Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400070124
CDS Infomation

pacid=37475007 polypeptide=PGSC0003DMP400047406 locus=PGSC0003DMG400027260 ID=PGSC0003DMT400070124.v4.03 annot-version=v4.03
Sequence

ATGATTGATCAGTTCATCAATTTTGTTATTCGTCCGCCCAGGGCAGATTACAATCCAGAC
CAGTTTTTATGGGAGAAAGAGTTCAGTCTTGGGGGAAGAAAGTACAAAAGGGAAGACTTT
GAGCTTAAGAATGAAAGAGGTCATACCTTGCGATGCAGTCATTATACTCCATCATCATTT
CCTGATGGTGCTCCTCTTCCTTGTGTTATATACTGCCATGGAAACAGCGGCTGTAGGGCT
GATGCGAATGAGGCAGCTGTAATACTTCTTTCATCAAACATCACTGTGGTAACCCTTGAC
TTCTCGGGTTCAGGCTTGTCAGATGGCGACTACGTTAGTCTTGGTTGGCATGAGAAAGAT
GACCTCAAGGTAGTTGTGTCATATCTGAGAAGCAACCTGAAAGTTTCACGCATAGGTCTA
TGGGGGCGGTCTATGGGTGCAGTTACAAGCCTTCTATATGGAGCGGAAGATCCTTCTATT
GCTGGAATGGTCTTGGACAGTGCCTTCTCTAACTTATTTGATCTAATGATGGAGCTTGTA
GATGTCTACAAAATCAGGCTTCCTAAATTCACCATAAAGGTTGCTGTGCAGTATATGCGA
CATGTCATTCAGAAGAAGGCAAAGTTTGATATCATGAGACTTAATTGCTTACAGGTTTCT
CCTAAAACATATATTCCTGCTCTCTTTGGACATGCTAAAGATGATAAGTTTGTTCAGCCC
CATCACTCTGATCTCATTTATAAATCATATGCGGGTGATAAAAACATTATCAAGTTTGAT
GGTGACCACAATTCCTCCCGACCACAATTTTATTATGATTCAGTGTCTATTTTCTTCTAC
AATGTCCTCCACCCTCCCGGGATTTCACCAACTAAAAGTAAAATAGAGAAATATTACGAT
TTAGGGGACATCAAGGTCAGTGCTGGAATGGATGAGAACCTCTTGTATGAGATAATTGCA
ACTCTTCGGAATGTTACTTCTGATACAGCAAGCTCTTCATCTGTGCCACCTAGCATTTCA
ACAGCTAAGTCTGCTGGCGAACTCCTTGCTGACATTGCCCCAATTGCTAGTCTAAATGAT
CCATTAATTAATGGAGGAGAAGAACTTAATGGTCATGCTACTCCACAAACAGAGGACAAG
CAAGGTGGCGAAAATGAGGACTGTTACTCTTGCACAAGCTCAAATCGAGAGAGTTGGGGA
AGGTGCTCATCTCTGGGAAGTGATGATGAGATTACCACAGATTTTGTAGATTCTGCCAGT
GGCAATCAGAGTACTGTAGATGTGCTTGCGACCCCTCTTCGCGATAACCAACATACTGCA
CTGGACTCATCAAAGGACGATGGAAAAAAGAAAGCTGCACAAATCACAAAAAAATCTAAG
CGCGAGAAGTTTGAAAAGTTGGAAGCTCTTAGCCAGCGATTACGGCTTTGCTTTCAGAAG
AGAATTAACCATAGGAGATACAGCTCCTCCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400047406
PEP Infomation

pacid=37475007 transcript=PGSC0003DMT400070124 locus=PGSC0003DMG400027260 ID=PGSC0003DMT400070124.v4.03 annot-version=v4.03
Sequence

MIDQFINFVIRPPRADYNPDQFLWEKEFSLGGRKYKREDFELKNERGHTLRCSHYTPSSF
PDGAPLPCVIYCHGNSGCRADANEAAVILLSSNITVVTLDFSGSGLSDGDYVSLGWHEKD
DLKVVVSYLRSNLKVSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSNLFDLMMELV
DVYKIRLPKFTIKVAVQYMRHVIQKKAKFDIMRLNCLQVSPKTYIPALFGHAKDDKFVQP
HHSDLIYKSYAGDKNIIKFDGDHNSSRPQFYYDSVSIFFYNVLHPPGISPTKSKIEKYYD
LGDIKVSAGMDENLLYEIIATLRNVTSDTASSSSVPPSISTAKSAGELLADIAPIASLND
PLINGGEELNGHATPQTEDKQGGENEDCYSCTSSNRESWGRCSSLGSDDEITTDFVDSAS
GNQSTVDVLATPLRDNQHTALDSSKDDGKKKAAQITKKSKREKFEKLEALSQRLRLCFQK
RINHRRYSSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400070124
Transcript Infomation

pacid=37475007 locus=PGSC0003DMG400027260 ID=PGSC0003DMT400070124.v4.03 annot-version=v4.03
Sequence

ATGATTGATCAGTTCATCAATTTTGTTATTCGTCCGCCCAGGGCAGATTACAATCCAGAC
CAGTTTTTATGGGAGAAAGAGTTCAGTCTTGGGGGAAGAAAGTACAAAAGGGAAGACTTT
GAGCTTAAGAATGAAAGAGGTCATACCTTGCGATGCAGTCATTATACTCCATCATCATTT
CCTGATGGTGCTCCTCTTCCTTGTGTTATATACTGCCATGGAAACAGCGGCTGTAGGGCT
GATGCGAATGAGGCAGCTGTAATACTTCTTTCATCAAACATCACTGTGGTAACCCTTGAC
TTCTCGGGTTCAGGCTTGTCAGATGGCGACTACGTTAGTCTTGGTTGGCATGAGAAAGAT
GACCTCAAGGTAGTTGTGTCATATCTGAGAAGCAACCTGAAAGTTTCACGCATAGGTCTA
TGGGGGCGGTCTATGGGTGCAGTTACAAGCCTTCTATATGGAGCGGAAGATCCTTCTATT
GCTGGAATGGTCTTGGACAGTGCCTTCTCTAACTTATTTGATCTAATGATGGAGCTTGTA
GATGTCTACAAAATCAGGCTTCCTAAATTCACCATAAAGGTTGCTGTGCAGTATATGCGA
CATGTCATTCAGAAGAAGGCAAAGTTTGATATCATGAGACTTAATTGCTTACAGGTTTCT
CCTAAAACATATATTCCTGCTCTCTTTGGACATGCTAAAGATGATAAGTTTGTTCAGCCC
CATCACTCTGATCTCATTTATAAATCATATGCGGGTGATAAAAACATTATCAAGTTTGAT
GGTGACCACAATTCCTCCCGACCACAATTTTATTATGATTCAGTGTCTATTTTCTTCTAC
AATGTCCTCCACCCTCCCGGGATTTCACCAACTAAAAGTAAAATAGAGAAATATTACGAT
TTAGGGGACATCAAGGTCAGTGCTGGAATGGATGAGAACCTCTTGTATGAGATAATTGCA
ACTCTTCGGAATGTTACTTCTGATACAGCAAGCTCTTCATCTGTGCCACCTAGCATTTCA
ACAGCTAAGTCTGCTGGCGAACTCCTTGCTGACATTGCCCCAATTGCTAGTCTAAATGAT
CCATTAATTAATGGAGGAGAAGAACTTAATGGTCATGCTACTCCACAAACAGAGGACAAG
CAAGGTGGCGAAAATGAGGACTGTTACTCTTGCACAAGCTCAAATCGAGAGAGTTGGGGA
AGGTGCTCATCTCTGGGAAGTGATGATGAGATTACCACAGATTTTGTAGATTCTGCCAGT
GGCAATCAGAGTACTGTAGATGTGCTTGCGACCCCTCTTCGCGATAACCAACATACTGCA
CTGGACTCATCAAAGGACGATGGAAAAAAGAAAGCTGCACAAATCACAAAAAAATCTAAG
CGCGAGAAGTTTGAAAAGTTGGAAGCTCTTAGCCAGCGATTACGGCTTTGCTTTCAGAAG
AGAATTAACCATAGGAGATACAGCTCCTCCTAA