Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400069859
CDS Infomation

pacid=37442954 polypeptide=PGSC0003DMP400047204 locus=PGSC0003DMG401027166 ID=PGSC0003DMT400069859.v4.03 annot-version=v4.03
Sequence

ATGCACAACCACCACCTTCAACCGCCGCCAACCACCACTTCCACCGGCGGCGCCACCGGA
AGTAACAACAGTAGCATTTGCCGGATCACTTTTTCGACACCCTTTATCCTCCTTATCACC
ACCATATTCTCACTTCTCCTTATACTTTCCCTTTCCTTTTCCCCTTCTTCTACCTCTCTT
CCTCCTCACCCTAATCCTTCCCTTTTCCCGAATTTCCATAACTATCTCAACTCCCCATCA
AACCCAAATGACCAAAATACCCTTCCATCCACCCCACCAACCCCACCTTCAATTGCATAC
CTCATATCTGGATCCACTAAAGACTCTTCTAGAATCCTCCGTTTGTTGTTTGCTGTGTAT
CATCCAAGAAATCAGTATTTACTTCATCTTGATAGAAAAGCTACTCAGAAGGAACGTGAT
GAATTGGCACTTGCTGTTCAATCTGTGCCGGTTTTTAAAGCTGCACAGAATGTAAATGTT
ATTGGGAAAGCTGATTTTCGATACTCGATTGGGTCTTCTGCATTGTCTGCTACACTTCAT
GGGGCTTCCATTCTTTTGAGACTTTCGAATTCTTGGGATTGGTTTATTAATCTCTCAGCT
GCTGATTATCCACTCGTTACTCAAGATGATCTTCTACACATTTTATCATATCTACCCAAG
GATCTTAATTTTGTCAACCACTCGAGCTACATCGGTTGGAGAGAGTCAAAGAAGTTGAAA
CCAATAGTTGTGGATCCAGGGCTCTATCTTGCAGAGGAAAGTGAAGTATATTATGCCACT
CAAAAACGGGAATTGCCAGATGCTTATCGATTATTCACAGGGTCATCATCTGCTATTTTG
AGTCGGAAGTTTACCGAGTTCTGCATCTTAGGCTCGGATAACCTCCCTAGAACTCTGTTA
ATGTACTTGTCAAACTCACCATCTTCAGAATCTGTATATTTTCCAACCGTTTTGTGCAAT
TCACGGAAATTCAATGGGACAACAATCAACCACAACATGCAGTATGCTTCTTTTAACTCC
AGATCACAAGTTCGCCGGCTCAACTCAAGTGACTTCAATGACCTGGTGATGAGTGGAGCA
GCCTTTGCTTCCCCATTTAAGGCAGGCGATCCGGTTCTTGATAAGATCGACCATGAACTT
CTCCACCACAATCGTGACGAACCAGTGCCAGGCGGGTGGTGTTTAGGTGACACTGAAACT
AACAAATGTACCGTTTGGGGAGATGCCGAAATCATAAGACCGGGTTTCGGAGCAAAGAGA
CTCGAGAAACATTTTCTTGAGCTTTTCTCTAACGGATCATATTTGTCTGATCAATGTCAA
TATGAGAAGACCTCCTCCTCCAGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400047204
PEP Infomation

pacid=37442954 transcript=PGSC0003DMT400069859 locus=PGSC0003DMG401027166 ID=PGSC0003DMT400069859.v4.03 annot-version=v4.03
Sequence

MHNHHLQPPPTTTSTGGATGSNNSSICRITFSTPFILLITTIFSLLLILSLSFSPSSTSL
PPHPNPSLFPNFHNYLNSPSNPNDQNTLPSTPPTPPSIAYLISGSTKDSSRILRLLFAVY
HPRNQYLLHLDRKATQKERDELALAVQSVPVFKAAQNVNVIGKADFRYSIGSSALSATLH
GASILLRLSNSWDWFINLSAADYPLVTQDDLLHILSYLPKDLNFVNHSSYIGWRESKKLK
PIVVDPGLYLAEESEVYYATQKRELPDAYRLFTGSSSAILSRKFTEFCILGSDNLPRTLL
MYLSNSPSSESVYFPTVLCNSRKFNGTTINHNMQYASFNSRSQVRRLNSSDFNDLVMSGA
AFASPFKAGDPVLDKIDHELLHHNRDEPVPGGWCLGDTETNKCTVWGDAEIIRPGFGAKR
LEKHFLELFSNGSYLSDQCQYEKTSSSR*

Transcript Sequence

Transcript ID

PGSC0003DMT400069859
Transcript Infomation

pacid=37442954 locus=PGSC0003DMG401027166 ID=PGSC0003DMT400069859.v4.03 annot-version=v4.03
Sequence

ATGCACAACCACCACCTTCAACCGCCGCCAACCACCACTTCCACCGGCGGCGCCACCGGA
AGTAACAACAGTAGCATTTGCCGGATCACTTTTTCGACACCCTTTATCCTCCTTATCACC
ACCATATTCTCACTTCTCCTTATACTTTCCCTTTCCTTTTCCCCTTCTTCTACCTCTCTT
CCTCCTCACCCTAATCCTTCCCTTTTCCCGAATTTCCATAACTATCTCAACTCCCCATCA
AACCCAAATGACCAAAATACCCTTCCATCCACCCCACCAACCCCACCTTCAATTGCATAC
CTCATATCTGGATCCACTAAAGACTCTTCTAGAATCCTCCGTTTGTTGTTTGCTGTGTAT
CATCCAAGAAATCAGTATTTACTTCATCTTGATAGAAAAGCTACTCAGAAGGAACGTGAT
GAATTGGCACTTGCTGTTCAATCTGTGCCGGTTTTTAAAGCTGCACAGAATGTAAATGTT
ATTGGGAAAGCTGATTTTCGATACTCGATTGGGTCTTCTGCATTGTCTGCTACACTTCAT
GGGGCTTCCATTCTTTTGAGACTTTCGAATTCTTGGGATTGGTTTATTAATCTCTCAGCT
GCTGATTATCCACTCGTTACTCAAGATGATCTTCTACACATTTTATCATATCTACCCAAG
GATCTTAATTTTGTCAACCACTCGAGCTACATCGGTTGGAGAGAGTCAAAGAAGTTGAAA
CCAATAGTTGTGGATCCAGGGCTCTATCTTGCAGAGGAAAGTGAAGTATATTATGCCACT
CAAAAACGGGAATTGCCAGATGCTTATCGATTATTCACAGGGTCATCATCTGCTATTTTG
AGTCGGAAGTTTACCGAGTTCTGCATCTTAGGCTCGGATAACCTCCCTAGAACTCTGTTA
ATGTACTTGTCAAACTCACCATCTTCAGAATCTGTATATTTTCCAACCGTTTTGTGCAAT
TCACGGAAATTCAATGGGACAACAATCAACCACAACATGCAGTATGCTTCTTTTAACTCC
AGATCACAAGTTCGCCGGCTCAACTCAAGTGACTTCAATGACCTGGTGATGAGTGGAGCA
GCCTTTGCTTCCCCATTTAAGGCAGGCGATCCGGTTCTTGATAAGATCGACCATGAACTT
CTCCACCACAATCGTGACGAACCAGTGCCAGGCGGGTGGTGTTTAGGTGACACTGAAACT
AACAAATGTACCGTTTGGGGAGATGCCGAAATCATAAGACCGGGTTTCGGAGCAAAGAGA
CTCGAGAAACATTTTCTTGAGCTTTTCTCTAACGGATCATATTTGTCTGATCAATGTCAA
TATGAGAAGACCTCCTCCTCCAGATGA