Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400069974
CDS Infomation

pacid=37443960 polypeptide=PGSC0003DMP400047296 locus=PGSC0003DMG400027211 ID=PGSC0003DMT400069974.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTGGAAGTGGAAGTAGAGGTAAATATGGTCGTAATCATCAGCCAAAAAATCAA
TCTCAATTTTCAGTTACAAGTAATAATGCATTAAGCAAAGCAGTAGCACAATATACAACT
GATGCTAGGCTACATGCTGCATTTGAACAATCTGGAGAGTCTTTTGATTATTCACAATCT
GTTAGAAATACTACAGAATCTGTAACAGAGCATCAAATTACTGCTTATTTGAATAAAATG
CAAAGAGGGGGTCATATTCAGCCTTTTGGTTGTACGATAGCTGTTGATGAGTTGAGTTTT
TGTGTTATTGCTTACAGTGAAAATGCATGTGAGATGCTTGATATAATGCCGCAATCAGTT
CCAAGTCTTGAGAAGACTGAAATTCTCAAGATTGGAACTGATGTGAGGACCCTTTTTAGT
TCTTCGAGTTCTGGTTTGCTTGAAGGAGCTTTTGGGGCACGTGAAATTACGTTGTTGAAT
CCGATTTGGGTTCATTCGAAGAATTCTGGGAAACCCTTTTATGCGATATTGCATAGGATT
GATGTGGGGATTGTGATTGATTTAGAGCCAGCTAGAACAGAAGACCCTGCATTGTCTATT
GCTGGAGCTGTGCAATCGCAGAAACTTGCTGTGAGAGCTATTTCGCTTTTGCAATCGTTA
CCTGGTGGGGATATTGATCTTTTGTGTGATACTGTTGTTAAGAGTGTGAGGGAGCTTACA
GGGTATGATCGGGTTATGGTGTATAAGTTTCATGATGATGAACATGGGGAGGTCGTGGCG
GAGAGGAGAAGATCGGATTTGGAACCTTATATTGGTTTGCATTATCCAGCTACTGATATT
CCACAAGCATCAAGATTCTTGTTTAAGCAGAACAGGGTTAGAATGATTGTGGATTGTACT
GCCACACCTGTGAGGGTTATTCAGGATGAATTACTCAAGCAGCCTTTATGTTTAGTTGGC
TCAACACTTAGGGCTCCTCATGGTTGTCACCCTCAGTATATGGTCAATATGGGAAATGTT
GCGTCATTAACACTGGCTGTTGTTATAAATGGAAATGATGATGAAGTTGCTGGAGGCCGA
AATGCAATGAGATTATGGGGGTTGGTTGTTGGGCACCACAGTTCAACTCGGTTCACTCCT
TACCCCCTTCGTTATGCCTGTGAATTCCTTATGCAGGCATTCGGGCTCCAACTAAACATG
GAATTACAATTGGCATCGCAGTTGGCTGAAAAGCGTGTTTTGAGGACACAGACACTGTTA
TGTGACATGCTTCTCCGAGACTCACCTACGGGGATTGTTACTCAGAACCCAAGTATTGTC
GACCTTGTGAAATGTGATGGGGCCGCTTTGTACTACCAGGGGAGATACTATCCTTTGGGA
ATTACACCTGCTGAAGCCCAAATAAAGGGCATTGTGGAGTGGCTATTAACTTGTCATGTG
GACTCAACAGGCCTAAGTACTGATAGTTTGGCTGATGCAGGGTATCCTGAGGCAGCTTCT
CTTGGTGCTGCTGTTTGTGGGATGGCTGTTGCTTATGTAACTTCAAAATATTTCCTTTTT
TGGTTCCGTTCGCACACTGCGAGCGAGATAAAGTGGGGTGGTGCAAAGCATCATCCAGAA
GACAAAGATGATTGGCAGAAAATGCATCCACGTTCTTCCTTTAAGGCATTTTTGGAAGTT
GTTAAGAGCCGCAGCTTACCATGGGAGAATGCAGAAATGGATGCAATTCACTCTTTGCAG
CTTATACTACGTGATTCATTCAAGGATGCTGAGGCAAGTAATTCAAAGGCTATTGTGCAT
GTTCAGCTTCAGGAAGAGGGGTTGCAAGGGATGGATGAACTGAGATCTGTTGCCAGAGAA
ATGGTTAGATTGGTAGAGACTGCTACAGCACCCATATTTGCCGTTGATGTTGAAGGTCGC
ATAAATGGATGGAATGCTAAAGTTGCCGAGTTGACAGAGTTGTCAGTTGAAGAAGCAATA
GGGAAGTCGTTGGTTCATGATCTTGTCCATGAAGAATCACAGAGAACTGCTGAGAACCTG
ATCCACAATGCTTTAAGAGGTGAAGAAGATAAGAACATAGAAATAAAGTTGAGGACATTT
GGAGCTGAGCAACTGAAGAAGACTGTTTTTGTGGTGGTTAATGCTTGCTCTAGCAAAGAC
TACACAAATAACATTGTTGGTGTCTGCTTCATTGGCCAGGATATTACCGCCCAAAAAGTT
GTACTGGACAAATTTGTTCGCATACAAGGTGATTACAAGGCCATTATGCACAGCCCTAAT
CCTCTGATCCCGCCCATTTTTGTATCAGATGAGAACACTTGTTGCTTTGAGTGGAACACT
GCGATGGAAAAACTTAGTGGTTGGAACAAAGAAGAAATCATTGGGAAAATGTTGGTTGGT
GAGATATTTGGCACTTTCTGCCAGCTCAAGGGCCCAGACGCCATGACAAAATTCATGATC
ATGTTGCATAAGGCAATTGGAGGCCAGGAGATAGACAAGTTCCCTTTTTCCTTTTCTGAC
CGAAATGGAAAATCTGTTCAAGCTCTTTTGACTGCAAACAAGAGAGTCAATGTGGATGGC
CAAATTATTGGGGCCTTTTGTTTCTTGCAGATTGCAAGTCCTGAATTGCAGAAAACTCTA
CTGCAGAGACAACAGGAAAAGACTAGTAACTTTCGGATGAAAGAGTTGGCTTACATTTTA
CGGGAAATAAAGAATCCTCTAAATGGTATACGCTTTACAAATTCATTACTAGAGGCCACA
GAATTGACCGAAAACCAGAAGCAGTTTCTGGAAACAAGTGCTGCTTGTGAGAGGCAGATG
TTTAAGATCATAAGGGATGTTGATCTGGACAATATTGAGGATGGTTCACTGGAGCTTGAG
AAAGGAGAATTTTTTCTTGCGAGTGTGATAGATGCTGTTGTTAGCCAAGTTATGTTATTA
TTGAGGGAAAGAGGTGTGCAACTTATCCGGGATATTCCAGACGAAATCAAGACATTGAGG
GTCTATGGAGATCAAGTGAGAATTCAACAGGTTTTTGCTGATTTCTTGCAGATTATGGCA
AGCTACACACCATCCCGACAAGGGTGGGTAGAAGTCCATCTTCAACCAAGTATAAATCAA
ATTTCAGATGGAGCAACTATGGTACATATTGAGTTCAGGATTGTTTGTCCTGGTGAAGGT
CTTCCTCATGAATTGATCCAAGATATGTTCCACAATAGTCAGTGGGTAACTCAACAAGGT
CTAGGGCTAAGCATGTGTAGAAGAATCCTACAGCTTATGAATGGTCAAGTCCAGTATATC
AGAGAATCAGAAAGATGTTTTTTCCTAATTATCCTTCAACTACCAATGCCCCAAAGTGAT
TCAATGAGTGTTAGATAG

Peptide Sequence

PEP ID

PGSC0003DMP400047296
PEP Infomation

pacid=37443960 transcript=PGSC0003DMT400069974 locus=PGSC0003DMG400027211 ID=PGSC0003DMT400069974.v4.03 annot-version=v4.03
Sequence

MASGSGSRGKYGRNHQPKNQSQFSVTSNNALSKAVAQYTTDARLHAAFEQSGESFDYSQS
VRNTTESVTEHQITAYLNKMQRGGHIQPFGCTIAVDELSFCVIAYSENACEMLDIMPQSV
PSLEKTEILKIGTDVRTLFSSSSSGLLEGAFGAREITLLNPIWVHSKNSGKPFYAILHRI
DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISLLQSLPGGDIDLLCDTVVKSVRELT
GYDRVMVYKFHDDEHGEVVAERRRSDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCT
ATPVRVIQDELLKQPLCLVGSTLRAPHGCHPQYMVNMGNVASLTLAVVINGNDDEVAGGR
NAMRLWGLVVGHHSSTRFTPYPLRYACEFLMQAFGLQLNMELQLASQLAEKRVLRTQTLL
CDMLLRDSPTGIVTQNPSIVDLVKCDGAALYYQGRYYPLGITPAEAQIKGIVEWLLTCHV
DSTGLSTDSLADAGYPEAASLGAAVCGMAVAYVTSKYFLFWFRSHTASEIKWGGAKHHPE
DKDDWQKMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDAEASNSKAIVH
VQLQEEGLQGMDELRSVAREMVRLVETATAPIFAVDVEGRINGWNAKVAELTELSVEEAI
GKSLVHDLVHEESQRTAENLIHNALRGEEDKNIEIKLRTFGAEQLKKTVFVVVNACSSKD
YTNNIVGVCFIGQDITAQKVVLDKFVRIQGDYKAIMHSPNPLIPPIFVSDENTCCFEWNT
AMEKLSGWNKEEIIGKMLVGEIFGTFCQLKGPDAMTKFMIMLHKAIGGQEIDKFPFSFSD
RNGKSVQALLTANKRVNVDGQIIGAFCFLQIASPELQKTLLQRQQEKTSNFRMKELAYIL
REIKNPLNGIRFTNSLLEATELTENQKQFLETSAACERQMFKIIRDVDLDNIEDGSLELE
KGEFFLASVIDAVVSQVMLLLRERGVQLIRDIPDEIKTLRVYGDQVRIQQVFADFLQIMA
SYTPSRQGWVEVHLQPSINQISDGATMVHIEFRIVCPGEGLPHELIQDMFHNSQWVTQQG
LGLSMCRRILQLMNGQVQYIRESERCFFLIILQLPMPQSDSMSVR*

Transcript Sequence

Transcript ID

PGSC0003DMT400069974
Transcript Infomation

pacid=37443960 locus=PGSC0003DMG400027211 ID=PGSC0003DMT400069974.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTGGAAGTGGAAGTAGAGGTAAATATGGTCGTAATCATCAGCCAAAAAATCAA
TCTCAATTTTCAGTTACAAGTAATAATGCATTAAGCAAAGCAGTAGCACAATATACAACT
GATGCTAGGCTACATGCTGCATTTGAACAATCTGGAGAGTCTTTTGATTATTCACAATCT
GTTAGAAATACTACAGAATCTGTAACAGAGCATCAAATTACTGCTTATTTGAATAAAATG
CAAAGAGGGGGTCATATTCAGCCTTTTGGTTGTACGATAGCTGTTGATGAGTTGAGTTTT
TGTGTTATTGCTTACAGTGAAAATGCATGTGAGATGCTTGATATAATGCCGCAATCAGTT
CCAAGTCTTGAGAAGACTGAAATTCTCAAGATTGGAACTGATGTGAGGACCCTTTTTAGT
TCTTCGAGTTCTGGTTTGCTTGAAGGAGCTTTTGGGGCACGTGAAATTACGTTGTTGAAT
CCGATTTGGGTTCATTCGAAGAATTCTGGGAAACCCTTTTATGCGATATTGCATAGGATT
GATGTGGGGATTGTGATTGATTTAGAGCCAGCTAGAACAGAAGACCCTGCATTGTCTATT
GCTGGAGCTGTGCAATCGCAGAAACTTGCTGTGAGAGCTATTTCGCTTTTGCAATCGTTA
CCTGGTGGGGATATTGATCTTTTGTGTGATACTGTTGTTAAGAGTGTGAGGGAGCTTACA
GGGTATGATCGGGTTATGGTGTATAAGTTTCATGATGATGAACATGGGGAGGTCGTGGCG
GAGAGGAGAAGATCGGATTTGGAACCTTATATTGGTTTGCATTATCCAGCTACTGATATT
CCACAAGCATCAAGATTCTTGTTTAAGCAGAACAGGGTTAGAATGATTGTGGATTGTACT
GCCACACCTGTGAGGGTTATTCAGGATGAATTACTCAAGCAGCCTTTATGTTTAGTTGGC
TCAACACTTAGGGCTCCTCATGGTTGTCACCCTCAGTATATGGTCAATATGGGAAATGTT
GCGTCATTAACACTGGCTGTTGTTATAAATGGAAATGATGATGAAGTTGCTGGAGGCCGA
AATGCAATGAGATTATGGGGGTTGGTTGTTGGGCACCACAGTTCAACTCGGTTCACTCCT
TACCCCCTTCGTTATGCCTGTGAATTCCTTATGCAGGCATTCGGGCTCCAACTAAACATG
GAATTACAATTGGCATCGCAGTTGGCTGAAAAGCGTGTTTTGAGGACACAGACACTGTTA
TGTGACATGCTTCTCCGAGACTCACCTACGGGGATTGTTACTCAGAACCCAAGTATTGTC
GACCTTGTGAAATGTGATGGGGCCGCTTTGTACTACCAGGGGAGATACTATCCTTTGGGA
ATTACACCTGCTGAAGCCCAAATAAAGGGCATTGTGGAGTGGCTATTAACTTGTCATGTG
GACTCAACAGGCCTAAGTACTGATAGTTTGGCTGATGCAGGGTATCCTGAGGCAGCTTCT
CTTGGTGCTGCTGTTTGTGGGATGGCTGTTGCTTATGTAACTTCAAAATATTTCCTTTTT
TGGTTCCGTTCGCACACTGCGAGCGAGATAAAGTGGGGTGGTGCAAAGCATCATCCAGAA
GACAAAGATGATTGGCAGAAAATGCATCCACGTTCTTCCTTTAAGGCATTTTTGGAAGTT
GTTAAGAGCCGCAGCTTACCATGGGAGAATGCAGAAATGGATGCAATTCACTCTTTGCAG
CTTATACTACGTGATTCATTCAAGGATGCTGAGGCAAGTAATTCAAAGGCTATTGTGCAT
GTTCAGCTTCAGGAAGAGGGGTTGCAAGGGATGGATGAACTGAGATCTGTTGCCAGAGAA
ATGGTTAGATTGGTAGAGACTGCTACAGCACCCATATTTGCCGTTGATGTTGAAGGTCGC
ATAAATGGATGGAATGCTAAAGTTGCCGAGTTGACAGAGTTGTCAGTTGAAGAAGCAATA
GGGAAGTCGTTGGTTCATGATCTTGTCCATGAAGAATCACAGAGAACTGCTGAGAACCTG
ATCCACAATGCTTTAAGAGGTGAAGAAGATAAGAACATAGAAATAAAGTTGAGGACATTT
GGAGCTGAGCAACTGAAGAAGACTGTTTTTGTGGTGGTTAATGCTTGCTCTAGCAAAGAC
TACACAAATAACATTGTTGGTGTCTGCTTCATTGGCCAGGATATTACCGCCCAAAAAGTT
GTACTGGACAAATTTGTTCGCATACAAGGTGATTACAAGGCCATTATGCACAGCCCTAAT
CCTCTGATCCCGCCCATTTTTGTATCAGATGAGAACACTTGTTGCTTTGAGTGGAACACT
GCGATGGAAAAACTTAGTGGTTGGAACAAAGAAGAAATCATTGGGAAAATGTTGGTTGGT
GAGATATTTGGCACTTTCTGCCAGCTCAAGGGCCCAGACGCCATGACAAAATTCATGATC
ATGTTGCATAAGGCAATTGGAGGCCAGGAGATAGACAAGTTCCCTTTTTCCTTTTCTGAC
CGAAATGGAAAATCTGTTCAAGCTCTTTTGACTGCAAACAAGAGAGTCAATGTGGATGGC
CAAATTATTGGGGCCTTTTGTTTCTTGCAGATTGCAAGTCCTGAATTGCAGAAAACTCTA
CTGCAGAGACAACAGGAAAAGACTAGTAACTTTCGGATGAAAGAGTTGGCTTACATTTTA
CGGGAAATAAAGAATCCTCTAAATGGTATACGCTTTACAAATTCATTACTAGAGGCCACA
GAATTGACCGAAAACCAGAAGCAGTTTCTGGAAACAAGTGCTGCTTGTGAGAGGCAGATG
TTTAAGATCATAAGGGATGTTGATCTGGACAATATTGAGGATGGTTCACTGGAGCTTGAG
AAAGGAGAATTTTTTCTTGCGAGTGTGATAGATGCTGTTGTTAGCCAAGTTATGTTATTA
TTGAGGGAAAGAGGTGTGCAACTTATCCGGGATATTCCAGACGAAATCAAGACATTGAGG
GTCTATGGAGATCAAGTGAGAATTCAACAGGTTTTTGCTGATTTCTTGCAGATTATGGCA
AGCTACACACCATCCCGACAAGGGTGGGTAGAAGTCCATCTTCAACCAAGTATAAATCAA
ATTTCAGATGGAGCAACTATGGTACATATTGAGTTCAGGATTGTTTGTCCTGGTGAAGGT
CTTCCTCATGAATTGATCCAAGATATGTTCCACAATAGTCAGTGGGTAACTCAACAAGGT
CTAGGGCTAAGCATGTGTAGAAGAATCCTACAGCTTATGAATGGTCAAGTCCAGTATATC
AGAGAATCAGAAAGATGTTTTTTCCTAATTATCCTTCAACTACCAATGCCCCAAAGTGAT
TCAATGAGTGTTAGATAG