Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400069883
CDS Infomation

pacid=37444983 polypeptide=PGSC0003DMP400047219 locus=PGSC0003DMG400027174 ID=PGSC0003DMT400069883.v4.03 annot-version=v4.03
Sequence

ATGCCTTGTGCCATAGCAATAACAAATTCTCAAATATTCTCACCATCACAACAAACACCC
AAACTAATTAATTCACCATTTTTCTGTAAACCATCATCTATACAATCGCCGGTAAATCTG
TCGTCCTTCTATGCATCATCATCACTATCTCCGGTGCCGGCGCCGGCAGTTTTATGTCAA
TCACCTCTATCGCCGTTGACTAATTGCTACAACAGAAATCTAAGGGAAGAGGAGGAACCG
ACGGAGTGCTCCACGTTGTCATCGTCGACGACGGCAGAGGCGGTGGCGATTTCAAAGAGG
AAGAGGCCGGCGAGGATTTCGATTCCGATCGTATCGTTAGGTTTGGGAACCGTTGGTGAA
ACTCCGAGGGAAGAGAGTAGGGTGGATGAAGTGGAAGTTGAAGGAGAAGGTTACTCTGTG
TTTTGTAAAAGAGGGAAAAAAAGAGGTGATATGGAAGATCGGTATTCTGCGGTAGTTAAT
GATGATGCTAAAAACGGCTCTAAACAGGCCTTTTTTGGTGTATTTGATGGACATGGTGGA
GCAAAAGCTGCAGAGTTTGCGGCAAAGAATTTGGGCAGGAATATTATAAATGAAGTGGCG
TTGAGGAGTGAAGAGGGACTAGAAGAGGCAGTCAGAGAGGGTTACCTCACTACAGACGCG
GAGTTTCTTAAGCTAAATACAAATGGAGGGAGCTGTTGTGTGACTGCACTGGTACAGAAT
GGAGAACTTATTGTATCAAATGCTGGTGACTGTCGTGCTGTTATGAGCAGAGGAGGAGTG
GCAGAGGCACTCACAGTTGATCATTGTCCTTCGAGGCAAGATGAAATGGAAAGAATTCAA
CGCCTAGGTGGCTATGTAGATTGTTGCCGCGGTGTGTGGAGAATTCAAGGATCTCTTGCT
GTGTCACGAGGAATAGGAGATTCCCAGCTTAAGAGATGGGTGATAGCTGAACCAGAGACA
AAAATATTGACGATTGAACCAGAATGTGAATTCCTGATCTTGGCATCTGACGGTCTTTGG
GAAAAGGTAAGTAATCAAGAAGCAGTGGAGCTACTTCGACCTTTCTGCATAGGTGTTGAT
AGCCAACAACCTTTATCTGCTTGCAAAAAGCTTGTTGATTTGGCAGTAACGAGAGGATCC
TCTGATGACATAAGCGCAATGGTCATTCAACTAGGTCAATTCGTTCAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400047219
PEP Infomation

pacid=37444983 transcript=PGSC0003DMT400069883 locus=PGSC0003DMG400027174 ID=PGSC0003DMT400069883.v4.03 annot-version=v4.03
Sequence

MPCAIAITNSQIFSPSQQTPKLINSPFFCKPSSIQSPVNLSSFYASSSLSPVPAPAVLCQ
SPLSPLTNCYNRNLREEEEPTECSTLSSSTTAEAVAISKRKRPARISIPIVSLGLGTVGE
TPREESRVDEVEVEGEGYSVFCKRGKKRGDMEDRYSAVVNDDAKNGSKQAFFGVFDGHGG
AKAAEFAAKNLGRNIINEVALRSEEGLEEAVREGYLTTDAEFLKLNTNGGSCCVTALVQN
GELIVSNAGDCRAVMSRGGVAEALTVDHCPSRQDEMERIQRLGGYVDCCRGVWRIQGSLA
VSRGIGDSQLKRWVIAEPETKILTIEPECEFLILASDGLWEKVSNQEAVELLRPFCIGVD
SQQPLSACKKLVDLAVTRGSSDDISAMVIQLGQFVQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400069883
Transcript Infomation

pacid=37444983 locus=PGSC0003DMG400027174 ID=PGSC0003DMT400069883.v4.03 annot-version=v4.03
Sequence

ATGCCTTGTGCCATAGCAATAACAAATTCTCAAATATTCTCACCATCACAACAAACACCC
AAACTAATTAATTCACCATTTTTCTGTAAACCATCATCTATACAATCGCCGGTAAATCTG
TCGTCCTTCTATGCATCATCATCACTATCTCCGGTGCCGGCGCCGGCAGTTTTATGTCAA
TCACCTCTATCGCCGTTGACTAATTGCTACAACAGAAATCTAAGGGAAGAGGAGGAACCG
ACGGAGTGCTCCACGTTGTCATCGTCGACGACGGCAGAGGCGGTGGCGATTTCAAAGAGG
AAGAGGCCGGCGAGGATTTCGATTCCGATCGTATCGTTAGGTTTGGGAACCGTTGGTGAA
ACTCCGAGGGAAGAGAGTAGGGTGGATGAAGTGGAAGTTGAAGGAGAAGGTTACTCTGTG
TTTTGTAAAAGAGGGAAAAAAAGAGGTGATATGGAAGATCGGTATTCTGCGGTAGTTAAT
GATGATGCTAAAAACGGCTCTAAACAGGCCTTTTTTGGTGTATTTGATGGACATGGTGGA
GCAAAAGCTGCAGAGTTTGCGGCAAAGAATTTGGGCAGGAATATTATAAATGAAGTGGCG
TTGAGGAGTGAAGAGGGACTAGAAGAGGCAGTCAGAGAGGGTTACCTCACTACAGACGCG
GAGTTTCTTAAGCTAAATACAAATGGAGGGAGCTGTTGTGTGACTGCACTGGTACAGAAT
GGAGAACTTATTGTATCAAATGCTGGTGACTGTCGTGCTGTTATGAGCAGAGGAGGAGTG
GCAGAGGCACTCACAGTTGATCATTGTCCTTCGAGGCAAGATGAAATGGAAAGAATTCAA
CGCCTAGGTGGCTATGTAGATTGTTGCCGCGGTGTGTGGAGAATTCAAGGATCTCTTGCT
GTGTCACGAGGAATAGGAGATTCCCAGCTTAAGAGATGGGTGATAGCTGAACCAGAGACA
AAAATATTGACGATTGAACCAGAATGTGAATTCCTGATCTTGGCATCTGACGGTCTTTGG
GAAAAGGTAAGTAATCAAGAAGCAGTGGAGCTACTTCGACCTTTCTGCATAGGTGTTGAT
AGCCAACAACCTTTATCTGCTTGCAAAAAGCTTGTTGATTTGGCAGTAACGAGAGGATCC
TCTGATGACATAAGCGCAATGGTCATTCAACTAGGTCAATTCGTTCAATAA