Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400069945
CDS Infomation

pacid=37444448 polypeptide=PGSC0003DMP400047270 locus=PGSC0003DMG400027195 ID=PGSC0003DMT400069945.v4.03 annot-version=v4.03
Sequence

ATGAACCAAATTTCCATCGACCGTGCCGGAAACGATTCGTCATCCAAGTCTGTAAACGAA
ACGGTGAATGGGTCTCACCATTTTACCATCAGGGGTTACTCTTTGGCCAAAGGAATGGGA
CCTGGAAAGTACATATCTAGCGACATTTTCACCGTTGGTGGGTATGATTGGGCAATTTAT
TTCTACCCAGATGGTAAAAACATAGAGGATTCTTCCATGTATGTGTCTGTTTTTATAGCA
TTGGCTAGCGAAGGAACAGATGTTAGGGCGTTGTTTGAGTTGACGATGTTGGATCAGAGT
GGAAAAGTGAAACATAAAGTTCATAGCCATTTTGATCGGGCATTGGAAAGTGGACCTTAT
ACTTTGAAATATAGAGGAAGCATGTGGGGTTACAAACGATTTTTTAGAAGAGCAAGTTTA
GAAATGTCTGACTACCTGAAGGATGATTGCCTTTCCATGCACTGTACTGTTGGAGTTGTC
AGAACTCGTGTTGAAGGCCCAAAAGATTATAGTGTTACAATTCCACCATCAGACATGGGC
CAAAGTCTCAAATACTTGCTGGATGCTGAACTTGGTTGTGATATAGTTTTCCGGGTTGGA
GAAGAGGCATTTAAGGGTCATAAGTTGATACTTGCTGCTCGGTCTCCTGTGTTTAGAGCC
CAATTCTTTGGCCTTATTGGGAATCCTAAAACGGACGAAGTGGAAATTGAGGATATTGAA
CCCTCAGTCTTCAAGGCTATGCTCCAGTACATTTATTCTGATGAGCTTCCAGATTTAATT
GAAATTACTGGCTCTACTTCAACTTGCACTTCTACGATAGTGATGCAGCATTTATTGGCA
GCAGCTGATCGATTTGGTTTGGATAGGTTGAAAGAGTTATGTGAGGCGAAATTGTGTGAA
GAAGTCAATGTGGATACTGTGGCAACAACTCTTTCTCTTGCTGAGCAGCATCGATGCCCA
CAACTCAAGGCCATCTGTTTGAAATTTGCAGCTACAAACTTGGGAGGTGCGTGTTCTCCA
TAG

Peptide Sequence

PEP ID

PGSC0003DMP400047270
PEP Infomation

pacid=37444448 transcript=PGSC0003DMT400069945 locus=PGSC0003DMG400027195 ID=PGSC0003DMT400069945.v4.03 annot-version=v4.03
Sequence

MNQISIDRAGNDSSSKSVNETVNGSHHFTIRGYSLAKGMGPGKYISSDIFTVGGYDWAIY
FYPDGKNIEDSSMYVSVFIALASEGTDVRALFELTMLDQSGKVKHKVHSHFDRALESGPY
TLKYRGSMWGYKRFFRRASLEMSDYLKDDCLSMHCTVGVVRTRVEGPKDYSVTIPPSDMG
QSLKYLLDAELGCDIVFRVGEEAFKGHKLILAARSPVFRAQFFGLIGNPKTDEVEIEDIE
PSVFKAMLQYIYSDELPDLIEITGSTSTCTSTIVMQHLLAAADRFGLDRLKELCEAKLCE
EVNVDTVATTLSLAEQHRCPQLKAICLKFAATNLGGACSP*

Transcript Sequence

Transcript ID

PGSC0003DMT400069945
Transcript Infomation

pacid=37444448 locus=PGSC0003DMG400027195 ID=PGSC0003DMT400069945.v4.03 annot-version=v4.03
Sequence

ATGAACCAAATTTCCATCGACCGTGCCGGAAACGATTCGTCATCCAAGTCTGTAAACGAA
ACGGTGAATGGGTCTCACCATTTTACCATCAGGGGTTACTCTTTGGCCAAAGGAATGGGA
CCTGGAAAGTACATATCTAGCGACATTTTCACCGTTGGTGGGTATGATTGGGCAATTTAT
TTCTACCCAGATGGTAAAAACATAGAGGATTCTTCCATGTATGTGTCTGTTTTTATAGCA
TTGGCTAGCGAAGGAACAGATGTTAGGGCGTTGTTTGAGTTGACGATGTTGGATCAGAGT
GGAAAAGTGAAACATAAAGTTCATAGCCATTTTGATCGGGCATTGGAAAGTGGACCTTAT
ACTTTGAAATATAGAGGAAGCATGTGGGGTTACAAACGATTTTTTAGAAGAGCAAGTTTA
GAAATGTCTGACTACCTGAAGGATGATTGCCTTTCCATGCACTGTACTGTTGGAGTTGTC
AGAACTCGTGTTGAAGGCCCAAAAGATTATAGTGTTACAATTCCACCATCAGACATGGGC
CAAAGTCTCAAATACTTGCTGGATGCTGAACTTGGTTGTGATATAGTTTTCCGGGTTGGA
GAAGAGGCATTTAAGGGTCATAAGTTGATACTTGCTGCTCGGTCTCCTGTGTTTAGAGCC
CAATTCTTTGGCCTTATTGGGAATCCTAAAACGGACGAAGTGGAAATTGAGGATATTGAA
CCCTCAGTCTTCAAGGCTATGCTCCAGTACATTTATTCTGATGAGCTTCCAGATTTAATT
GAAATTACTGGCTCTACTTCAACTTGCACTTCTACGATAGTGATGCAGCATTTATTGGCA
GCAGCTGATCGATTTGGTTTGGATAGGTTGAAAGAGTTATGTGAGGCGAAATTGTGTGAA
GAAGTCAATGTGGATACTGTGGCAACAACTCTTTCTCTTGCTGAGCAGCATCGATGCCCA
CAACTCAAGGCCATCTGTTTGAAATTTGCAGCTACAAACTTGGGAGGTGCGTGTTCTCCA
TAG