Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400069740
CDS Infomation

pacid=37444989 polypeptide=PGSC0003DMP400047107 locus=PGSC0003DMG400027120 ID=PGSC0003DMT400069740.v4.03 annot-version=v4.03
Sequence

ATGTTGAATAACTCCATGAATGTTGCTCTGTTACTACTCATTCAACTTCTACTCATTGCA
ATTGCGGTACAGTACTCAACCGCTGATGAATCCTTCGATGTTCGTCAACATCTATCAACT
GTATCGAGGTATGGTATTGTGAAGGATATATCTGATGATTCCTTTGCTCCTTCCCAAAAT
CTCGATCAGTGTACACCTATTCATTTGAATCTTGTGGCGCGGCATGGCACTCGTGCTCCT
ACAAAGAAAAGGATCAGGGAGCTAGAAGCCTTTGCTGCTCGATTGGAAGTCCTTGTACGT
GATGTTAAGGAACAGAAGCAGTCTTTGGATAAAATTCCTGCTTGGTTAATGGGGTGGAAC
TCTCCTTGGAAGGGCAAACGTACAGGCGGAGAGTTGATCAGCGAAGGAGAAGACGAGTTA
TATCATCTTGGTATCAGAGTCAGAGAACAGTTTCCCAGCCTGTTTAGTGAAGAATACCAC
CCTGCTATATATTCAATCAAGACTACCCAGGTTCCTCGGGCATCAGCTAGCGCTGTGGCA
TTTGGCATGGGTCTGTTTAGTGGAAAAGGGAAGCTTGGACCAGGAGGTTATCGAGCTTTT
GCTGTTACAAGTGAAAGCCGTGCAAGTGATACAGTTTTGAGATTTCATGATTGTTGTCAA
AGCTACAAGGATTTTAGGAAAAGTCAGGAACCAACTGTAAAGAAGCTCAAAGAACCTGTA
TTAGATGAAATTACTCATGAACTAGTGAAGCAATACGGGCTTAATTTTACAAAACAGGAT
GTATCTTCTCTATGGTTTTTATGCAAACAGGAAGCTTCACTGTTGAACATCACCAATCAA
GCTTGCAGTCTATTCAGCCCAGCAGAGGTTTCTTTGCTGGAATGGGCCGACGATTTGGAG
TTATTCATACTAAAGGGCTATGGTAATTCACTAAATTACCGAATGGGAGTGCCGCTACTT
GAGGATGTAATTCAATCCATGGAACAGGCAATTAAGGCTAAAGAAGAAGGATATGCTCCC
GGGAGCTATGAAAAAGCAAGACTACGTTTTGCTCATGCAGAAACTCTGCTTCCTTTTTCA
TGCTTGATCGGACTCTTTCTTGAAGAATCTGAATTTGAACTAATACAAAGAGAGCAGACA
TTGCAATACCCTCCTAAGCCTCCTAAAACAAGAAACTGGCGGGGAAATATGGTGGCACCT
TTTGCTGGAAATAACATGCTAGTCCTTTACAGCTGTGTGTCAGACAACTCAAGCAAGTAT
TTTGTTAAAGTGCTGCACAATGAACGGCCCATTCCAATACCAGTAAGTTTTCTGATTCCA
GCATCCGTGGTCCTTGCTTTGGGATCATACATCAGTTATTACCGGTCTTCAAGGTTCTCC
CTTTACTTCTCATTTTTAACTTCTGAAAAAGGACTCACCGGCTGTGATGTCCTTACTTCC
AACTTAAAAGAGGTTTTGCCAACAGTGAAGTTACAAATTCATGAAAGTTCTCTGAAGTTG
CAACTTACTTTTTTGTCCCCGAACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400047107
PEP Infomation

pacid=37444989 transcript=PGSC0003DMT400069740 locus=PGSC0003DMG400027120 ID=PGSC0003DMT400069740.v4.03 annot-version=v4.03
Sequence

MLNNSMNVALLLLIQLLLIAIAVQYSTADESFDVRQHLSTVSRYGIVKDISDDSFAPSQN
LDQCTPIHLNLVARHGTRAPTKKRIRELEAFAARLEVLVRDVKEQKQSLDKIPAWLMGWN
SPWKGKRTGGELISEGEDELYHLGIRVREQFPSLFSEEYHPAIYSIKTTQVPRASASAVA
FGMGLFSGKGKLGPGGYRAFAVTSESRASDTVLRFHDCCQSYKDFRKSQEPTVKKLKEPV
LDEITHELVKQYGLNFTKQDVSSLWFLCKQEASLLNITNQACSLFSPAEVSLLEWADDLE
LFILKGYGNSLNYRMGVPLLEDVIQSMEQAIKAKEEGYAPGSYEKARLRFAHAETLLPFS
CLIGLFLEESEFELIQREQTLQYPPKPPKTRNWRGNMVAPFAGNNMLVLYSCVSDNSSKY
FVKVLHNERPIPIPVSFLIPASVVLALGSYISYYRSSRFSLYFSFLTSEKGLTGCDVLTS
NLKEVLPTVKLQIHESSLKLQLTFLSPN*

Transcript Sequence

Transcript ID

PGSC0003DMT400069740
Transcript Infomation

pacid=37444989 locus=PGSC0003DMG400027120 ID=PGSC0003DMT400069740.v4.03 annot-version=v4.03
Sequence

ATGTTGAATAACTCCATGAATGTTGCTCTGTTACTACTCATTCAACTTCTACTCATTGCA
ATTGCGGTACAGTACTCAACCGCTGATGAATCCTTCGATGTTCGTCAACATCTATCAACT
GTATCGAGGTATGGTATTGTGAAGGATATATCTGATGATTCCTTTGCTCCTTCCCAAAAT
CTCGATCAGTGTACACCTATTCATTTGAATCTTGTGGCGCGGCATGGCACTCGTGCTCCT
ACAAAGAAAAGGATCAGGGAGCTAGAAGCCTTTGCTGCTCGATTGGAAGTCCTTGTACGT
GATGTTAAGGAACAGAAGCAGTCTTTGGATAAAATTCCTGCTTGGTTAATGGGGTGGAAC
TCTCCTTGGAAGGGCAAACGTACAGGCGGAGAGTTGATCAGCGAAGGAGAAGACGAGTTA
TATCATCTTGGTATCAGAGTCAGAGAACAGTTTCCCAGCCTGTTTAGTGAAGAATACCAC
CCTGCTATATATTCAATCAAGACTACCCAGGTTCCTCGGGCATCAGCTAGCGCTGTGGCA
TTTGGCATGGGTCTGTTTAGTGGAAAAGGGAAGCTTGGACCAGGAGGTTATCGAGCTTTT
GCTGTTACAAGTGAAAGCCGTGCAAGTGATACAGTTTTGAGATTTCATGATTGTTGTCAA
AGCTACAAGGATTTTAGGAAAAGTCAGGAACCAACTGTAAAGAAGCTCAAAGAACCTGTA
TTAGATGAAATTACTCATGAACTAGTGAAGCAATACGGGCTTAATTTTACAAAACAGGAT
GTATCTTCTCTATGGTTTTTATGCAAACAGGAAGCTTCACTGTTGAACATCACCAATCAA
GCTTGCAGTCTATTCAGCCCAGCAGAGGTTTCTTTGCTGGAATGGGCCGACGATTTGGAG
TTATTCATACTAAAGGGCTATGGTAATTCACTAAATTACCGAATGGGAGTGCCGCTACTT
GAGGATGTAATTCAATCCATGGAACAGGCAATTAAGGCTAAAGAAGAAGGATATGCTCCC
GGGAGCTATGAAAAAGCAAGACTACGTTTTGCTCATGCAGAAACTCTGCTTCCTTTTTCA
TGCTTGATCGGACTCTTTCTTGAAGAATCTGAATTTGAACTAATACAAAGAGAGCAGACA
TTGCAATACCCTCCTAAGCCTCCTAAAACAAGAAACTGGCGGGGAAATATGGTGGCACCT
TTTGCTGGAAATAACATGCTAGTCCTTTACAGCTGTGTGTCAGACAACTCAAGCAAGTAT
TTTGTTAAAGTGCTGCACAATGAACGGCCCATTCCAATACCAGTAAGTTTTCTGATTCCA
GCATCCGTGGTCCTTGCTTTGGGATCATACATCAGTTATTACCGGTCTTCAAGGTTCTCC
CTTTACTTCTCATTTTTAACTTCTGAAAAAGGACTCACCGGCTGTGATGTCCTTACTTCC
AACTTAAAAGAGGTTTTGCCAACAGTGAAGTTACAAATTCATGAAAGTTCTCTGAAGTTG
CAACTTACTTTTTTGTCCCCGAACTAA