Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400069685
CDS Infomation

pacid=37451960 polypeptide=PGSC0003DMP400047063 locus=PGSC0003DMG400027090 ID=PGSC0003DMT400069685.v4.03 annot-version=v4.03
Sequence

ATGGCGTCTCAATCAGATTCTCCACCCAACTCAGTAAAAGAGAATACCCAGAATCCAGCA
ACAGCTTCGCAACCAGCAGCTGAAGATCATCAAGGTCCCAAGCCTGAGGCTGCAAGTGGG
AGCTCTCCAGCTTCTGTGTTTGTAAACTCGGAACCAATTCGGGAGGACCAAGTTCAGAAT
GCTATGAAATTTCTTTCACATCCGAAAGTTAGGGGATCTCCAGTCATGTATAGGCGTTCT
TTTCTTGAGAGGAAGGGGCTTACAAAGGAGGAAATTGACGAGGCCTTTCGTCGAGTTCCT
GATCCTACCCCAACTGTTACTAGCACACAGCCAGTTGCTGCTAATGAAGATGGGACACAG
AAGCCTTCATCGACTAGTACACCACAGGCTGCTTTACAAAATCTGCAGCCTGCATCAGCT
CCGAGCAATAGCATGACAAAAATGGGCTATCTCTCTCATTTCCATTGGACTCATGCAGTT
ATTGCTGTAGGTCTACTCGCTGCTTCAGGAGCTGGAACAGCTGTACTTTTCAAGAAATCT
ATTATTCCCCGGTTGAAGTCTTGGATACGCAAGGTTGTAATGGATGAAGAAGAAGATGAA
AAAGGTATTGTCAAGGGAAAACCAAGTTTAGCAGAAGAAGCTGCTGTTGCTGCAAAAGCT
GCTGCAGCTGCTGCTGCTGATGTTGCCCGAGCAAGCCAGGAGATGTTGGCATCAAAATCC
GAAGAGAAAAGGTATTTTGAGGAGCTGACAAGCCTGCTAAACTACCAAGTACGTGAGATG
AAATCAATGACAAGTGCTATAGAGAAACTGGAAGAGCAAAGTACTACTTCTGGAAGAATA
CCTGTTTCGGAACTAGATGATCGAAGAATTTCAGTTACTCAATCTAGGCAATCTTATGCT
AATGGAAAAGCAAATGGTGATGCACATTCAGTGAGATCTTTGTCACCACCTGCATCTGTT
GAACCATCTGCTGCACCCCATCCAAAGTCTTATATGGAGATTATGGCTATGGTTCAAAGA
GGAGAGAAGCCTTCCAACATCCGAGATATAAATGATCAGCCACCAAATCCTAACCAGCCT
GTACCTGATCGTGTTGCTGCAAAGCCTAAGCCTTGGGAAGTTGGCCAGAGTCAAAATAAT
TCCAATTTCCTTCAATCTCAAGGGAGTGGCGATGGCTTGAATTATGGTTACCAAGACAAT
CTGACGAATGGAGACAGTTCAGCACCTTGGTGGCAACGCAAGAATGCCAGGATAACTGAA
ATCGAAACTGAAGCTGAACAAAACTTTGGATCTCCAGCTGCACCAGTTCAGGAACGACCA
ATTCAGAGATCATGGGTTCCTCCCCAGCCTCCTCCAGTTGCAATGGCAGAAGCAGCTGCA
GCCATCCGCCAACCTAAAAAGTCTGCATCTCAGAACGAACAATTGACTGATGATCAGTTG
TTAGCTCGTTCATCAGATGAGTTGCAGAGGGTTACAAGAATCTCCGAATCTGGTGGTACC
CCTGAAGCTAATGGTTCGAGTTCTGGCCTACAGATGAGTGAGACAACACCAATTGGAGAA
GGTGATCAAACTTTCAGCAGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400047063
PEP Infomation

pacid=37451960 transcript=PGSC0003DMT400069685 locus=PGSC0003DMG400027090 ID=PGSC0003DMT400069685.v4.03 annot-version=v4.03
Sequence

MASQSDSPPNSVKENTQNPATASQPAAEDHQGPKPEAASGSSPASVFVNSEPIREDQVQN
AMKFLSHPKVRGSPVMYRRSFLERKGLTKEEIDEAFRRVPDPTPTVTSTQPVAANEDGTQ
KPSSTSTPQAALQNLQPASAPSNSMTKMGYLSHFHWTHAVIAVGLLAASGAGTAVLFKKS
IIPRLKSWIRKVVMDEEEDEKGIVKGKPSLAEEAAVAAKAAAAAAADVARASQEMLASKS
EEKRYFEELTSLLNYQVREMKSMTSAIEKLEEQSTTSGRIPVSELDDRRISVTQSRQSYA
NGKANGDAHSVRSLSPPASVEPSAAPHPKSYMEIMAMVQRGEKPSNIRDINDQPPNPNQP
VPDRVAAKPKPWEVGQSQNNSNFLQSQGSGDGLNYGYQDNLTNGDSSAPWWQRKNARITE
IETEAEQNFGSPAAPVQERPIQRSWVPPQPPPVAMAEAAAAIRQPKKSASQNEQLTDDQL
LARSSDELQRVTRISESGGTPEANGSSSGLQMSETTPIGEGDQTFSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400069685
Transcript Infomation

pacid=37451960 locus=PGSC0003DMG400027090 ID=PGSC0003DMT400069685.v4.03 annot-version=v4.03
Sequence

ATGGCGTCTCAATCAGATTCTCCACCCAACTCAGTAAAAGAGAATACCCAGAATCCAGCA
ACAGCTTCGCAACCAGCAGCTGAAGATCATCAAGGTCCCAAGCCTGAGGCTGCAAGTGGG
AGCTCTCCAGCTTCTGTGTTTGTAAACTCGGAACCAATTCGGGAGGACCAAGTTCAGAAT
GCTATGAAATTTCTTTCACATCCGAAAGTTAGGGGATCTCCAGTCATGTATAGGCGTTCT
TTTCTTGAGAGGAAGGGGCTTACAAAGGAGGAAATTGACGAGGCCTTTCGTCGAGTTCCT
GATCCTACCCCAACTGTTACTAGCACACAGCCAGTTGCTGCTAATGAAGATGGGACACAG
AAGCCTTCATCGACTAGTACACCACAGGCTGCTTTACAAAATCTGCAGCCTGCATCAGCT
CCGAGCAATAGCATGACAAAAATGGGCTATCTCTCTCATTTCCATTGGACTCATGCAGTT
ATTGCTGTAGGTCTACTCGCTGCTTCAGGAGCTGGAACAGCTGTACTTTTCAAGAAATCT
ATTATTCCCCGGTTGAAGTCTTGGATACGCAAGGTTGTAATGGATGAAGAAGAAGATGAA
AAAGGTATTGTCAAGGGAAAACCAAGTTTAGCAGAAGAAGCTGCTGTTGCTGCAAAAGCT
GCTGCAGCTGCTGCTGCTGATGTTGCCCGAGCAAGCCAGGAGATGTTGGCATCAAAATCC
GAAGAGAAAAGGTATTTTGAGGAGCTGACAAGCCTGCTAAACTACCAAGTACGTGAGATG
AAATCAATGACAAGTGCTATAGAGAAACTGGAAGAGCAAAGTACTACTTCTGGAAGAATA
CCTGTTTCGGAACTAGATGATCGAAGAATTTCAGTTACTCAATCTAGGCAATCTTATGCT
AATGGAAAAGCAAATGGTGATGCACATTCAGTGAGATCTTTGTCACCACCTGCATCTGTT
GAACCATCTGCTGCACCCCATCCAAAGTCTTATATGGAGATTATGGCTATGGTTCAAAGA
GGAGAGAAGCCTTCCAACATCCGAGATATAAATGATCAGCCACCAAATCCTAACCAGCCT
GTACCTGATCGTGTTGCTGCAAAGCCTAAGCCTTGGGAAGTTGGCCAGAGTCAAAATAAT
TCCAATTTCCTTCAATCTCAAGGGAGTGGCGATGGCTTGAATTATGGTTACCAAGACAAT
CTGACGAATGGAGACAGTTCAGCACCTTGGTGGCAACGCAAGAATGCCAGGATAACTGAA
ATCGAAACTGAAGCTGAACAAAACTTTGGATCTCCAGCTGCACCAGTTCAGGAACGACCA
ATTCAGAGATCATGGGTTCCTCCCCAGCCTCCTCCAGTTGCAATGGCAGAAGCAGCTGCA
GCCATCCGCCAACCTAAAAAGTCTGCATCTCAGAACGAACAATTGACTGATGATCAGTTG
TTAGCTCGTTCATCAGATGAGTTGCAGAGGGTTACAAGAATCTCCGAATCTGGTGGTACC
CCTGAAGCTAATGGTTCGAGTTCTGGCCTACAGATGAGTGAGACAACACCAATTGGAGAA
GGTGATCAAACTTTCAGCAGCTGA