Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400070154
CDS Infomation

pacid=37474386 polypeptide=PGSC0003DMP400047430 locus=PGSC0003DMG400027268 ID=PGSC0003DMT400070154.v4.03 annot-version=v4.03
Sequence

ATGGCGACTGCCAATTTTTGCCGCCCCAAATTCATTCATCATTATCATCATCAGCACCAG
AATTGCTTTAACCTTCCTACGAATCTCTACTTCAGTAACCACTTGAAAAGCAAACGCAGC
GATGGAGCTCAGTCCGTACGACGGCGGCGGCAGCGGTGGCGTAGTAGCTTGCGTGTGCAT
TGCCAAGCAGCTGCAACTGACATCGAGGCTACAGCTCGCGCCGGCAAAGACCGTCTGTTG
AAGGTACCGATATCGAATATAAGGAATTTCTCAATAATAGCACATATTGATCATGGGAAA
TCGACGTTGGCAGATAAGTTGCTGCAAATGACGGGAACCGTAGAGAGCCGAGACATGAAG
GAGCAGTTTCTAGATAATATGGATTTGGAGAGAGAGAGAGGCATCACTATCAAATTGCAG
GCTGCTCGAATGCGTTTCATTTATGAAAATGAACCATATTGCCTTAATCTGATTGACACT
CCAGGTCATGTAGATTTCTCGTATGAGGTGTCTCGGTCTCTTGCTGCCTGTGAAGGTGCA
CTGCTTGTAGTTGATGCATCCCAGGGAGTAGAGGCGCAAACCCTGGCTAATGTGTATTTA
GCATTGGAAAACAATCTTGAGATCATCCCGGTTTTGAACAAGATTGATCTTCCAGGAGCT
GATCCTGCTCGTGTTTGTCAAGAGATAGAAGAGATTGTTGGCCTGGATTGTAGCAATGCC
ATATACACCTCAGCAAAGGAAGGAATAGGTATTACTGAAATTCTAAATGCGATTGTTCAG
AGGATTCCACCTCCACGTGATACTGCTGAAAGGCCTCTGAGGGCTCTTATATTTGACAGT
TACTATGATCCATATCGGGGAGTTATTGTCTATTTTCGAATCATTGATGGGACTATTAAG
AAAGGTGACAGAGTGCTTTTTATGGCCAGTGGGAAGGATTATTATGCTGATGAATTAGGA
GTTTTATCGCCCAACCAGTTGCAAGTTGATCAATTATACGCTGGAGAGGTGGGCTTTCTT
TCAGCTTCCATAAGATCCGTAGCTGATGCTAGGGTGGGTGACACTATAACACACTTCCAA
AGAAAAGCAGAACAATCACTACCGGGATACAAGGAGGCTACTCCAATGGTTTTTTGTGGC
TTGTTCCCTGTTGATGCCGACCAGTTTAGTGAGCTTCGCGATGCGTTGGAGAAATTGCAA
CTTAATGATGCTGCATTAAAGTTTGAGCCAGAGACTTCAAGTGCTATGGGTTTTGGATTT
CGATGTGGGTTTTTGGGTCTTCTTCACATGGAAATTGTTCAGGAAAGGCTCGAGCGCGAG
TACAATTTGTCTCTAATAACTACAGCCCCAAGTGTCGTTTACCGAGTCAATTGCATAGAT
GGTGATACCGTTGAGTGTTCAAATCCATCTTTGCTTCCTGAACCTGGAAATAGACGGTCA
ATTGAAGAGCCATTTGTTAAGATTGAGCTGCTCACTCCAAAAGAATATATTGGTGCTCTT
ATGGAACTTGCTCAAGATCGACGAGGAATATTCAAAGAGATGAAATATATTACCGAGAAT
AGAGCATCAATCATATATGAATTGCCACTTGCTGAGATGGTTGGAGATTTCTTTGATCAG
CTAAAGTCAAGAAGCAAAGGTTATGCAAGCATGGAATACAACTTCATTGGGTATACAGAA
AGTGATTTGATAAAGCTTGATATTCTTATTAATGGTGATCGTGTCGAACCCTTGGCAACA
ATCGTACATAAAGACAAGGCATATTCTGTGGGAAGGGCTTTAACCCAAAAGCTAAAAGAA
CTAATACCCAGACAAATGTTTAAAGTACCAATCCAGGCAACCATTGGCTCAAAAGTTATT
GCCAGCGAGGCTATATCTGCTATCAGGAAGGATGTTCTCGCCAAGTGCTATGGTGGTGAC
ATCTCGAGAAAAAAGAAACTGCTCAAGAAACAGGCTGAAGGAAAGAAAAGGATGAAAGCC
ATTGGTAAAGTTGATGTACCACAGGAAGCATTCATGGCTGTATTAAAACTTGAAAAAGAG
GTCTTATAA

Peptide Sequence

PEP ID

PGSC0003DMP400047430
PEP Infomation

pacid=37474386 transcript=PGSC0003DMT400070154 locus=PGSC0003DMG400027268 ID=PGSC0003DMT400070154.v4.03 annot-version=v4.03
Sequence

MATANFCRPKFIHHYHHQHQNCFNLPTNLYFSNHLKSKRSDGAQSVRRRRQRWRSSLRVH
CQAAATDIEATARAGKDRLLKVPISNIRNFSIIAHIDHGKSTLADKLLQMTGTVESRDMK
EQFLDNMDLERERGITIKLQAARMRFIYENEPYCLNLIDTPGHVDFSYEVSRSLAACEGA
LLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPARVCQEIEEIVGLDCSNA
IYTSAKEGIGITEILNAIVQRIPPPRDTAERPLRALIFDSYYDPYRGVIVYFRIIDGTIK
KGDRVLFMASGKDYYADELGVLSPNQLQVDQLYAGEVGFLSASIRSVADARVGDTITHFQ
RKAEQSLPGYKEATPMVFCGLFPVDADQFSELRDALEKLQLNDAALKFEPETSSAMGFGF
RCGFLGLLHMEIVQERLEREYNLSLITTAPSVVYRVNCIDGDTVECSNPSLLPEPGNRRS
IEEPFVKIELLTPKEYIGALMELAQDRRGIFKEMKYITENRASIIYELPLAEMVGDFFDQ
LKSRSKGYASMEYNFIGYTESDLIKLDILINGDRVEPLATIVHKDKAYSVGRALTQKLKE
LIPRQMFKVPIQATIGSKVIASEAISAIRKDVLAKCYGGDISRKKKLLKKQAEGKKRMKA
IGKVDVPQEAFMAVLKLEKEVL*

Transcript Sequence

Transcript ID

PGSC0003DMT400070154
Transcript Infomation

pacid=37474386 locus=PGSC0003DMG400027268 ID=PGSC0003DMT400070154.v4.03 annot-version=v4.03
Sequence

ATGGCGACTGCCAATTTTTGCCGCCCCAAATTCATTCATCATTATCATCATCAGCACCAG
AATTGCTTTAACCTTCCTACGAATCTCTACTTCAGTAACCACTTGAAAAGCAAACGCAGC
GATGGAGCTCAGTCCGTACGACGGCGGCGGCAGCGGTGGCGTAGTAGCTTGCGTGTGCAT
TGCCAAGCAGCTGCAACTGACATCGAGGCTACAGCTCGCGCCGGCAAAGACCGTCTGTTG
AAGGTACCGATATCGAATATAAGGAATTTCTCAATAATAGCACATATTGATCATGGGAAA
TCGACGTTGGCAGATAAGTTGCTGCAAATGACGGGAACCGTAGAGAGCCGAGACATGAAG
GAGCAGTTTCTAGATAATATGGATTTGGAGAGAGAGAGAGGCATCACTATCAAATTGCAG
GCTGCTCGAATGCGTTTCATTTATGAAAATGAACCATATTGCCTTAATCTGATTGACACT
CCAGGTCATGTAGATTTCTCGTATGAGGTGTCTCGGTCTCTTGCTGCCTGTGAAGGTGCA
CTGCTTGTAGTTGATGCATCCCAGGGAGTAGAGGCGCAAACCCTGGCTAATGTGTATTTA
GCATTGGAAAACAATCTTGAGATCATCCCGGTTTTGAACAAGATTGATCTTCCAGGAGCT
GATCCTGCTCGTGTTTGTCAAGAGATAGAAGAGATTGTTGGCCTGGATTGTAGCAATGCC
ATATACACCTCAGCAAAGGAAGGAATAGGTATTACTGAAATTCTAAATGCGATTGTTCAG
AGGATTCCACCTCCACGTGATACTGCTGAAAGGCCTCTGAGGGCTCTTATATTTGACAGT
TACTATGATCCATATCGGGGAGTTATTGTCTATTTTCGAATCATTGATGGGACTATTAAG
AAAGGTGACAGAGTGCTTTTTATGGCCAGTGGGAAGGATTATTATGCTGATGAATTAGGA
GTTTTATCGCCCAACCAGTTGCAAGTTGATCAATTATACGCTGGAGAGGTGGGCTTTCTT
TCAGCTTCCATAAGATCCGTAGCTGATGCTAGGGTGGGTGACACTATAACACACTTCCAA
AGAAAAGCAGAACAATCACTACCGGGATACAAGGAGGCTACTCCAATGGTTTTTTGTGGC
TTGTTCCCTGTTGATGCCGACCAGTTTAGTGAGCTTCGCGATGCGTTGGAGAAATTGCAA
CTTAATGATGCTGCATTAAAGTTTGAGCCAGAGACTTCAAGTGCTATGGGTTTTGGATTT
CGATGTGGGTTTTTGGGTCTTCTTCACATGGAAATTGTTCAGGAAAGGCTCGAGCGCGAG
TACAATTTGTCTCTAATAACTACAGCCCCAAGTGTCGTTTACCGAGTCAATTGCATAGAT
GGTGATACCGTTGAGTGTTCAAATCCATCTTTGCTTCCTGAACCTGGAAATAGACGGTCA
ATTGAAGAGCCATTTGTTAAGATTGAGCTGCTCACTCCAAAAGAATATATTGGTGCTCTT
ATGGAACTTGCTCAAGATCGACGAGGAATATTCAAAGAGATGAAATATATTACCGAGAAT
AGAGCATCAATCATATATGAATTGCCACTTGCTGAGATGGTTGGAGATTTCTTTGATCAG
CTAAAGTCAAGAAGCAAAGGTTATGCAAGCATGGAATACAACTTCATTGGGTATACAGAA
AGTGATTTGATAAAGCTTGATATTCTTATTAATGGTGATCGTGTCGAACCCTTGGCAACA
ATCGTACATAAAGACAAGGCATATTCTGTGGGAAGGGCTTTAACCCAAAAGCTAAAAGAA
CTAATACCCAGACAAATGTTTAAAGTACCAATCCAGGCAACCATTGGCTCAAAAGTTATT
GCCAGCGAGGCTATATCTGCTATCAGGAAGGATGTTCTCGCCAAGTGCTATGGTGGTGAC
ATCTCGAGAAAAAAGAAACTGCTCAAGAAACAGGCTGAAGGAAAGAAAAGGATGAAAGCC
ATTGGTAAAGTTGATGTACCACAGGAAGCATTCATGGCTGTATTAAAACTTGAAAAAGAG
GTCTTATAA