Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400069678
CDS Infomation

pacid=37452683 polypeptide=PGSC0003DMP400047056 locus=PGSC0003DMG400027088 ID=PGSC0003DMT400069678.v4.03 annot-version=v4.03
Sequence

ATGGAAGAAACATTTGTTCCCCTACGTGGAATCAAGAATGATCTCAAGGGGAGATTGTTA
TGCTACAAGCAAGACTGGACTGGTGGTCTCCGTGCTGGTATCAGGATCTTAGCTCCAACG
ACCTACATTTTCTTTGCATCAGCAATTCCAGTTATTTCATTTGGGGAGCAACTGGAAAGA
AGCACCGATGGAAGTATAACTGCGGTGCAGACTCTTGTTTCAACAGCACTTTGTGGTGTA
ATCCATTCCATTCTTGGTGGACAGCCACTCCTTATACTAGGAGTAGCTGAGCCAACTGTC
TTGATGTACACTTTCATGTTCAACTTTGCGAAAGATCGGAAGGATTTGGGTCCGAATCTC
TTTCTAGCCTGGACAGGATGGGTTTGTGTTTGGACCGCCTTTCTGCTTTTCTTGCTAGCC
GTTCTGGGGGCGTGCTCCATAATAAACAGATTTACACGTCTGGCTGGTGAATTATTTGGC
ATGCTCATAGCAATGCTCTTTATGCAAGAGGCTATTAAGGGTTTGGTGGAGGAGTTTGGC
ATACCTCAAAGAGAAAATCCTCGTCAGGCTGCATTCTCACCTTCTTGGCGCTTTGGAAAT
GGAATGTTTGCACTAGTTTTATCTTTCGGGCTTCTTCTTACTGCACTGAGGAGCCGTAAA
GCTAGATCCTGGCGCTATGGATCAGGCTGGTTTCGAGGATTTATAGCTGACTATGGTGTC
CCACTAATGGTGCTTGTTTGGACGGCTGTATCTTACATACCAGCCCGTGATGTTCCACAA
GGGATACCACGGAGGCTTTTCAGCCCCAATCCATGGTCACCTGGAGCTTACTCAAATTGG
ACAGTTATCAAGGAAATGATGCATGTTCCTCCTCTATATATTGTCGGAGCGTTTATCCCA
GCCACAATGATTGCTGTCCTTTACTATTTCGATCACAGTGTTGCATCTCAACTTTCCCAA
CAAAAAGAGTTCAATCTAAAGAAACCTTCCTCGTATCATTATGACCTCCTTCTTTTGGGC
TTCTTGGTCATAATATGCGGTCTTCTTGGCATTCCTCCTTCAAATGGAGTCATTCCACAA
TCTCCAATGCACACAAAAAGCTTGGCCACTCTGAAACATCAGCTTTTACGGAATAAACTT
GCATCAACAGCGAGAAAAAACATTGATAAAAATGCAAATCTTGGTCAATTATATAGGAGC
ATGCAGGAAGCTTACAATGAGATGCAGACCCCCCTTGTGTATCAAACTCCTTCTGGCCTG
GGGTTGAAAGAGCTAAAAGAGGCCACAGTTCAACGGGCATCGAGTACCGGGTACATAGAT
GCACCAGTTGATGAGACAGTCTTTGATGTGGATAAGGATATTGATGAGCTCTTACCAGTA
GAAGTCAAAGAACAGCGTCTAAGTAATCTCCTTCAGGCGTTAATGGTTGGTGCTTGTGTG
GCTGCTATGCCTATCTTGAAAAGGATTCCTTCTTCTGTTCTCTGGGGATACTTTGCTTTC
ATGGCAATAGAGAGCTTGCCAGGAAATCAGTTTTGGGAGAGGATATTATTGCTTTTCACT
GCACCAGGTAGAAGATACAAGGTCTTGGAAGATAATCATGCAACATTTGTCGAGACGGTA
CCTTTCAAGACAATTGCCTGGTTCACCTTGTTTCAGACAGTTTATTTGCTCCTATGTTTC
GGCATCACATGGATACCAATAGCTGGTGTTCTTTTTCCTTTGTTGATCATGCTTCTAGTC
CCAGTGCGCCAGTATTTGCTTCCCAAGTTTTTCAAAGGAGCACATTTACAAGATCTAGAC
GCTGCAGAATATGAAGAAGCCCCTGCAATAGCATACAACATGTCCTATGGAGATCAAGAA
CCAGTCTGCATTGATGGTGGTGAGCTTCTTGATGATATGATCACAAGAAGCCGTGGGGAA
ATCCGGCGCTCATGCAGCCCAAGAGTAACGAGTTCAACTCCCACCTCCCTTGAGGAAATC
AAGTCAACACACAGCCCACAGCTATCTCAAAGGGCTTATAGTCCAAGAATCAATGTACTA
AGAGGAGAAAGAAGCCCCATATATGGCAAGGGACTTGAAATAAAGCAAACTCCCAGCCCT
CAGCCATCTAAACTTGGTCAAAATGATCGCGGTCCGTCTTCCACCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400047056
PEP Infomation

pacid=37452683 transcript=PGSC0003DMT400069678 locus=PGSC0003DMG400027088 ID=PGSC0003DMT400069678.v4.03 annot-version=v4.03
Sequence

MEETFVPLRGIKNDLKGRLLCYKQDWTGGLRAGIRILAPTTYIFFASAIPVISFGEQLER
STDGSITAVQTLVSTALCGVIHSILGGQPLLILGVAEPTVLMYTFMFNFAKDRKDLGPNL
FLAWTGWVCVWTAFLLFLLAVLGACSIINRFTRLAGELFGMLIAMLFMQEAIKGLVEEFG
IPQRENPRQAAFSPSWRFGNGMFALVLSFGLLLTALRSRKARSWRYGSGWFRGFIADYGV
PLMVLVWTAVSYIPARDVPQGIPRRLFSPNPWSPGAYSNWTVIKEMMHVPPLYIVGAFIP
ATMIAVLYYFDHSVASQLSQQKEFNLKKPSSYHYDLLLLGFLVIICGLLGIPPSNGVIPQ
SPMHTKSLATLKHQLLRNKLASTARKNIDKNANLGQLYRSMQEAYNEMQTPLVYQTPSGL
GLKELKEATVQRASSTGYIDAPVDETVFDVDKDIDELLPVEVKEQRLSNLLQALMVGACV
AAMPILKRIPSSVLWGYFAFMAIESLPGNQFWERILLLFTAPGRRYKVLEDNHATFVETV
PFKTIAWFTLFQTVYLLLCFGITWIPIAGVLFPLLIMLLVPVRQYLLPKFFKGAHLQDLD
AAEYEEAPAIAYNMSYGDQEPVCIDGGELLDDMITRSRGEIRRSCSPRVTSSTPTSLEEI
KSTHSPQLSQRAYSPRINVLRGERSPIYGKGLEIKQTPSPQPSKLGQNDRGPSST*

Transcript Sequence

Transcript ID

PGSC0003DMT400069678
Transcript Infomation

pacid=37452683 locus=PGSC0003DMG400027088 ID=PGSC0003DMT400069678.v4.03 annot-version=v4.03
Sequence

ATGGAAGAAACATTTGTTCCCCTACGTGGAATCAAGAATGATCTCAAGGGGAGATTGTTA
TGCTACAAGCAAGACTGGACTGGTGGTCTCCGTGCTGGTATCAGGATCTTAGCTCCAACG
ACCTACATTTTCTTTGCATCAGCAATTCCAGTTATTTCATTTGGGGAGCAACTGGAAAGA
AGCACCGATGGAAGTATAACTGCGGTGCAGACTCTTGTTTCAACAGCACTTTGTGGTGTA
ATCCATTCCATTCTTGGTGGACAGCCACTCCTTATACTAGGAGTAGCTGAGCCAACTGTC
TTGATGTACACTTTCATGTTCAACTTTGCGAAAGATCGGAAGGATTTGGGTCCGAATCTC
TTTCTAGCCTGGACAGGATGGGTTTGTGTTTGGACCGCCTTTCTGCTTTTCTTGCTAGCC
GTTCTGGGGGCGTGCTCCATAATAAACAGATTTACACGTCTGGCTGGTGAATTATTTGGC
ATGCTCATAGCAATGCTCTTTATGCAAGAGGCTATTAAGGGTTTGGTGGAGGAGTTTGGC
ATACCTCAAAGAGAAAATCCTCGTCAGGCTGCATTCTCACCTTCTTGGCGCTTTGGAAAT
GGAATGTTTGCACTAGTTTTATCTTTCGGGCTTCTTCTTACTGCACTGAGGAGCCGTAAA
GCTAGATCCTGGCGCTATGGATCAGGCTGGTTTCGAGGATTTATAGCTGACTATGGTGTC
CCACTAATGGTGCTTGTTTGGACGGCTGTATCTTACATACCAGCCCGTGATGTTCCACAA
GGGATACCACGGAGGCTTTTCAGCCCCAATCCATGGTCACCTGGAGCTTACTCAAATTGG
ACAGTTATCAAGGAAATGATGCATGTTCCTCCTCTATATATTGTCGGAGCGTTTATCCCA
GCCACAATGATTGCTGTCCTTTACTATTTCGATCACAGTGTTGCATCTCAACTTTCCCAA
CAAAAAGAGTTCAATCTAAAGAAACCTTCCTCGTATCATTATGACCTCCTTCTTTTGGGC
TTCTTGGTCATAATATGCGGTCTTCTTGGCATTCCTCCTTCAAATGGAGTCATTCCACAA
TCTCCAATGCACACAAAAAGCTTGGCCACTCTGAAACATCAGCTTTTACGGAATAAACTT
GCATCAACAGCGAGAAAAAACATTGATAAAAATGCAAATCTTGGTCAATTATATAGGAGC
ATGCAGGAAGCTTACAATGAGATGCAGACCCCCCTTGTGTATCAAACTCCTTCTGGCCTG
GGGTTGAAAGAGCTAAAAGAGGCCACAGTTCAACGGGCATCGAGTACCGGGTACATAGAT
GCACCAGTTGATGAGACAGTCTTTGATGTGGATAAGGATATTGATGAGCTCTTACCAGTA
GAAGTCAAAGAACAGCGTCTAAGTAATCTCCTTCAGGCGTTAATGGTTGGTGCTTGTGTG
GCTGCTATGCCTATCTTGAAAAGGATTCCTTCTTCTGTTCTCTGGGGATACTTTGCTTTC
ATGGCAATAGAGAGCTTGCCAGGAAATCAGTTTTGGGAGAGGATATTATTGCTTTTCACT
GCACCAGGTAGAAGATACAAGGTCTTGGAAGATAATCATGCAACATTTGTCGAGACGGTA
CCTTTCAAGACAATTGCCTGGTTCACCTTGTTTCAGACAGTTTATTTGCTCCTATGTTTC
GGCATCACATGGATACCAATAGCTGGTGTTCTTTTTCCTTTGTTGATCATGCTTCTAGTC
CCAGTGCGCCAGTATTTGCTTCCCAAGTTTTTCAAAGGAGCACATTTACAAGATCTAGAC
GCTGCAGAATATGAAGAAGCCCCTGCAATAGCATACAACATGTCCTATGGAGATCAAGAA
CCAGTCTGCATTGATGGTGGTGAGCTTCTTGATGATATGATCACAAGAAGCCGTGGGGAA
ATCCGGCGCTCATGCAGCCCAAGAGTAACGAGTTCAACTCCCACCTCCCTTGAGGAAATC
AAGTCAACACACAGCCCACAGCTATCTCAAAGGGCTTATAGTCCAAGAATCAATGTACTA
AGAGGAGAAAGAAGCCCCATATATGGCAAGGGACTTGAAATAAAGCAAACTCCCAGCCCT
CAGCCATCTAAACTTGGTCAAAATGATCGCGGTCCGTCTTCCACCTAG