Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400070176
CDS Infomation

pacid=37473062 polypeptide=PGSC0003DMP400047446 locus=PGSC0003DMG400027276 ID=PGSC0003DMT400070176.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTTTGGTTTCTTCACCATTTACATTGCCAAACTCAAAAGTAGAACACCTTTCA
TCAATTTCTCAAAAGCATTACTTTCTTCACTCTTTTCTTCCCAAGAAAACAAACCCCACC
TTCTCAAAATCACCCAAAAAGTTCCAATGTAATGCTATTGGAAATGGCTTGTTTACACAA
ACAACTCAAGAAGTTAGGAGGATTGTACCAGAAAACCTTAAAGGTCTTACTACTGTGAAA
ATAGTGTATGTGGTGTTGGAAGCTCAGTACCAATCAGCTCTTACTGCTGCTGTTCAGACA
CTGAACAAGAATGGTGAGTTTGCTTCTTTTGAGGTTGTGGGGTATTTGGTTGAGGAGCTT
AGAGATGAAAATGCTTATAAAACTTTCTGTAAAGATCTTGAGGATGCAAATATATTTATT
GGGTCATTGATTTTTGTGGAAGAATTGGCTTTAAAGGTTAAGTCTGCAGTGGAGAAAGAA
AGGGATAGGCTTAATGCTGTTCTTGTGTTTCCATCAATGCCTGAAGTGATGAGGCTGAAC
AAGTTGGGATCTTTTAGTATGTCTCAGTTGGGGCAATCAAAAAGTCCATTTTTTCAGCTT
TTCAAGAAGAAGAAATCTTCTGCTGGTTTTTCTGATCAGATGTTGAAGCTTGTGAGGACA
TTGCCTAAGGTCTTGAAGTACTTGCCAAGTGACAAGGCTCAAGATGCTAGGTTGTATATA
CTAAGTTTGCAGTTTTGGCTTGGAGGTTCACCTGATAATTTGGTGAATTTCTTGAAAATG
GTGTCTGGTTCTTATGTTCCTGCATTAAAAGGGGTGAAAATGGACTATTCGGATCCGGTT
TTGTACTTGGATAGTGGAATTTGGCATCCTTTGGCTCCTTGTATGTATGATGATGTGAAG
GAGTATTTGAATTGGTATGCAACAAGGAGGGATGCTAATGAGAAACTCAAGAGTTCTAAT
GCTCCTGTTATTGGGCTTGTTTTGCAAAGGAGTCATATTGTTACTGGTGATGAAAGTCAC
TATGTGGCTGTGATCATGGAATTAGAGGCAAGAGGGGCTAAAGTTATCCCAATTTTCGCC
GGGGGGCTAGACTTTTCCGGGCCAGTTGAGAGATACTTCATTGATCCCATCACAAAGAAG
CCTTTTGTGAATTCAGTAGTATCACTTACTGGTTTTGCTCTTGTTGGAGGGCCAGCAAGA
CAGGATCATCCAAGGGCTATCGAGGCGTTGATGAAGCTTGATGTGCCTTACATTGTGGCA
TTGCCTTTGGTCTTCCAGACAACAGAAGAATGGTTGAACAGCACTTTGGGGTTGCACCCA
ATTCAGGTGGCTCTACAAGTTGCTCTACCTGAGCTCGATGGAGGCATGGAGCCTATCGTA
TTCTCTGGACGGGATCCAAGAACAGGGAAATCACATGCTCTTCACAAAAGAGTGGAGCAG
CTATGCACCAGGGCAATCAAATGGGGAGATTTAAAGAGAAAATCAAAGGCTGAGAAGAAG
TTGGCAATCACTGTTTTCAGCTTTCCCCCGGACAAAGGCAACGTCGGAACTGCTGCATAC
TTGAATGTCTTTGCCTCCATATACTCTGTGCTCAAAGATCTCAAGAAAGACGGGTACAAC
GTTGAGGGGCTGCCTGAGACTTCTGCTGAACTGATTGAAGAAGTAATTCATGACAAAGAA
GCTCAGTTCAGCAGTCCAAATCTTAACGTAGCTTACAAGATGAACGTCCGAGAATACCAG
AAGCTAACCCCCTATGCCACTGCTCTTGAAGAGAACTGGGGGAAAGCACCTGGTAATCTG
AACTCTGATGGAGAGAACCTCTTGGTATATGGAAAACAGTACGGAAATGTATTTATTGGT
GTTCAGCCTACATTTGGATACGAAGGTGACCCGATGAGACTTCTGTTCTCCAAATCAGCC
AGCCCTCACCATGGTTTTGCTGCATACTATTCCTTTGTGGAGAAAATTTTCAAAGCTGAT
GCAGTTCTCCACTTTGGTACTCATGGTTCTCTTGAGTTCATGCCAGGAAAACAGGTGGGA
ATGAGCGATGCTTGTTTCCCAGATAGTCTCATTGGAAACATTCCAAATATCTATTACTAT
GCAGCAAACAATCCATCCGAAGCAACCATTGCCAAACGAAGGAGTTATGCGAATACCATT
AGCTACTTGACTCCCCCAGCTGAGAATGCTGGACTCTACAAGGGACTCAAGCAGCTTAGT
GAGCTCATTGCGTCGTACCAATCACTGAAAGACTCAGGCCGTGGCCCTCAGATTGTGAGC
TCTATCATTAGTACTGCTAGACAGTGTAATCTTGACAAGGACGTTGATCTTCCAGATGAA
GGACAGGAAATAGATGCCAAAGAACGTGACCTCGTGGTAGGAAAAGTATATTCTAAGATT
ATGGAGATTGAGTCTCGTCTTCTGCCCTGTGGACTTCACATCATTGGTGAACCTCCAACC
GCCATGGAGGCAGTTGCTACTCTTGTCAACATTGCTGCATTGGACCGTGCTGAAGATGAT
ATTTCTTCCCTTCCTTCTATACTGGCTGCCACAGTTGGAAGAAACATTGAGGAGATCTAT
CGAGGAAATGACAATGGAGTCTTGCGAGATGTGGAGCTGCTTCGTCAAATTACTGAGGCA
TCACGTGGAGCAACATCAGCATTCGTTGAACGTTCAACTAACAGCAAGGGTCAGGTTGTT
GACAATTCTGACAAGCTGACCTCACTCCTTGGTTTTGGTATTAATGAACCATGGATCCAG
TATTTATCAAACACCCAATTCTACAGAGCTGATAGGGAAAAGCTCAGAGTCCTGTTTCAG
TTCTTGGGAGAGTGTCTGAAGCTAATTGTGGCTAATAACGAGGTGGGAAGCTTGAAACAG
GCTCTTGAAGGGAAATATGTTGAACCAGGTCCTGGAGGGGATCCAATCAGAAACCCGAAA
GTTTTGCCTACTGGGAAAAACATCCATGCTTTGGACCCACAGTCTATTCCCACAACAGCA
GCACTGCAGAGCGCCAAAATAGTGGTTGAAAGATTGTTGGAGAGGCAAAAGGTTGACAAC
GGGGGCAAGTACCCGGAGACTGTTGCTCTGGTGCTTTGGGGAACAGATAACATCAAGACT
TATGGAGAGTCGTTGGCACAGGTTATGTGGATGATTGGTGTTAGGCCAGTTGCTGACACA
CTTGGACGCGTTAACCGAGTGGAACCAGTTAGTCTTGAAGAGCTTGGAAGGCCTAGAGTT
GATGTTGTTGTCAACTGCTCCGGGGTGTTCAGGGATCTCTTCATCAATCAGATGAATCTC
CTTGACCGAGGAATCAAGATGGTTGCTGAGCTTGATGAACCGGAAGACCAAAACTTTGTC
AGGAAACATGCACTAGAACAGGCAAAAACACTCGGAATTGATGTTCGTGAAGCAGCTACT
AGGGTCTTCTCAAATGCTTCGGGTTCTTACTCTTCCAACATCAACCTTGCTGTTGAGAAC
TCATCATGGAACGACGAGAAGCAACTTCAAGACATGTACCTGAGCCGGAAGTCATTTGCA
TTTGACTGTGATGCTCCTGGTGTTGGCATGATGGAGAAGAGGAAAGTTTTTGAGATGGCT
CTAAGCACAGCGGATGCCACGTTCCAGAACCTCGATTCATCAGAAATTTCACTCACAGAT
GTTAGTCACTACTTCGATTCAGATCCAACCAACCTTGTTCAGAACCTCAGGAAGGATGGA
AAGAAGCCTAGTGCATACATTGCTGACACCACTACTGCTAATGCTCAGGTACGTACGTTG
TCTGAGACTGTGAGGCTAGATGCAAGGACAAAGTTGTTGAACCCCAAGTGGTATGAAGGC
ATGCTGTCCACTGGCTACGAGGGTGTTCGTGAGATTGAGAAACGATTGACCAACACAGTA
GGGTGGAGTGCAACTTCAGGCCAAGTTGACAATTGGGTGTATGAAGAAGCCAACACAACA
TTCATCAAAGATGAAGAGATGTTGAACAGGCTTATGAACACAAATCCAAATTCTTTCAGG
AAGTTGCTTCAGACATTCTTGGAGGCCAACGGGCGTGGATACTGGGACACTTCTGAAGAG
AACATTGAGAAACTCAAGCAGTTGTACTCAGAAGTCGAAGACAAGATTGAAGGAATCGAT
CGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400047446
PEP Infomation

pacid=37473062 transcript=PGSC0003DMT400070176 locus=PGSC0003DMG400027276 ID=PGSC0003DMT400070176.v4.03 annot-version=v4.03
Sequence

MASLVSSPFTLPNSKVEHLSSISQKHYFLHSFLPKKTNPTFSKSPKKFQCNAIGNGLFTQ
TTQEVRRIVPENLKGLTTVKIVYVVLEAQYQSALTAAVQTLNKNGEFASFEVVGYLVEEL
RDENAYKTFCKDLEDANIFIGSLIFVEELALKVKSAVEKERDRLNAVLVFPSMPEVMRLN
KLGSFSMSQLGQSKSPFFQLFKKKKSSAGFSDQMLKLVRTLPKVLKYLPSDKAQDARLYI
LSLQFWLGGSPDNLVNFLKMVSGSYVPALKGVKMDYSDPVLYLDSGIWHPLAPCMYDDVK
EYLNWYATRRDANEKLKSSNAPVIGLVLQRSHIVTGDESHYVAVIMELEARGAKVIPIFA
GGLDFSGPVERYFIDPITKKPFVNSVVSLTGFALVGGPARQDHPRAIEALMKLDVPYIVA
LPLVFQTTEEWLNSTLGLHPIQVALQVALPELDGGMEPIVFSGRDPRTGKSHALHKRVEQ
LCTRAIKWGDLKRKSKAEKKLAITVFSFPPDKGNVGTAAYLNVFASIYSVLKDLKKDGYN
VEGLPETSAELIEEVIHDKEAQFSSPNLNVAYKMNVREYQKLTPYATALEENWGKAPGNL
NSDGENLLVYGKQYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYSFVEKIFKAD
AVLHFGTHGSLEFMPGKQVGMSDACFPDSLIGNIPNIYYYAANNPSEATIAKRRSYANTI
SYLTPPAENAGLYKGLKQLSELIASYQSLKDSGRGPQIVSSIISTARQCNLDKDVDLPDE
GQEIDAKERDLVVGKVYSKIMEIESRLLPCGLHIIGEPPTAMEAVATLVNIAALDRAEDD
ISSLPSILAATVGRNIEEIYRGNDNGVLRDVELLRQITEASRGATSAFVERSTNSKGQVV
DNSDKLTSLLGFGINEPWIQYLSNTQFYRADREKLRVLFQFLGECLKLIVANNEVGSLKQ
ALEGKYVEPGPGGDPIRNPKVLPTGKNIHALDPQSIPTTAALQSAKIVVERLLERQKVDN
GGKYPETVALVLWGTDNIKTYGESLAQVMWMIGVRPVADTLGRVNRVEPVSLEELGRPRV
DVVVNCSGVFRDLFINQMNLLDRGIKMVAELDEPEDQNFVRKHALEQAKTLGIDVREAAT
RVFSNASGSYSSNINLAVENSSWNDEKQLQDMYLSRKSFAFDCDAPGVGMMEKRKVFEMA
LSTADATFQNLDSSEISLTDVSHYFDSDPTNLVQNLRKDGKKPSAYIADTTTANAQVRTL
SETVRLDARTKLLNPKWYEGMLSTGYEGVREIEKRLTNTVGWSATSGQVDNWVYEEANTT
FIKDEEMLNRLMNTNPNSFRKLLQTFLEANGRGYWDTSEENIEKLKQLYSEVEDKIEGID
R*

Transcript Sequence

Transcript ID

PGSC0003DMT400070176
Transcript Infomation

pacid=37473062 locus=PGSC0003DMG400027276 ID=PGSC0003DMT400070176.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTTTGGTTTCTTCACCATTTACATTGCCAAACTCAAAAGTAGAACACCTTTCA
TCAATTTCTCAAAAGCATTACTTTCTTCACTCTTTTCTTCCCAAGAAAACAAACCCCACC
TTCTCAAAATCACCCAAAAAGTTCCAATGTAATGCTATTGGAAATGGCTTGTTTACACAA
ACAACTCAAGAAGTTAGGAGGATTGTACCAGAAAACCTTAAAGGTCTTACTACTGTGAAA
ATAGTGTATGTGGTGTTGGAAGCTCAGTACCAATCAGCTCTTACTGCTGCTGTTCAGACA
CTGAACAAGAATGGTGAGTTTGCTTCTTTTGAGGTTGTGGGGTATTTGGTTGAGGAGCTT
AGAGATGAAAATGCTTATAAAACTTTCTGTAAAGATCTTGAGGATGCAAATATATTTATT
GGGTCATTGATTTTTGTGGAAGAATTGGCTTTAAAGGTTAAGTCTGCAGTGGAGAAAGAA
AGGGATAGGCTTAATGCTGTTCTTGTGTTTCCATCAATGCCTGAAGTGATGAGGCTGAAC
AAGTTGGGATCTTTTAGTATGTCTCAGTTGGGGCAATCAAAAAGTCCATTTTTTCAGCTT
TTCAAGAAGAAGAAATCTTCTGCTGGTTTTTCTGATCAGATGTTGAAGCTTGTGAGGACA
TTGCCTAAGGTCTTGAAGTACTTGCCAAGTGACAAGGCTCAAGATGCTAGGTTGTATATA
CTAAGTTTGCAGTTTTGGCTTGGAGGTTCACCTGATAATTTGGTGAATTTCTTGAAAATG
GTGTCTGGTTCTTATGTTCCTGCATTAAAAGGGGTGAAAATGGACTATTCGGATCCGGTT
TTGTACTTGGATAGTGGAATTTGGCATCCTTTGGCTCCTTGTATGTATGATGATGTGAAG
GAGTATTTGAATTGGTATGCAACAAGGAGGGATGCTAATGAGAAACTCAAGAGTTCTAAT
GCTCCTGTTATTGGGCTTGTTTTGCAAAGGAGTCATATTGTTACTGGTGATGAAAGTCAC
TATGTGGCTGTGATCATGGAATTAGAGGCAAGAGGGGCTAAAGTTATCCCAATTTTCGCC
GGGGGGCTAGACTTTTCCGGGCCAGTTGAGAGATACTTCATTGATCCCATCACAAAGAAG
CCTTTTGTGAATTCAGTAGTATCACTTACTGGTTTTGCTCTTGTTGGAGGGCCAGCAAGA
CAGGATCATCCAAGGGCTATCGAGGCGTTGATGAAGCTTGATGTGCCTTACATTGTGGCA
TTGCCTTTGGTCTTCCAGACAACAGAAGAATGGTTGAACAGCACTTTGGGGTTGCACCCA
ATTCAGGTGGCTCTACAAGTTGCTCTACCTGAGCTCGATGGAGGCATGGAGCCTATCGTA
TTCTCTGGACGGGATCCAAGAACAGGGAAATCACATGCTCTTCACAAAAGAGTGGAGCAG
CTATGCACCAGGGCAATCAAATGGGGAGATTTAAAGAGAAAATCAAAGGCTGAGAAGAAG
TTGGCAATCACTGTTTTCAGCTTTCCCCCGGACAAAGGCAACGTCGGAACTGCTGCATAC
TTGAATGTCTTTGCCTCCATATACTCTGTGCTCAAAGATCTCAAGAAAGACGGGTACAAC
GTTGAGGGGCTGCCTGAGACTTCTGCTGAACTGATTGAAGAAGTAATTCATGACAAAGAA
GCTCAGTTCAGCAGTCCAAATCTTAACGTAGCTTACAAGATGAACGTCCGAGAATACCAG
AAGCTAACCCCCTATGCCACTGCTCTTGAAGAGAACTGGGGGAAAGCACCTGGTAATCTG
AACTCTGATGGAGAGAACCTCTTGGTATATGGAAAACAGTACGGAAATGTATTTATTGGT
GTTCAGCCTACATTTGGATACGAAGGTGACCCGATGAGACTTCTGTTCTCCAAATCAGCC
AGCCCTCACCATGGTTTTGCTGCATACTATTCCTTTGTGGAGAAAATTTTCAAAGCTGAT
GCAGTTCTCCACTTTGGTACTCATGGTTCTCTTGAGTTCATGCCAGGAAAACAGGTGGGA
ATGAGCGATGCTTGTTTCCCAGATAGTCTCATTGGAAACATTCCAAATATCTATTACTAT
GCAGCAAACAATCCATCCGAAGCAACCATTGCCAAACGAAGGAGTTATGCGAATACCATT
AGCTACTTGACTCCCCCAGCTGAGAATGCTGGACTCTACAAGGGACTCAAGCAGCTTAGT
GAGCTCATTGCGTCGTACCAATCACTGAAAGACTCAGGCCGTGGCCCTCAGATTGTGAGC
TCTATCATTAGTACTGCTAGACAGTGTAATCTTGACAAGGACGTTGATCTTCCAGATGAA
GGACAGGAAATAGATGCCAAAGAACGTGACCTCGTGGTAGGAAAAGTATATTCTAAGATT
ATGGAGATTGAGTCTCGTCTTCTGCCCTGTGGACTTCACATCATTGGTGAACCTCCAACC
GCCATGGAGGCAGTTGCTACTCTTGTCAACATTGCTGCATTGGACCGTGCTGAAGATGAT
ATTTCTTCCCTTCCTTCTATACTGGCTGCCACAGTTGGAAGAAACATTGAGGAGATCTAT
CGAGGAAATGACAATGGAGTCTTGCGAGATGTGGAGCTGCTTCGTCAAATTACTGAGGCA
TCACGTGGAGCAACATCAGCATTCGTTGAACGTTCAACTAACAGCAAGGGTCAGGTTGTT
GACAATTCTGACAAGCTGACCTCACTCCTTGGTTTTGGTATTAATGAACCATGGATCCAG
TATTTATCAAACACCCAATTCTACAGAGCTGATAGGGAAAAGCTCAGAGTCCTGTTTCAG
TTCTTGGGAGAGTGTCTGAAGCTAATTGTGGCTAATAACGAGGTGGGAAGCTTGAAACAG
GCTCTTGAAGGGAAATATGTTGAACCAGGTCCTGGAGGGGATCCAATCAGAAACCCGAAA
GTTTTGCCTACTGGGAAAAACATCCATGCTTTGGACCCACAGTCTATTCCCACAACAGCA
GCACTGCAGAGCGCCAAAATAGTGGTTGAAAGATTGTTGGAGAGGCAAAAGGTTGACAAC
GGGGGCAAGTACCCGGAGACTGTTGCTCTGGTGCTTTGGGGAACAGATAACATCAAGACT
TATGGAGAGTCGTTGGCACAGGTTATGTGGATGATTGGTGTTAGGCCAGTTGCTGACACA
CTTGGACGCGTTAACCGAGTGGAACCAGTTAGTCTTGAAGAGCTTGGAAGGCCTAGAGTT
GATGTTGTTGTCAACTGCTCCGGGGTGTTCAGGGATCTCTTCATCAATCAGATGAATCTC
CTTGACCGAGGAATCAAGATGGTTGCTGAGCTTGATGAACCGGAAGACCAAAACTTTGTC
AGGAAACATGCACTAGAACAGGCAAAAACACTCGGAATTGATGTTCGTGAAGCAGCTACT
AGGGTCTTCTCAAATGCTTCGGGTTCTTACTCTTCCAACATCAACCTTGCTGTTGAGAAC
TCATCATGGAACGACGAGAAGCAACTTCAAGACATGTACCTGAGCCGGAAGTCATTTGCA
TTTGACTGTGATGCTCCTGGTGTTGGCATGATGGAGAAGAGGAAAGTTTTTGAGATGGCT
CTAAGCACAGCGGATGCCACGTTCCAGAACCTCGATTCATCAGAAATTTCACTCACAGAT
GTTAGTCACTACTTCGATTCAGATCCAACCAACCTTGTTCAGAACCTCAGGAAGGATGGA
AAGAAGCCTAGTGCATACATTGCTGACACCACTACTGCTAATGCTCAGGTACGTACGTTG
TCTGAGACTGTGAGGCTAGATGCAAGGACAAAGTTGTTGAACCCCAAGTGGTATGAAGGC
ATGCTGTCCACTGGCTACGAGGGTGTTCGTGAGATTGAGAAACGATTGACCAACACAGTA
GGGTGGAGTGCAACTTCAGGCCAAGTTGACAATTGGGTGTATGAAGAAGCCAACACAACA
TTCATCAAAGATGAAGAGATGTTGAACAGGCTTATGAACACAAATCCAAATTCTTTCAGG
AAGTTGCTTCAGACATTCTTGGAGGCCAACGGGCGTGGATACTGGGACACTTCTGAAGAG
AACATTGAGAAACTCAAGCAGTTGTACTCAGAAGTCGAAGACAAGATTGAAGGAATCGAT
CGATAA