Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400069878
CDS Infomation

pacid=37444617 polypeptide=PGSC0003DMP400047215 locus=PGSC0003DMG402027172 ID=PGSC0003DMT400069878.v4.03 annot-version=v4.03
Sequence

ATGCTGCTTAACAAAGTTACAGAAATTGTTTCTGCTGCAGTGGCTCGTTTCTCGACCCCA
AAGACATCTAACAGTCCATATCCATCATCGGGATTACCACCTCTTCCAGGTTCACTTAAT
GTTTCCAGCTTAGATCAGAAGAACAAGTTGAGACTTTCCTCCTCCCTTCAAGATCTTTCT
GCATACCGGCGCCTTGATCTGGAAGATGGTGGTCCTAACCCTGAAATAGAGAGGGATTCA
ACTAATTTAAAACGGCTGAATCTTTTCAAGAGAGAAAATTTGGGTACAAGCTTCTCCAAG
GTGAAGGGAACACCGACAGTCACTTCTGCACGAACAAAATGGACGCGAGTTATCTTTGTT
CTCCTGTGCTTGCTATTGGTTGCGTTTCTCCTATATGTGATGTTTTTCCATTTTAACTTA
TTCAGTAGAGACTCAAAGTATTATGTTGTGCTTGATTGTGGCAGCACTGGGACTCGTGTT
TATGTATATCAAGCATCCCCTAACTATGTAAAAGATAACGATCTCCCTATTGTATTGAGA
TCACTTCCAGAGAGTTTCCAAAGAAACTCAAGATTACAGAGTGGACGGGCTTATAACAGA
ATGGAGACAGAACCCGGATTTGACAAGTTGGTGCACAACACGTCTGGCTTGAAAAGAGCA
ATCAAGCCACTAATAAAATGGGCAGCAAAGCAAATCCCTAGGCATGCACATAAAACTACT
TATCTCTATCTTCATGCTACGGCTGGGGTCCGCAGGCTGCCAAATTCAGACTCGGAATGG
CTTCTTAACAATGCTTGGTCCATTCTGAAAAGTTCTCCTTTTTTATGCAAGAGGGAATGG
GTCAAAACTATCACGGGCATGGAGGAAGCTTATTTTGGATGGATAGCTATGAATTATCAT
ACTGGTATATTGGGAGCAAAACCTAAAAAGGGAACATTTGGTGCACTTGACTTAGGCGGC
TCATCACTGCAGGTTACTTTTGAGAGCAAGGAAAGTCTCCCTGACGAAACTAGTTTAGAA
CTGAATATTGGCGCCGTTAATCATCATCTTACTGCTTATTCCTTAGAAGGATATGGCCTG
AATGATGCTTTTGACAAGTCTGTAGTTCAACTTCTCAAAAGGCTTCCCAAGATCAGTGAT
GCAGATCTCACCAGTGGAAACATTGAGATCAAGCATCCATGTCTGAATTCTGGTTACAAG
GAGCAATATATCTGTACTCATTGTGTTTCCCTATACCAAGAAGGTGGCAATCCTTCTAGT
GGGAGAGAAGTTGCAAGTAAAGAGGGAAAGCCCGGAGTTCGCGTTCAGCTGGTTGGAGAC
CCAAAATGGGAAGAATGCAGTTCACTTGCAAAATTTGCTGTTAATTTGTCTGAATGGTCT
AACAAAAGTTCAGGAATTGATTGTGAGTTGCAGCCCTGTGCTCTTGCAGAAAATCTTCCT
CGTCCCTTTGGCCAGTTCTATGCTATGTCTGGTTTCTTTGTGGTATATCGTTTTTTCAAC
TTGACCCCTGATGCTGCGCTGGATGATGTATTAGAAAAGGGTCGGGAATTTTGTGATAAG
ACTTGGGATGTTGCAAAGACTAGTGTTGCACCTCAGCCTTTCATAGAACAGTATTGCTTC
AGGGCACCATATATTGTCTCTTTGCTGAGAGAAGGCTTGCACATTACTGATAGTCAAGTA
ACCATTGGTTCCGGAAGTATTACTTGGACACTAGGTGTTGCGCTGTCGGAAGCTGGAAAG
GCAGTTTCAACTGGGGCGGAACTTATTAGTTACAAGCTATTGCTCATGAAGATGCACCCA
GCTGTTGTTTTTGCTATTTTGTTTGCTTCATTAGCTGTTCTTCTTTGTACATTATCATGT
GTTGGCAAGTGGATGCCCAGGTTCTTCCGTAGGGCATATCTTCCCCTTTTCAGGAATAAT
AATGCTTCATCCACATCTATAATCAACATTCCAGCACCTTTCAATTTCAAGCGGTGGAGT
CCTGTTATAACAGGTGAAGGAAGAGTGAAGATGCCACTCAGTCCAACAATTGCTAATACT
CAACAGAGACCATTTGACACTGTGCATTGTTTTGGTGGCAACGGTATCCAGCTTGCTGAA
TCTTCCTTATACTCATCGTCTAGTAGTGTAGCGCACAGTTTTTCATCAGGTAGCTTGGGG
CAGATGCAATATGAAAGTAGTACCACAGGTTCCTTCTGGTCACCACACAGAAGCCAACAA
CGTCTCCAGAGCAGGAGATCCCAATCACGAGAAGATCTCATTTCTTCACTGTCTACCGAA
GTGCCCTTGCCAAAGGTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400047215
PEP Infomation

pacid=37444617 transcript=PGSC0003DMT400069878 locus=PGSC0003DMG402027172 ID=PGSC0003DMT400069878.v4.03 annot-version=v4.03
Sequence

MLLNKVTEIVSAAVARFSTPKTSNSPYPSSGLPPLPGSLNVSSLDQKNKLRLSSSLQDLS
AYRRLDLEDGGPNPEIERDSTNLKRLNLFKRENLGTSFSKVKGTPTVTSARTKWTRVIFV
LLCLLLVAFLLYVMFFHFNLFSRDSKYYVVLDCGSTGTRVYVYQASPNYVKDNDLPIVLR
SLPESFQRNSRLQSGRAYNRMETEPGFDKLVHNTSGLKRAIKPLIKWAAKQIPRHAHKTT
YLYLHATAGVRRLPNSDSEWLLNNAWSILKSSPFLCKREWVKTITGMEEAYFGWIAMNYH
TGILGAKPKKGTFGALDLGGSSLQVTFESKESLPDETSLELNIGAVNHHLTAYSLEGYGL
NDAFDKSVVQLLKRLPKISDADLTSGNIEIKHPCLNSGYKEQYICTHCVSLYQEGGNPSS
GREVASKEGKPGVRVQLVGDPKWEECSSLAKFAVNLSEWSNKSSGIDCELQPCALAENLP
RPFGQFYAMSGFFVVYRFFNLTPDAALDDVLEKGREFCDKTWDVAKTSVAPQPFIEQYCF
RAPYIVSLLREGLHITDSQVTIGSGSITWTLGVALSEAGKAVSTGAELISYKLLLMKMHP
AVVFAILFASLAVLLCTLSCVGKWMPRFFRRAYLPLFRNNNASSTSIINIPAPFNFKRWS
PVITGEGRVKMPLSPTIANTQQRPFDTVHCFGGNGIQLAESSLYSSSSSVAHSFSSGSLG
QMQYESSTTGSFWSPHRSQQRLQSRRSQSREDLISSLSTEVPLPKV*

Transcript Sequence

Transcript ID

PGSC0003DMT400069878
Transcript Infomation

pacid=37444617 locus=PGSC0003DMG402027172 ID=PGSC0003DMT400069878.v4.03 annot-version=v4.03
Sequence

ATGCTGCTTAACAAAGTTACAGAAATTGTTTCTGCTGCAGTGGCTCGTTTCTCGACCCCA
AAGACATCTAACAGTCCATATCCATCATCGGGATTACCACCTCTTCCAGGTTCACTTAAT
GTTTCCAGCTTAGATCAGAAGAACAAGTTGAGACTTTCCTCCTCCCTTCAAGATCTTTCT
GCATACCGGCGCCTTGATCTGGAAGATGGTGGTCCTAACCCTGAAATAGAGAGGGATTCA
ACTAATTTAAAACGGCTGAATCTTTTCAAGAGAGAAAATTTGGGTACAAGCTTCTCCAAG
GTGAAGGGAACACCGACAGTCACTTCTGCACGAACAAAATGGACGCGAGTTATCTTTGTT
CTCCTGTGCTTGCTATTGGTTGCGTTTCTCCTATATGTGATGTTTTTCCATTTTAACTTA
TTCAGTAGAGACTCAAAGTATTATGTTGTGCTTGATTGTGGCAGCACTGGGACTCGTGTT
TATGTATATCAAGCATCCCCTAACTATGTAAAAGATAACGATCTCCCTATTGTATTGAGA
TCACTTCCAGAGAGTTTCCAAAGAAACTCAAGATTACAGAGTGGACGGGCTTATAACAGA
ATGGAGACAGAACCCGGATTTGACAAGTTGGTGCACAACACGTCTGGCTTGAAAAGAGCA
ATCAAGCCACTAATAAAATGGGCAGCAAAGCAAATCCCTAGGCATGCACATAAAACTACT
TATCTCTATCTTCATGCTACGGCTGGGGTCCGCAGGCTGCCAAATTCAGACTCGGAATGG
CTTCTTAACAATGCTTGGTCCATTCTGAAAAGTTCTCCTTTTTTATGCAAGAGGGAATGG
GTCAAAACTATCACGGGCATGGAGGAAGCTTATTTTGGATGGATAGCTATGAATTATCAT
ACTGGTATATTGGGAGCAAAACCTAAAAAGGGAACATTTGGTGCACTTGACTTAGGCGGC
TCATCACTGCAGGTTACTTTTGAGAGCAAGGAAAGTCTCCCTGACGAAACTAGTTTAGAA
CTGAATATTGGCGCCGTTAATCATCATCTTACTGCTTATTCCTTAGAAGGATATGGCCTG
AATGATGCTTTTGACAAGTCTGTAGTTCAACTTCTCAAAAGGCTTCCCAAGATCAGTGAT
GCAGATCTCACCAGTGGAAACATTGAGATCAAGCATCCATGTCTGAATTCTGGTTACAAG
GAGCAATATATCTGTACTCATTGTGTTTCCCTATACCAAGAAGGTGGCAATCCTTCTAGT
GGGAGAGAAGTTGCAAGTAAAGAGGGAAAGCCCGGAGTTCGCGTTCAGCTGGTTGGAGAC
CCAAAATGGGAAGAATGCAGTTCACTTGCAAAATTTGCTGTTAATTTGTCTGAATGGTCT
AACAAAAGTTCAGGAATTGATTGTGAGTTGCAGCCCTGTGCTCTTGCAGAAAATCTTCCT
CGTCCCTTTGGCCAGTTCTATGCTATGTCTGGTTTCTTTGTGGTATATCGTTTTTTCAAC
TTGACCCCTGATGCTGCGCTGGATGATGTATTAGAAAAGGGTCGGGAATTTTGTGATAAG
ACTTGGGATGTTGCAAAGACTAGTGTTGCACCTCAGCCTTTCATAGAACAGTATTGCTTC
AGGGCACCATATATTGTCTCTTTGCTGAGAGAAGGCTTGCACATTACTGATAGTCAAGTA
ACCATTGGTTCCGGAAGTATTACTTGGACACTAGGTGTTGCGCTGTCGGAAGCTGGAAAG
GCAGTTTCAACTGGGGCGGAACTTATTAGTTACAAGCTATTGCTCATGAAGATGCACCCA
GCTGTTGTTTTTGCTATTTTGTTTGCTTCATTAGCTGTTCTTCTTTGTACATTATCATGT
GTTGGCAAGTGGATGCCCAGGTTCTTCCGTAGGGCATATCTTCCCCTTTTCAGGAATAAT
AATGCTTCATCCACATCTATAATCAACATTCCAGCACCTTTCAATTTCAAGCGGTGGAGT
CCTGTTATAACAGGTGAAGGAAGAGTGAAGATGCCACTCAGTCCAACAATTGCTAATACT
CAACAGAGACCATTTGACACTGTGCATTGTTTTGGTGGCAACGGTATCCAGCTTGCTGAA
TCTTCCTTATACTCATCGTCTAGTAGTGTAGCGCACAGTTTTTCATCAGGTAGCTTGGGG
CAGATGCAATATGAAAGTAGTACCACAGGTTCCTTCTGGTCACCACACAGAAGCCAACAA
CGTCTCCAGAGCAGGAGATCCCAATCACGAGAAGATCTCATTTCTTCACTGTCTACCGAA
GTGCCCTTGCCAAAGGTCTAA