Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400069667
CDS Infomation

pacid=37451295 polypeptide=PGSC0003DMP400047047 locus=PGSC0003DMG402027084 ID=PGSC0003DMT400069667.v4.03 annot-version=v4.03
Sequence

ATGGCTCTGTTTCAGTGCCGAATTCCATTTTCAGCAGTATCTCCATCTCTTTCACCAAGA
ACTGAATTTACAAAATTGTTTCTTGGAAATAGTAGTAACCCATTTGCTAAAACTACCCAA
AAGAAGTTTTCATCTCTTTGTTATGCTTTGAATGATTCCAATAAGCATTCATCCATATCC
ACATTTAGTGAGTTGATTGAGGCTTTAATTAGTGGGAAAGATTTGACTGAATCTGAATCA
GAAGATTCTCTTGATTTTTTGTTGGATGGTGCTGATGAAGCTTTGATTAGTGCTTTTCTT
GTTCTTCTGAGAGCTAAAGGAGAAACCTTTGAAGAAGTAGTGGGATTGGCAAGGGCAATG
ATAAAGCATTGCAGACGAGTTGAAGGTTTAGGTGACGCAGTTGATATTGTTGGGACAGGA
GGAGATGGAGCAAACACGGTGAATATCTCAACAGGTGCTTCAATTCTTGCTGCAGCTTGT
GGTGCGAAAGTAGCCAAGCAAGGGAGTAGATCCAGTTCATCCGCTTGTGGGAGCGCCGAT
GTATTGGAAGAACTAGGTGTTGCCATTGAGCTGGACCCTGAGGGGGTGAAAGAGTGTGTA
AATCAAGCTGGAATTGGTTTCATGATGTCTCCAATCTACCATCCGGCGATGAAGATTGTC
AGACCTATCAGGAAAAAGCTGAAAGTAAAGACGGTGTTCAACATCTTGGGACCTATGTTG
AACCCAGCAAGAGTGCCGTTTGCTGTAGTAGGAGTTTACAAAGAAGACCTGGTCCACAAA
ATGGCTAAAGCATTGCAAAGATTTGGCATGAAAAGAGCATTGGTTGTTCACTCAGAAGGC
CTAGATGAGATGAGTCCCCTTGGCCCTGGATTAGTCCTTGACGTCACACCAGATAATATT
GAGAAGTTCTCCTTTGATCCATTGGACTTTGGCATCCCTCGTTGCACTCTTGAAAGCCTT
CGAGGTGGAGGTCCAGAGTACAACGCCGAGATACTCAGACGTGTGCTGTCAGGAGAAAAA
GGGTCAATTGCTGATGCATTTGCACTAAATGCATCAGCTGCTCTCCTGGTAAGTGGACGC
GTTGATAATCTGGCTGAAGGAGTGGAATTAGCTCGTGAGACACTACTCTCTGGCAAAGCA
GTGAAAACACTTGATCTATGGATAGAAGTTTCCAATAAGGTGAAGGAAGCAGTCTGTGTG
AACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400047047
PEP Infomation

pacid=37451295 transcript=PGSC0003DMT400069667 locus=PGSC0003DMG402027084 ID=PGSC0003DMT400069667.v4.03 annot-version=v4.03
Sequence

MALFQCRIPFSAVSPSLSPRTEFTKLFLGNSSNPFAKTTQKKFSSLCYALNDSNKHSSIS
TFSELIEALISGKDLTESESEDSLDFLLDGADEALISAFLVLLRAKGETFEEVVGLARAM
IKHCRRVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSAD
VLEELGVAIELDPEGVKECVNQAGIGFMMSPIYHPAMKIVRPIRKKLKVKTVFNILGPML
NPARVPFAVVGVYKEDLVHKMAKALQRFGMKRALVVHSEGLDEMSPLGPGLVLDVTPDNI
EKFSFDPLDFGIPRCTLESLRGGGPEYNAEILRRVLSGEKGSIADAFALNASAALLVSGR
VDNLAEGVELARETLLSGKAVKTLDLWIEVSNKVKEAVCVN*

Transcript Sequence

Transcript ID

PGSC0003DMT400069667
Transcript Infomation

pacid=37451295 locus=PGSC0003DMG402027084 ID=PGSC0003DMT400069667.v4.03 annot-version=v4.03
Sequence

ATGGCTCTGTTTCAGTGCCGAATTCCATTTTCAGCAGTATCTCCATCTCTTTCACCAAGA
ACTGAATTTACAAAATTGTTTCTTGGAAATAGTAGTAACCCATTTGCTAAAACTACCCAA
AAGAAGTTTTCATCTCTTTGTTATGCTTTGAATGATTCCAATAAGCATTCATCCATATCC
ACATTTAGTGAGTTGATTGAGGCTTTAATTAGTGGGAAAGATTTGACTGAATCTGAATCA
GAAGATTCTCTTGATTTTTTGTTGGATGGTGCTGATGAAGCTTTGATTAGTGCTTTTCTT
GTTCTTCTGAGAGCTAAAGGAGAAACCTTTGAAGAAGTAGTGGGATTGGCAAGGGCAATG
ATAAAGCATTGCAGACGAGTTGAAGGTTTAGGTGACGCAGTTGATATTGTTGGGACAGGA
GGAGATGGAGCAAACACGGTGAATATCTCAACAGGTGCTTCAATTCTTGCTGCAGCTTGT
GGTGCGAAAGTAGCCAAGCAAGGGAGTAGATCCAGTTCATCCGCTTGTGGGAGCGCCGAT
GTATTGGAAGAACTAGGTGTTGCCATTGAGCTGGACCCTGAGGGGGTGAAAGAGTGTGTA
AATCAAGCTGGAATTGGTTTCATGATGTCTCCAATCTACCATCCGGCGATGAAGATTGTC
AGACCTATCAGGAAAAAGCTGAAAGTAAAGACGGTGTTCAACATCTTGGGACCTATGTTG
AACCCAGCAAGAGTGCCGTTTGCTGTAGTAGGAGTTTACAAAGAAGACCTGGTCCACAAA
ATGGCTAAAGCATTGCAAAGATTTGGCATGAAAAGAGCATTGGTTGTTCACTCAGAAGGC
CTAGATGAGATGAGTCCCCTTGGCCCTGGATTAGTCCTTGACGTCACACCAGATAATATT
GAGAAGTTCTCCTTTGATCCATTGGACTTTGGCATCCCTCGTTGCACTCTTGAAAGCCTT
CGAGGTGGAGGTCCAGAGTACAACGCCGAGATACTCAGACGTGTGCTGTCAGGAGAAAAA
GGGTCAATTGCTGATGCATTTGCACTAAATGCATCAGCTGCTCTCCTGGTAAGTGGACGC
GTTGATAATCTGGCTGAAGGAGTGGAATTAGCTCGTGAGACACTACTCTCTGGCAAAGCA
GTGAAAACACTTGATCTATGGATAGAAGTTTCCAATAAGGTGAAGGAAGCAGTCTGTGTG
AACTGA