAKDHQSRKIELPKGFEERVKDKGIVLRDWAPQLEILAHSSVGGFMSHCGWNSCMES
ISMGVPIAAWPMHSDQPRNTVLVTKILKVGLVVKEWTRRHEVVTRGMVQAAVEKLMASKE
GEEMRNRAMDLSGALKNSVAESGIKNMELDSFISHITRQT*

Transcript Sequence

Transcript ID

PGSC0003DMT400070215
Transcript Infomation

pacid=37475331 locus=PGSC0003DMG400027289 ID=PGSC0003DMT400070215.v4.03 annot-version=v4.03
Sequence

ATGGGATATGTAGTTCAAGATTTTGTCTACTTGCCTAATGCTGAGGCTTATGCTTTCCAT
AGTGTGTCAGCATTCACATTGTTCTTGTTCATATGGGAGAATATGGGAAGGCCTTTTGAT
ATTGATGCAAATTTTCTAAAAGATGTTCCATCACTTGAAGATTGTTTTAGTCCTGAATTT
GAGAAATTCATTAAATTACAACATGATTATATGAAGTTCAATTCAGGGAGGATTTACAAC
ACATGTAGAGTTATAGAAGGTCCTTTTCTTGATTTGTTGTCAAAGGAACAAATAAGTAAT
AACAAGAAGCAATGGGCCCTTGGACCATTCAATCCTGTTTTAGTACAACAATATGGGACC
AAAAGTTGCCACAAGCAACATGAATGTCTAATTTGGCTCGATGAACATGAGCCAAACTCG
GTTGTATTCGTGTCATTTGGGACCACGACTTCATTTTCTGACGAACAAATCAAGGAGATT
GCAATTGGATTGGAGAGGAGCGAGGTGAAGTTCGTTTGGGTGTTGAGGGACGCGGATAAA
GGGAATGTTTTCGCGAAGGATCATCAATCAAGAAAGATTGAATTGCCAAAAGGGTTCGAG
GAGAGAGTTAAAGATAAGGGGATTGTGTTGAGAGATTGGGCACCTCAGTTGGAAATCTTG
GCACATTCTTCTGTTGGTGGTTTCATGAGTCATTGTGGATGGAATTCGTGCATGGAGAGC
ATTTCCATGGGGGTGCCAATAGCCGCGTGGCCAATGCATTCGGATCAACCCCGAAACACC
GTATTGGTCACGAAGATTTTGAAAGTTGGCTTAGTCGTTAAGGAGTGGACACGTAGGCAC
GAGGTGGTGACACGTGGCATGGTGCAAGCAGCAGTTGAAAAATTAATGGCGTCTAAAGAA
GGAGAAGAAATGAGGAATAGAGCAATGGATTTGAGTGGAGCTCTTAAGAATTCAGTAGCA
GAAAGTGGCATTAAGAATATGGAGTTGGATTCATTCATTTCTCACATAACAAGGCAAACT
TGA