Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400069893
CDS Infomation

pacid=37441954 polypeptide=PGSC0003DMP400047228 locus=PGSC0003DMG400027178 ID=PGSC0003DMT400069893.v4.03 annot-version=v4.03
Sequence

ATGGTGAAACAACAATCTATGAACAATCTCGAAATCGATGATGAGGTAGAGAATTCAACT
CTCCAGGAGGAATTGGATGATTCATCGTCGGAGGATGCTTTGTACGATGACGTTTTATCG
AGCGGTATGTTTGCATCAGGAGAAACGAACGTTCTTCAGTGGCTTCTGGCTCTGGATTTG
CAGGTTTTGGGAGCTTGTAGAGTGGATGAGAGGTTAAAGCCTTTGTTGAAGCTAAATGTT
TCTGCTGGTGCTGCTGAAGATCGATTGCTCGCTCATCTTAGTCAAAACTTTGAGCCATCG
GAAGTTGGAATGCTCGCGAGGTGTTTGTGCATTCCACTTGTTTCAATGCGGGTTGGGAAG
ATCAGGAAGCAAGGGACGCTGTTGTGCCCAACTGCTACAAGGGGGAACTTAAACCTTGCA
ATTCTGCCAACATCGGACTTGCGCATCTCATTCATTGGGGATGACGGCAGCACAGAGAGA
GTTGGAACATTTTGCAGTGAATCTGATTGTTCTGCCATAGAGATCAAAGATATTGTAGCA
GACGAGTCTGGACGCTCTTTTCTTATTAGTATCCCTGATGGTGAGACTTTCTACTTTTGG
TGTTCAGAGAAGTCTAAGCTCCTTGGAGATGAGTTGCGGAGAAAGATGAGGGATTTGATT
AAGATGAAGCCTTCCTTGGCTGAATTAACTGGAATCGATGAATCGCGGATAGACTGTTTC
GCCATTCATCTTCGAGCTTATCTTCATGGTTCAGCAGCCATAAATCCTCAAGCAAGTTCC
ATGATGTCAAGAGATCCTTCCATTGCTGGCTTTGTTGATTCTTCAGAACTTGGTCTTGAT
GCCCAGATATCAGTTGCATCTAAGAAACCTCTGCGGCCTGAGCACGTAAGTAGCATGGGA
TCAAACACCAGCTTGATGAGCAGCCTTAGTCCTATGTCTAATGCTTTTAAAGATAGCATG
CTCAGGAACTCGTCATCTGTATTTGTTTCTAGAGACGGGCCGAGGCAGCATGGTGATAGC
TATCTTTCATGTGTAGATAGCCAGATTGCAGGCATAAGTAGCACAGATGCACTCAGTTCA
ACTTATGTTGAAGACAATAAGATTGGAAGAGAAACTCGTCCTTCAAATGTTTTGGAGCCA
CTTGTTGCTGCCTTTCCTTTCCGAGGCTCTGCAGCTACTGTTCATTCTCTGGATTCAACA
GTTTTCTCTCCTTATTACTGTTGGTGTCCTCCTGCTGTATCCACTCTGCAGTACTCAGTT
GGAACTCCACATTTGCCTATTTTATCCACAGACTCGTCAATACCACTACTTTCATCACTA
GCACCTTCTGCTTGTTCATCTAGTATTTTGACATCAAAGCCGTCTCTTGTCACTGATGTC
TCCTCTTTAGATTTCCCACCTCTTCTGCCCGAGCCATTGATCAGGTTGCCATTTTCTTTG
GGGCCTTCACAGCAAATACCTACTTTCACACCTTTAGTAGGCGATTCTATAGTTCATATT
CCTGTTATTGACGTGTGCTCTTCTGGCCAAGGTTACTTTGTCAGCGCAGGCCCTGCTATC
TCTGGCAGTATTCCACAGTTACACCCAAATTTAGTGAATCCTTTAATTCCTGCAGAAACA
GAATCAATGGCTGAGAAAAGTGCCAGGGAGACTCTTCGGTTGCTCATAAATAACTCCAAC
CAGCCCAGTCCACAGCTGATTGATCTACTGCCTCCTGTGCTTTCTCGTAGTGGTGAAGAG
ACACGAAATATGCTGGTTACTGGAAGCAGAGGACTTTACTCTAGAACCATAGGTGTTGAT
ACCACAATAGCAAATGATTTTGCATTTAAGGGTTTGGCTTCATTATCTGAAAAGCCTGTT
GGTGGATGGCTTGATATGAAGAAAATTCGTATACAAGAGATGTTTGTTCCAACGGATAAA
CCAGGTATTTCTGGTGAATCTTCAATGGATGATGATGGTGGTTTTATAGATTTTGAAGAG
GAAAGAAAGAATTGTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400047228
PEP Infomation

pacid=37441954 transcript=PGSC0003DMT400069893 locus=PGSC0003DMG400027178 ID=PGSC0003DMT400069893.v4.03 annot-version=v4.03
Sequence

MVKQQSMNNLEIDDEVENSTLQEELDDSSSEDALYDDVLSSGMFASGETNVLQWLLALDL
QVLGACRVDERLKPLLKLNVSAGAAEDRLLAHLSQNFEPSEVGMLARCLCIPLVSMRVGK
IRKQGTLLCPTATRGNLNLAILPTSDLRISFIGDDGSTERVGTFCSESDCSAIEIKDIVA
DESGRSFLISIPDGETFYFWCSEKSKLLGDELRRKMRDLIKMKPSLAELTGIDESRIDCF
AIHLRAYLHGSAAINPQASSMMSRDPSIAGFVDSSELGLDAQISVASKKPLRPEHVSSMG
SNTSLMSSLSPMSNAFKDSMLRNSSSVFVSRDGPRQHGDSYLSCVDSQIAGISSTDALSS
TYVEDNKIGRETRPSNVLEPLVAAFPFRGSAATVHSLDSTVFSPYYCWCPPAVSTLQYSV
GTPHLPILSTDSSIPLLSSLAPSACSSSILTSKPSLVTDVSSLDFPPLLPEPLIRLPFSL
GPSQQIPTFTPLVGDSIVHIPVIDVCSSGQGYFVSAGPAISGSIPQLHPNLVNPLIPAET
ESMAEKSARETLRLLINNSNQPSPQLIDLLPPVLSRSGEETRNMLVTGSRGLYSRTIGVD
TTIANDFAFKGLASLSEKPVGGWLDMKKIRIQEMFVPTDKPGISGESSMDDDGGFIDFEE
ERKNC*

Transcript Sequence

Transcript ID

PGSC0003DMT400069893
Transcript Infomation

pacid=37441954 locus=PGSC0003DMG400027178 ID=PGSC0003DMT400069893.v4.03 annot-version=v4.03
Sequence

ATGGTGAAACAACAATCTATGAACAATCTCGAAATCGATGATGAGGTAGAGAATTCAACT
CTCCAGGAGGAATTGGATGATTCATCGTCGGAGGATGCTTTGTACGATGACGTTTTATCG
AGCGGTATGTTTGCATCAGGAGAAACGAACGTTCTTCAGTGGCTTCTGGCTCTGGATTTG
CAGGTTTTGGGAGCTTGTAGAGTGGATGAGAGGTTAAAGCCTTTGTTGAAGCTAAATGTT
TCTGCTGGTGCTGCTGAAGATCGATTGCTCGCTCATCTTAGTCAAAACTTTGAGCCATCG
GAAGTTGGAATGCTCGCGAGGTGTTTGTGCATTCCACTTGTTTCAATGCGGGTTGGGAAG
ATCAGGAAGCAAGGGACGCTGTTGTGCCCAACTGCTACAAGGGGGAACTTAAACCTTGCA
ATTCTGCCAACATCGGACTTGCGCATCTCATTCATTGGGGATGACGGCAGCACAGAGAGA
GTTGGAACATTTTGCAGTGAATCTGATTGTTCTGCCATAGAGATCAAAGATATTGTAGCA
GACGAGTCTGGACGCTCTTTTCTTATTAGTATCCCTGATGGTGAGACTTTCTACTTTTGG
TGTTCAGAGAAGTCTAAGCTCCTTGGAGATGAGTTGCGGAGAAAGATGAGGGATTTGATT
AAGATGAAGCCTTCCTTGGCTGAATTAACTGGAATCGATGAATCGCGGATAGACTGTTTC
GCCATTCATCTTCGAGCTTATCTTCATGGTTCAGCAGCCATAAATCCTCAAGCAAGTTCC
ATGATGTCAAGAGATCCTTCCATTGCTGGCTTTGTTGATTCTTCAGAACTTGGTCTTGAT
GCCCAGATATCAGTTGCATCTAAGAAACCTCTGCGGCCTGAGCACGTAAGTAGCATGGGA
TCAAACACCAGCTTGATGAGCAGCCTTAGTCCTATGTCTAATGCTTTTAAAGATAGCATG
CTCAGGAACTCGTCATCTGTATTTGTTTCTAGAGACGGGCCGAGGCAGCATGGTGATAGC
TATCTTTCATGTGTAGATAGCCAGATTGCAGGCATAAGTAGCACAGATGCACTCAGTTCA
ACTTATGTTGAAGACAATAAGATTGGAAGAGAAACTCGTCCTTCAAATGTTTTGGAGCCA
CTTGTTGCTGCCTTTCCTTTCCGAGGCTCTGCAGCTACTGTTCATTCTCTGGATTCAACA
GTTTTCTCTCCTTATTACTGTTGGTGTCCTCCTGCTGTATCCACTCTGCAGTACTCAGTT
GGAACTCCACATTTGCCTATTTTATCCACAGACTCGTCAATACCACTACTTTCATCACTA
GCACCTTCTGCTTGTTCATCTAGTATTTTGACATCAAAGCCGTCTCTTGTCACTGATGTC
TCCTCTTTAGATTTCCCACCTCTTCTGCCCGAGCCATTGATCAGGTTGCCATTTTCTTTG
GGGCCTTCACAGCAAATACCTACTTTCACACCTTTAGTAGGCGATTCTATAGTTCATATT
CCTGTTATTGACGTGTGCTCTTCTGGCCAAGGTTACTTTGTCAGCGCAGGCCCTGCTATC
TCTGGCAGTATTCCACAGTTACACCCAAATTTAGTGAATCCTTTAATTCCTGCAGAAACA
GAATCAATGGCTGAGAAAAGTGCCAGGGAGACTCTTCGGTTGCTCATAAATAACTCCAAC
CAGCCCAGTCCACAGCTGATTGATCTACTGCCTCCTGTGCTTTCTCGTAGTGGTGAAGAG
ACACGAAATATGCTGGTTACTGGAAGCAGAGGACTTTACTCTAGAACCATAGGTGTTGAT
ACCACAATAGCAAATGATTTTGCATTTAAGGGTTTGGCTTCATTATCTGAAAAGCCTGTT
GGTGGATGGCTTGATATGAAGAAAATTCGTATACAAGAGATGTTTGTTCCAACGGATAAA
CCAGGTATTTCTGGTGAATCTTCAATGGATGATGATGGTGGTTTTATAGATTTTGAAGAG
GAAAGAAAGAATTGTTAA