Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400070040
CDS Infomation

pacid=37474674 polypeptide=PGSC0003DMP400047339 locus=PGSC0003DMG400027239 ID=PGSC0003DMT400070040.v4.03 annot-version=v4.03
Sequence

ATGAAGAAAAATCTTGAAATAATTAGTAGATTTCAAAGATTTAAGAATTTGGAGAAATTA
GATGAAGAAGAAGATCAAGCTAAGGTTATAACAATTAGTGTGGATCGGTTTGGAGCTAAA
GGTGATGGAAAAATAGATGATACAAATGCATTTCAAAAAGCATGGAAAGAAGTTTGTTCG
TCTTCAAATGTTGTGAATTTTGTGGTGTCCAAAAACAAGAAATATCTTCTCAAACCAATC
AAATTTTCTGGGCCATGCAAATCTTCCATTACAATGCAGATTTATGGAACCCTATTAGCA
TCTGATGATACTTCAGATTACAACAAGGATAGTAGGCACTGGCTTATTTTTGATAGTGTT
CAAAAATTGGTTGTTGGAGGAGCTGGAGTTATCAATGGCAATGGCAAAATTTGGTGGCAA
AATTCTTGCAAAATTAATAAAAAATTGCACTGCAAGGTTGCACCCACGGCCCTAACATTT
TACAAGTGCAACAACTTGAAGGTGAAGGACCTTAAAATAGAAAATGCACAACAAATACAT
TTGCTAATTGAGAAATGTGTTGGTGTTGAAGTTTCAAAATTGGTAGTGAGTTCTCCAGAA
AATAGCCCTAACACTGATGGAATCCATATTACTAACACTCAAAATATTCAAATTTCTGAC
TCCACCATTGGCACAGGTGATGATTGCATCTCAATAGTGGATGGATCTCAAAAGGTCCTA
GCCACTGGCATTACTTGTGGACCAGGTCATGGAATAAGTATTGGAAGTTTGGGAGGTGGA
AATTCAGAAGCTCATGTGTCTGATATTCATGTAAATGGAGCTAAGCTTTATGGAACTACG
AATGGACTTAGGATTAAGACTTGGCCGGGAGGATTTGGAAGTGCAAGCAATATTAAGTTT
CAAAATGTGGCTATGAATAATGTCAAAAATCCAATAATTATAGACCAAAATTATTGTGAT
CAAGCTGATGGTCCATGCAAAGCTGAGACCGACTCAGCAATTCAAGTGAAAAATGTGATT
TATCAAAATATCAAAGGCACAAGTGCAACAAATGATGCAATAAATTTCAATTGCAGCAAA
AAAATTCCATGTCAAGGAATTTTGTTGGAGAATGTGAAATTGTTAGGAGGAAATGGTGAA
ACTCCAAATGCTATTTGGGGAAATATTAACAATCTTACATGCAACAATGTTTTACCAGAA
TGTAAAAAAACTCAAAAAATTGTATAA

Peptide Sequence

PEP ID

PGSC0003DMP400047339
PEP Infomation

pacid=37474674 transcript=PGSC0003DMT400070040 locus=PGSC0003DMG400027239 ID=PGSC0003DMT400070040.v4.03 annot-version=v4.03
Sequence

MKKNLEIISRFQRFKNLEKLDEEEDQAKVITISVDRFGAKGDGKIDDTNAFQKAWKEVCS
SSNVVNFVVSKNKKYLLKPIKFSGPCKSSITMQIYGTLLASDDTSDYNKDSRHWLIFDSV
QKLVVGGAGVINGNGKIWWQNSCKINKKLHCKVAPTALTFYKCNNLKVKDLKIENAQQIH
LLIEKCVGVEVSKLVVSSPENSPNTDGIHITNTQNIQISDSTIGTGDDCISIVDGSQKVL
ATGITCGPGHGISIGSLGGGNSEAHVSDIHVNGAKLYGTTNGLRIKTWPGGFGSASNIKF
QNVAMNNVKNPIIIDQNYCDQADGPCKAETDSAIQVKNVIYQNIKGTSATNDAINFNCSK
KIPCQGILLENVKLLGGNGETPNAIWGNINNLTCNNVLPECKKTQKIV*

Transcript Sequence

Transcript ID

PGSC0003DMT400070040
Transcript Infomation

pacid=37474674 locus=PGSC0003DMG400027239 ID=PGSC0003DMT400070040.v4.03 annot-version=v4.03
Sequence

ATGAAGAAAAATCTTGAAATAATTAGTAGATTTCAAAGATTTAAGAATTTGGAGAAATTA
GATGAAGAAGAAGATCAAGCTAAGGTTATAACAATTAGTGTGGATCGGTTTGGAGCTAAA
GGTGATGGAAAAATAGATGATACAAATGCATTTCAAAAAGCATGGAAAGAAGTTTGTTCG
TCTTCAAATGTTGTGAATTTTGTGGTGTCCAAAAACAAGAAATATCTTCTCAAACCAATC
AAATTTTCTGGGCCATGCAAATCTTCCATTACAATGCAGATTTATGGAACCCTATTAGCA
TCTGATGATACTTCAGATTACAACAAGGATAGTAGGCACTGGCTTATTTTTGATAGTGTT
CAAAAATTGGTTGTTGGAGGAGCTGGAGTTATCAATGGCAATGGCAAAATTTGGTGGCAA
AATTCTTGCAAAATTAATAAAAAATTGCACTGCAAGGTTGCACCCACGGCCCTAACATTT
TACAAGTGCAACAACTTGAAGGTGAAGGACCTTAAAATAGAAAATGCACAACAAATACAT
TTGCTAATTGAGAAATGTGTTGGTGTTGAAGTTTCAAAATTGGTAGTGAGTTCTCCAGAA
AATAGCCCTAACACTGATGGAATCCATATTACTAACACTCAAAATATTCAAATTTCTGAC
TCCACCATTGGCACAGGTGATGATTGCATCTCAATAGTGGATGGATCTCAAAAGGTCCTA
GCCACTGGCATTACTTGTGGACCAGGTCATGGAATAAGTATTGGAAGTTTGGGAGGTGGA
AATTCAGAAGCTCATGTGTCTGATATTCATGTAAATGGAGCTAAGCTTTATGGAACTACG
AATGGACTTAGGATTAAGACTTGGCCGGGAGGATTTGGAAGTGCAAGCAATATTAAGTTT
CAAAATGTGGCTATGAATAATGTCAAAAATCCAATAATTATAGACCAAAATTATTGTGAT
CAAGCTGATGGTCCATGCAAAGCTGAGACCGACTCAGCAATTCAAGTGAAAAATGTGATT
TATCAAAATATCAAAGGCACAAGTGCAACAAATGATGCAATAAATTTCAATTGCAGCAAA
AAAATTCCATGTCAAGGAATTTTGTTGGAGAATGTGAAATTGTTAGGAGGAAATGGTGAA
ACTCCAAATGCTATTTGGGGAAATATTAACAATCTTACATGCAACAATGTTTTACCAGAA
TGTAAAAAAACTCAAAAAATTGTATAA