Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400069639
CDS Infomation

pacid=37454209 polypeptide=PGSC0003DMP400047024 locus=PGSC0003DMG400027073 ID=PGSC0003DMT400069639.v4.03 annot-version=v4.03
Sequence

ATGGAATCTTCTATTGTGATCAAGGTCAAGTATGGAGAGACACTTAGACGATTCAATGCC
CGTGTTGCTGATGATAAACTTGGTCTTAACATAGATGAATTAAAAGACAAGATCTTTAAA
CTTTTCAACTTTCCTCCCGACAGTGAACTTACACTGACATACATTGATGAGGATGGTGAT
GTTGTAACACTTGTTGATGACGAAGATCTGCAGGATATCACGAGGCAGGACCTGGATCCC
CTGCGAATATCTGTGAACACTGAAAAACTTAGTAGATCTTCAGGTACATCTAGTGAAAAT
TCTACTTCCGTCAGGGCCCCACCTACATTTCCGAACATAAATTCGAGTGTTTCTGATCTT
CTCAAGTCATTGCCGAAATCAAAAAGCAAAAAAATCCTAAAGCACTCTGCAGATATGGCG
TCTAAAGCCTCATCAGCTGCCCGAGAAATTGCTGAGCTTTCCAAAGCTCTCTCTATGACT
GGCTTATCCTACTTAAAGCAGGCTTGTCCAGTATCCGGAGTCCCTATGGGTAGTGTTAGA
AGTGGAGAGCCATCTCAAGCAGCGAATCCTGAGGAGCTGACTGTTAAAACTGCAGGACAA
CCCAAAAGTCATACTGTATCCATAAATGCATCAGAATTGAAGTCTTCCCAATCAGATCAA
AACGGAATTCAGTGTGAACCATTATCAAAAAGTCCTAACCGTAACTCATCTCTGGTAGAC
GGTAAGAAGGAAGAGGGTAACAAATTTGGTGATTCCCATCTTGTTGGGAAGGCTCTTGGT
AATTCATATCCTAGTGCCTCAACCACTGGCCCAAAAAAGACAGCTGATAAACAGCAAACT
GAGAATCACCCTGGTGCTGAGCCTGTTGGTGTTGTTGGTTTATCTGGGAAGCTTTCTGGT
GGATTTAGATCTCCAAGTTCATATTTCATGACTATGGTGCCCGAGTTAAATGACACTATC
CAACCTCAATACTCTCCTTTCCAGATTCCAGTTAAAAGGAGCCATAATCACAGTGATGGG
ACAGTCTCTATTTTCCACAGAGGTGTTCGCTGTGATGGTTGTGGGGTTCATCCAATAACT
GGACCTAGGTTCAAATCTAAAGTAAAGGAGGACTATGATCTCTGCAGCATATGCTTTGCA
CGAATGGGAATTGATGCTGATTACATTAGAATGGATCGTCCTGTTTCTTACCATCATCCC
ATAGCTTTCAAGGCTTTACATGAACCTCGTGACATCTTTCAAGGCTGCGGTGTAAAATCG
CCTAAGCTGGACAGCCGCTTCAAACAGGATGTCAATGTACTTGATGGTACTATGATGGCT
CCATCGACTCCATTTACCAAGGTCTGGAGGATGAAGAACAATGGTAATATTGTCTGGCCA
CAAGGAACACAACTTGTTTGGATTGGGGGAGATCGATTAGGTGATGCAGTCTCTGTTGAA
TTACAGATTTCTTCGTTTGGCTTGGCTGTAGACCATGAACTTGATGTGGCAGTTGATTTT
ACAGCTCCTAAGCTTCCTGGCAGGTACATCTCCTACTGGAGGATGGCCTTGCCTTCAGGC
GAGAAGTTTGGGCAACGTGTATGGGTGCTTATCCAGGTTGATTTTTCAATGATCCCGAAA
AAGGAGTTCTTTTATGAAGCCTCTCAGGTCCTGGACTTGAATCTTCCTCCAGCCGGCTAT
GATATAGCTGGTTCTGAATCTATTAATGTGAATGCAGACATGACAATAGAGGATATCATT
GCTGACCCTAAAATCTCAAACCCTGCCATGGAATCAGTTGAACCGGTGGTTGATGGAAAC
CGTAACAATGAGGAATCCAAGTCGTGCATTTCTCCTTCTGCAGCTGGTTCGTCAATTTCA
TACCCCATTTATTTATCCAAGGCAGCACCAGCAGTTACTTCTGTTGCACCACCATCTGTT
GTAGAGGTGCAAGCATCTTCACAGGAAGATGTCGAGATGGCCCTCCTCAAGGAACTGGAG
GACATGGGTTTCACTCAGGTTAACTTAAACAAAGAAGTCTTGAGGATGAACGAGTATAAC
TTGGAACAAGCAGTAGCTGATCTTTGTGGTGTTTCTGAGTGGGATCCTATGCTTGAAGAG
CTGGAGGAGATGGGTTTCCACAACAAAGAGATGAACAAGGAGTTGCTCAAGAAGAACAAT
GGCAGCATTAAGCGTGTTGTGATGGATCTTATTGCTGGAGAGAATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400047024
PEP Infomation

pacid=37454209 transcript=PGSC0003DMT400069639 locus=PGSC0003DMG400027073 ID=PGSC0003DMT400069639.v4.03 annot-version=v4.03
Sequence

MESSIVIKVKYGETLRRFNARVADDKLGLNIDELKDKIFKLFNFPPDSELTLTYIDEDGD
VVTLVDDEDLQDITRQDLDPLRISVNTEKLSRSSGTSSENSTSVRAPPTFPNINSSVSDL
LKSLPKSKSKKILKHSADMASKASSAAREIAELSKALSMTGLSYLKQACPVSGVPMGSVR
SGEPSQAANPEELTVKTAGQPKSHTVSINASELKSSQSDQNGIQCEPLSKSPNRNSSLVD
GKKEEGNKFGDSHLVGKALGNSYPSASTTGPKKTADKQQTENHPGAEPVGVVGLSGKLSG
GFRSPSSYFMTMVPELNDTIQPQYSPFQIPVKRSHNHSDGTVSIFHRGVRCDGCGVHPIT
GPRFKSKVKEDYDLCSICFARMGIDADYIRMDRPVSYHHPIAFKALHEPRDIFQGCGVKS
PKLDSRFKQDVNVLDGTMMAPSTPFTKVWRMKNNGNIVWPQGTQLVWIGGDRLGDAVSVE
LQISSFGLAVDHELDVAVDFTAPKLPGRYISYWRMALPSGEKFGQRVWVLIQVDFSMIPK
KEFFYEASQVLDLNLPPAGYDIAGSESINVNADMTIEDIIADPKISNPAMESVEPVVDGN
RNNEESKSCISPSAAGSSISYPIYLSKAAPAVTSVAPPSVVEVQASSQEDVEMALLKELE
DMGFTQVNLNKEVLRMNEYNLEQAVADLCGVSEWDPMLEELEEMGFHNKEMNKELLKKNN
GSIKRVVMDLIAGEN*

Transcript Sequence

Transcript ID

PGSC0003DMT400069639
Transcript Infomation

pacid=37454209 locus=PGSC0003DMG400027073 ID=PGSC0003DMT400069639.v4.03 annot-version=v4.03
Sequence

ATGGAATCTTCTATTGTGATCAAGGTCAAGTATGGAGAGACACTTAGACGATTCAATGCC
CGTGTTGCTGATGATAAACTTGGTCTTAACATAGATGAATTAAAAGACAAGATCTTTAAA
CTTTTCAACTTTCCTCCCGACAGTGAACTTACACTGACATACATTGATGAGGATGGTGAT
GTTGTAACACTTGTTGATGACGAAGATCTGCAGGATATCACGAGGCAGGACCTGGATCCC
CTGCGAATATCTGTGAACACTGAAAAACTTAGTAGATCTTCAGGTACATCTAGTGAAAAT
TCTACTTCCGTCAGGGCCCCACCTACATTTCCGAACATAAATTCGAGTGTTTCTGATCTT
CTCAAGTCATTGCCGAAATCAAAAAGCAAAAAAATCCTAAAGCACTCTGCAGATATGGCG
TCTAAAGCCTCATCAGCTGCCCGAGAAATTGCTGAGCTTTCCAAAGCTCTCTCTATGACT
GGCTTATCCTACTTAAAGCAGGCTTGTCCAGTATCCGGAGTCCCTATGGGTAGTGTTAGA
AGTGGAGAGCCATCTCAAGCAGCGAATCCTGAGGAGCTGACTGTTAAAACTGCAGGACAA
CCCAAAAGTCATACTGTATCCATAAATGCATCAGAATTGAAGTCTTCCCAATCAGATCAA
AACGGAATTCAGTGTGAACCATTATCAAAAAGTCCTAACCGTAACTCATCTCTGGTAGAC
GGTAAGAAGGAAGAGGGTAACAAATTTGGTGATTCCCATCTTGTTGGGAAGGCTCTTGGT
AATTCATATCCTAGTGCCTCAACCACTGGCCCAAAAAAGACAGCTGATAAACAGCAAACT
GAGAATCACCCTGGTGCTGAGCCTGTTGGTGTTGTTGGTTTATCTGGGAAGCTTTCTGGT
GGATTTAGATCTCCAAGTTCATATTTCATGACTATGGTGCCCGAGTTAAATGACACTATC
CAACCTCAATACTCTCCTTTCCAGATTCCAGTTAAAAGGAGCCATAATCACAGTGATGGG
ACAGTCTCTATTTTCCACAGAGGTGTTCGCTGTGATGGTTGTGGGGTTCATCCAATAACT
GGACCTAGGTTCAAATCTAAAGTAAAGGAGGACTATGATCTCTGCAGCATATGCTTTGCA
CGAATGGGAATTGATGCTGATTACATTAGAATGGATCGTCCTGTTTCTTACCATCATCCC
ATAGCTTTCAAGGCTTTACATGAACCTCGTGACATCTTTCAAGGCTGCGGTGTAAAATCG
CCTAAGCTGGACAGCCGCTTCAAACAGGATGTCAATGTACTTGATGGTACTATGATGGCT
CCATCGACTCCATTTACCAAGGTCTGGAGGATGAAGAACAATGGTAATATTGTCTGGCCA
CAAGGAACACAACTTGTTTGGATTGGGGGAGATCGATTAGGTGATGCAGTCTCTGTTGAA
TTACAGATTTCTTCGTTTGGCTTGGCTGTAGACCATGAACTTGATGTGGCAGTTGATTTT
ACAGCTCCTAAGCTTCCTGGCAGGTACATCTCCTACTGGAGGATGGCCTTGCCTTCAGGC
GAGAAGTTTGGGCAACGTGTATGGGTGCTTATCCAGGTTGATTTTTCAATGATCCCGAAA
AAGGAGTTCTTTTATGAAGCCTCTCAGGTCCTGGACTTGAATCTTCCTCCAGCCGGCTAT
GATATAGCTGGTTCTGAATCTATTAATGTGAATGCAGACATGACAATAGAGGATATCATT
GCTGACCCTAAAATCTCAAACCCTGCCATGGAATCAGTTGAACCGGTGGTTGATGGAAAC
CGTAACAATGAGGAATCCAAGTCGTGCATTTCTCCTTCTGCAGCTGGTTCGTCAATTTCA
TACCCCATTTATTTATCCAAGGCAGCACCAGCAGTTACTTCTGTTGCACCACCATCTGTT
GTAGAGGTGCAAGCATCTTCACAGGAAGATGTCGAGATGGCCCTCCTCAAGGAACTGGAG
GACATGGGTTTCACTCAGGTTAACTTAAACAAAGAAGTCTTGAGGATGAACGAGTATAAC
TTGGAACAAGCAGTAGCTGATCTTTGTGGTGTTTCTGAGTGGGATCCTATGCTTGAAGAG
CTGGAGGAGATGGGTTTCCACAACAAAGAGATGAACAAGGAGTTGCTCAAGAAGAACAAT
GGCAGCATTAAGCGTGTTGTGATGGATCTTATTGCTGGAGAGAATTAG