Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400069837
CDS Infomation

pacid=37441825 polypeptide=PGSC0003DMP400047190 locus=PGSC0003DMG400027154 ID=PGSC0003DMT400069837.v4.03 annot-version=v4.03
Sequence

ATGAAGAAGTATTTATTAATTAGAAAAGTGGGAAGGAAGAGATGGGCTGGATGTCTGCTT
ATTATTGGTCTTGCAATGGTTTTGTTGATTCGATATAGTAGTGTAGAAAAATCATACAGC
ATTGTAGAAAAATCAGACAGCAGTGTGGAAGAATCTCCGAAAAAGCAATCAGTTTATGGG
TTTTTCAATGACCATCCGGACATTAATGAAGGTTCAAAAGATGAAAATGCCAAGTTGTCT
GATCTGAAACCAGTAGAGCTAGTAAGTTTTAAGGAAAAACCACATCTTATTGATGTCGAA
GGGCTTAATGATCTATACAGCTTGAATAATTTTTCGACAGAAGAGTCTAAGGCATTGCTA
GCATGGGGCAAGATGAGATTGTTGTTGTCTAGATCAGATGGTTTGAATGGAACTGCTCAA
GGAGTTAAGGAGGCTGCTATATCATGGAAAGATTTGGTGTCGTTCATTGAGAAAAGTAAA
GTTCAAGATGAGAAGGAAAAACAGGATTGTCCTTATTCTGTGACTGCATTCAATACCGCG
ACGTTGAAGGACGGGAGCAGTCTTAGGATCCCTTGTGGCTTAGTTGAGGATTCATCTATT
ACTGTGATAGGCATACCTGATGCAAAACAAGAAGGTTTTCAAATTGAGCTGGTAGGTTCG
AAACTTCCAGAGGAAACAAATCCTCCTATAGTTTTGAATTATAATGTAATTTTACCCGGG
GAGAACTTGACAAAGGATCCCCTTATTACTCAAAATACATGGACTAATGAATCCGGGTGG
GGTAAGGTGGAAAAGTGCCCTGATCATGGCTCTACCGACGTGATAAAAGTTGATGGATTA
GTCAAATGCAATGCCAAAATTTTCCGAAATAATGTAGAAGAAACTGCAAATATGACCAAT
ACCAGCAATCCAAAGTCTTCAGATGTATCAAATTCTAGTGCCTACGGTACTGCCAACTAC
CCTTTTCTTGAAGGTAATCCATTTACTGCAACACTATGGGCTGGTATAGAGGGGTTCCAT
ATGACAGTCAACGGAAGACACGAGACGTCTTTTGCATATAGAGAGAAACTCGAACCTTGG
TTGGTTAGTGGAGTCAATGTGATAGGTGGTGTGGACACCATATCGATCTTAGCGAAAGGA
TTACCTGTGTCCAATGATTTTAACTTGGGTGATGATGTTGAGCACCTCAAAGCTCCATTA
ACTCGTAAAAAGAGACTTGTCATGTTAATTGGGATTTTCTCTACTGGAAACAATTTTGAG
AGACGTATGGCACTAAGGAAATCATGGATGCAATATGAAGCTGTGCGGTCAGGAGAAGTA
GCTGTCCGATTTTTTATTGGTCTTGACAAAAATAGGCAGGTCAATTTTGAGCTATGGAAG
GAAGCACAAGCCTATGGAGATATCCAATTATTGCCTTTTGTTGATTACTACAGCCTGCTC
ACTTTGAAGACCATAGCAATTTGCATTATGGGTGTTAAAATCCTACCTGCCAAATATGTT
ATGAAGACTGATGATGATGCTTTTGTAAGGATTGATGAAGTTCTATCTAGCCTCAAGGGA
AAGGATCCTAATGGTCTATTATATGGTGGAATATCTTTTGAGTCAGCACCCCACAGGGAT
AAAGAAAACAAGTGGTATATCAGTCCTGAGGAATATCCGCCTGCTTCCTATCCCCCATGG
GCACATGGACCAGGTTATATTATTTCTCGAGATATAGCTAAGTTCATTGTTCAGGGCCAT
CAAGAAATGGAACTGATGCTTTTTAAACTTGAGGATGTTGCTGTGGGCATTTGGATTGAG
GAATTCAGGAGGAAGGGTCACAAAATACAGTATGTTAACGATGAAAGGTTTTACAATGCC
GGTTGTGAATCAGGCTATATTCTTGCACATTATCAGAATTCGAGGATGGTACTATGTCTG
TGGGAGAAACTGCAGAAAGAACACGAACCAAACTGCTGCGAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400047190
PEP Infomation

pacid=37441825 transcript=PGSC0003DMT400069837 locus=PGSC0003DMG400027154 ID=PGSC0003DMT400069837.v4.03 annot-version=v4.03
Sequence

MKKYLLIRKVGRKRWAGCLLIIGLAMVLLIRYSSVEKSYSIVEKSDSSVEESPKKQSVYG
FFNDHPDINEGSKDENAKLSDLKPVELVSFKEKPHLIDVEGLNDLYSLNNFSTEESKALL
AWGKMRLLLSRSDGLNGTAQGVKEAAISWKDLVSFIEKSKVQDEKEKQDCPYSVTAFNTA
TLKDGSSLRIPCGLVEDSSITVIGIPDAKQEGFQIELVGSKLPEETNPPIVLNYNVILPG
ENLTKDPLITQNTWTNESGWGKVEKCPDHGSTDVIKVDGLVKCNAKIFRNNVEETANMTN
TSNPKSSDVSNSSAYGTANYPFLEGNPFTATLWAGIEGFHMTVNGRHETSFAYREKLEPW
LVSGVNVIGGVDTISILAKGLPVSNDFNLGDDVEHLKAPLTRKKRLVMLIGIFSTGNNFE
RRMALRKSWMQYEAVRSGEVAVRFFIGLDKNRQVNFELWKEAQAYGDIQLLPFVDYYSLL
TLKTIAICIMGVKILPAKYVMKTDDDAFVRIDEVLSSLKGKDPNGLLYGGISFESAPHRD
KENKWYISPEEYPPASYPPWAHGPGYIISRDIAKFIVQGHQEMELMLFKLEDVAVGIWIE
EFRRKGHKIQYVNDERFYNAGCESGYILAHYQNSRMVLCLWEKLQKEHEPNCCE*

Transcript Sequence

Transcript ID

PGSC0003DMT400069837
Transcript Infomation

pacid=37441825 locus=PGSC0003DMG400027154 ID=PGSC0003DMT400069837.v4.03 annot-version=v4.03
Sequence

ATGAAGAAGTATTTATTAATTAGAAAAGTGGGAAGGAAGAGATGGGCTGGATGTCTGCTT
ATTATTGGTCTTGCAATGGTTTTGTTGATTCGATATAGTAGTGTAGAAAAATCATACAGC
ATTGTAGAAAAATCAGACAGCAGTGTGGAAGAATCTCCGAAAAAGCAATCAGTTTATGGG
TTTTTCAATGACCATCCGGACATTAATGAAGGTTCAAAAGATGAAAATGCCAAGTTGTCT
GATCTGAAACCAGTAGAGCTAGTAAGTTTTAAGGAAAAACCACATCTTATTGATGTCGAA
GGGCTTAATGATCTATACAGCTTGAATAATTTTTCGACAGAAGAGTCTAAGGCATTGCTA
GCATGGGGCAAGATGAGATTGTTGTTGTCTAGATCAGATGGTTTGAATGGAACTGCTCAA
GGAGTTAAGGAGGCTGCTATATCATGGAAAGATTTGGTGTCGTTCATTGAGAAAAGTAAA
GTTCAAGATGAGAAGGAAAAACAGGATTGTCCTTATTCTGTGACTGCATTCAATACCGCG
ACGTTGAAGGACGGGAGCAGTCTTAGGATCCCTTGTGGCTTAGTTGAGGATTCATCTATT
ACTGTGATAGGCATACCTGATGCAAAACAAGAAGGTTTTCAAATTGAGCTGGTAGGTTCG
AAACTTCCAGAGGAAACAAATCCTCCTATAGTTTTGAATTATAATGTAATTTTACCCGGG
GAGAACTTGACAAAGGATCCCCTTATTACTCAAAATACATGGACTAATGAATCCGGGTGG
GGTAAGGTGGAAAAGTGCCCTGATCATGGCTCTACCGACGTGATAAAAGTTGATGGATTA
GTCAAATGCAATGCCAAAATTTTCCGAAATAATGTAGAAGAAACTGCAAATATGACCAAT
ACCAGCAATCCAAAGTCTTCAGATGTATCAAATTCTAGTGCCTACGGTACTGCCAACTAC
CCTTTTCTTGAAGGTAATCCATTTACTGCAACACTATGGGCTGGTATAGAGGGGTTCCAT
ATGACAGTCAACGGAAGACACGAGACGTCTTTTGCATATAGAGAGAAACTCGAACCTTGG
TTGGTTAGTGGAGTCAATGTGATAGGTGGTGTGGACACCATATCGATCTTAGCGAAAGGA
TTACCTGTGTCCAATGATTTTAACTTGGGTGATGATGTTGAGCACCTCAAAGCTCCATTA
ACTCGTAAAAAGAGACTTGTCATGTTAATTGGGATTTTCTCTACTGGAAACAATTTTGAG
AGACGTATGGCACTAAGGAAATCATGGATGCAATATGAAGCTGTGCGGTCAGGAGAAGTA
GCTGTCCGATTTTTTATTGGTCTTGACAAAAATAGGCAGGTCAATTTTGAGCTATGGAAG
GAAGCACAAGCCTATGGAGATATCCAATTATTGCCTTTTGTTGATTACTACAGCCTGCTC
ACTTTGAAGACCATAGCAATTTGCATTATGGGTGTTAAAATCCTACCTGCCAAATATGTT
ATGAAGACTGATGATGATGCTTTTGTAAGGATTGATGAAGTTCTATCTAGCCTCAAGGGA
AAGGATCCTAATGGTCTATTATATGGTGGAATATCTTTTGAGTCAGCACCCCACAGGGAT
AAAGAAAACAAGTGGTATATCAGTCCTGAGGAATATCCGCCTGCTTCCTATCCCCCATGG
GCACATGGACCAGGTTATATTATTTCTCGAGATATAGCTAAGTTCATTGTTCAGGGCCAT
CAAGAAATGGAACTGATGCTTTTTAAACTTGAGGATGTTGCTGTGGGCATTTGGATTGAG
GAATTCAGGAGGAAGGGTCACAAAATACAGTATGTTAACGATGAAAGGTTTTACAATGCC
GGTTGTGAATCAGGCTATATTCTTGCACATTATCAGAATTCGAGGATGGTACTATGTCTG
TGGGAGAAACTGCAGAAAGAACACGAACCAAACTGCTGCGAGTGA