Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400069866
CDS Infomation

pacid=37443467 polypeptide=PGSC0003DMP400047209 locus=PGSC0003DMG400027168 ID=PGSC0003DMT400069866.v4.03 annot-version=v4.03
Sequence

ATGGAGGCTATGAAAAGCATTGTGAACCCTTTGAGTTCTATCTGTTTTGTATGCATTTTG
CTTCTCTTTGCAAATGCAGCATCCGCGAAAACTCATTACCATGATTTTGTTATTCAAGCA
ACACCAGTGAAGAGGCTATGCAAAACTCACAACAGCATAACGGTGAATGGACAATTCCCT
GGTCCAACATTGGAAGTAAACAACGGGGATACTCTGGTGGTTAACGTTGTCAATAGAGCT
CGATATAATGTCACAATTCACTGGCACGGGGTTAGGCAAATGAGAACAGCATGGTCAGAT
GGACCAGAATTTATCACTCAATGCCCGATTAGACCAGGAAAGAGTTACACTTACCGGTTT
ACAATTCAAGGACAAGAAGGAACTCTTTGGTGGCACGCCCACAGCTCGTGGCTTAGGGCT
ACCGTTTATGGAGCTTTGATTATCCATCCAAAACAAGGCGAAAACTATCCATTTCCTAAG
CCCAAAAGAGAAACACCAGTTCTGCTTGGTGAGTGGTGGGATACAAATCCTATTGACGTT
GTAAGACGAGCAACAAGAACAGGAGCAGCTCCTAATGTATCTGATGCTTACACCATCAAT
GGTCAGCCAGGTGACCTCTACAAGTGTTCCAAACAAGATACAACCATAGTCCATATGGAC
TCTGGCGAAACCAACCTCCTTCGAGTTATCAATGCTGGATTGAATCAGCAGCTTTTCTTT
ACTGTGGCCAACCATAAGCTTACTGTTGTTGGAGCAGATGCCAATTATGTTAAACCTTTC
ACAACATCAGTCCTTATGCTCGGACCAGGACAGACAACCGATGTCCTGATCAAAGCTGAT
CAGACACCAAGCAGATACTACATGGCAGCACGTGCCTATGCAAGCGCTCAAGGCGCCCCC
TTTGATAATACCACAACCACAGCCATCCTCGAGTACAAAACAGCTTCTTGTTCTTCCAAT
TGTGCCAAGACTAAACCGGTTTCCCCGTCTTTACCAGCATATAATGACACAGCCACTGCG
ACAGCCTTCACAAGAAAATTCAGAAGCCCAAGAAAGGTCGAGGTACCCACTGAAATCGAT
GAAAATCTATTCATCACAGTCGGGCTGGGACTCGAGAACTGCCCAAGAGGTGCACGCTCT
AGAAACTGTCAAGGTCCAAATGGAACTCGATTCGCTGCCAGTATGAACAATGTATCTTTT
GTGCTACCATCCAATTTTTCCCTGCTACAAGCACATCACCAAGGCATACCTGGTGTTTTC
TCAACTGATTTCCCAGCTGTACCACCTGTAAAATTTAATTATACCGGCAACGTAAGCCGT
TCTTTATGGCAACCTATTCGAGGAACTAAGCTGTACAAGCTGAAATATGGGGCGACAGTA
CAAGTTGTGTTACAGGGGACGGGTATCTTCACAGCTGAGAATCACCCAATTCATCTTCAC
GGATATGATTTCTACATCATTGCAGAAGGATTTGGTAACTTTAATCCGAAAACAGATACA
TCTAAATTCAACCTTGTTAATCCACCTCTCAGAAATACAGCCAGTTTACCCGTTAACGGA
TGGACAGTCATCAGATTTGTCGCGGACAATCCAGGAGTGTGGATAATGCACTGTCATTTG
GATGTTCACATTACATGGGGTTTGGCGATGGCGTTCCTCGTGGAAAATGGAGTTAGTGAA
TTGGAATCATTGGAGTCTCCTCCCGTAGATTTTCCTGTCTGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400047209
PEP Infomation

pacid=37443467 transcript=PGSC0003DMT400069866 locus=PGSC0003DMG400027168 ID=PGSC0003DMT400069866.v4.03 annot-version=v4.03
Sequence

MEAMKSIVNPLSSICFVCILLLFANAASAKTHYHDFVIQATPVKRLCKTHNSITVNGQFP
GPTLEVNNGDTLVVNVVNRARYNVTIHWHGVRQMRTAWSDGPEFITQCPIRPGKSYTYRF
TIQGQEGTLWWHAHSSWLRATVYGALIIHPKQGENYPFPKPKRETPVLLGEWWDTNPIDV
VRRATRTGAAPNVSDAYTINGQPGDLYKCSKQDTTIVHMDSGETNLLRVINAGLNQQLFF
TVANHKLTVVGADANYVKPFTTSVLMLGPGQTTDVLIKADQTPSRYYMAARAYASAQGAP
FDNTTTTAILEYKTASCSSNCAKTKPVSPSLPAYNDTATATAFTRKFRSPRKVEVPTEID
ENLFITVGLGLENCPRGARSRNCQGPNGTRFAASMNNVSFVLPSNFSLLQAHHQGIPGVF
STDFPAVPPVKFNYTGNVSRSLWQPIRGTKLYKLKYGATVQVVLQGTGIFTAENHPIHLH
GYDFYIIAEGFGNFNPKTDTSKFNLVNPPLRNTASLPVNGWTVIRFVADNPGVWIMHCHL
DVHITWGLAMAFLVENGVSELESLESPPVDFPVC*

Transcript Sequence

Transcript ID

PGSC0003DMT400069866
Transcript Infomation

pacid=37443467 locus=PGSC0003DMG400027168 ID=PGSC0003DMT400069866.v4.03 annot-version=v4.03
Sequence

ATGGAGGCTATGAAAAGCATTGTGAACCCTTTGAGTTCTATCTGTTTTGTATGCATTTTG
CTTCTCTTTGCAAATGCAGCATCCGCGAAAACTCATTACCATGATTTTGTTATTCAAGCA
ACACCAGTGAAGAGGCTATGCAAAACTCACAACAGCATAACGGTGAATGGACAATTCCCT
GGTCCAACATTGGAAGTAAACAACGGGGATACTCTGGTGGTTAACGTTGTCAATAGAGCT
CGATATAATGTCACAATTCACTGGCACGGGGTTAGGCAAATGAGAACAGCATGGTCAGAT
GGACCAGAATTTATCACTCAATGCCCGATTAGACCAGGAAAGAGTTACACTTACCGGTTT
ACAATTCAAGGACAAGAAGGAACTCTTTGGTGGCACGCCCACAGCTCGTGGCTTAGGGCT
ACCGTTTATGGAGCTTTGATTATCCATCCAAAACAAGGCGAAAACTATCCATTTCCTAAG
CCCAAAAGAGAAACACCAGTTCTGCTTGGTGAGTGGTGGGATACAAATCCTATTGACGTT
GTAAGACGAGCAACAAGAACAGGAGCAGCTCCTAATGTATCTGATGCTTACACCATCAAT
GGTCAGCCAGGTGACCTCTACAAGTGTTCCAAACAAGATACAACCATAGTCCATATGGAC
TCTGGCGAAACCAACCTCCTTCGAGTTATCAATGCTGGATTGAATCAGCAGCTTTTCTTT
ACTGTGGCCAACCATAAGCTTACTGTTGTTGGAGCAGATGCCAATTATGTTAAACCTTTC
ACAACATCAGTCCTTATGCTCGGACCAGGACAGACAACCGATGTCCTGATCAAAGCTGAT
CAGACACCAAGCAGATACTACATGGCAGCACGTGCCTATGCAAGCGCTCAAGGCGCCCCC
TTTGATAATACCACAACCACAGCCATCCTCGAGTACAAAACAGCTTCTTGTTCTTCCAAT
TGTGCCAAGACTAAACCGGTTTCCCCGTCTTTACCAGCATATAATGACACAGCCACTGCG
ACAGCCTTCACAAGAAAATTCAGAAGCCCAAGAAAGGTCGAGGTACCCACTGAAATCGAT
GAAAATCTATTCATCACAGTCGGGCTGGGACTCGAGAACTGCCCAAGAGGTGCACGCTCT
AGAAACTGTCAAGGTCCAAATGGAACTCGATTCGCTGCCAGTATGAACAATGTATCTTTT
GTGCTACCATCCAATTTTTCCCTGCTACAAGCACATCACCAAGGCATACCTGGTGTTTTC
TCAACTGATTTCCCAGCTGTACCACCTGTAAAATTTAATTATACCGGCAACGTAAGCCGT
TCTTTATGGCAACCTATTCGAGGAACTAAGCTGTACAAGCTGAAATATGGGGCGACAGTA
CAAGTTGTGTTACAGGGGACGGGTATCTTCACAGCTGAGAATCACCCAATTCATCTTCAC
GGATATGATTTCTACATCATTGCAGAAGGATTTGGTAACTTTAATCCGAAAACAGATACA
TCTAAATTCAACCTTGTTAATCCACCTCTCAGAAATACAGCCAGTTTACCCGTTAACGGA
TGGACAGTCATCAGATTTGTCGCGGACAATCCAGGAGTGTGGATAATGCACTGTCATTTG
GATGTTCACATTACATGGGGTTTGGCGATGGCGTTCCTCGTGGAAAATGGAGTTAGTGAA
TTGGAATCATTGGAGTCTCCTCCCGTAGATTTTCCTGTCTGTTGA