Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400069631
CDS Infomation

pacid=37454257 polypeptide=PGSC0003DMP400047016 locus=PGSC0003DMG400027069 ID=PGSC0003DMT400069631.v4.03 annot-version=v4.03
Sequence

ATGTCAGAAATTCCGGCGTCCAACTCCGTCAAAATTCCTTCAATGAAGTCAGAATGTCCC
GGCGTCGATAGGACCTCCGGAAACTTGAGGTTACAGCCACCACTTCAGTATCAGCCGTCG
AAAATCGTTTTGGCTGACCTCAACGTTGACCCTCCTGATTCCGACGGCAATGATTCAGTA
CCCGTCGCTGCTCTATCTCCTGCATGTATATCCAGGGTAATAGCTGATGAAATTTGTCAG
GATAAGCTGAAGAAAGACATAGAGATTGCAGAAACAGAAGGTAAACAATTGAAAAAATTG
GGAAAATGCCGTTCAAGAATGGGTAAGTTAGACTGTCCTCCTGATTGTAATGGAGCTGAT
GCAGAGGCTGATCATAATGTTCACGGGGTCCCTTCATCTCGGGAAGAAAAAGTTAGCAGT
CTTAAAACTGGCTTGATACATGTTGCACGAAAAATGCCAAAGAATGCACATGCACATTTT
GTACTTGGCTTGATGTATCAAAGGATGGGTCAACCTCAAAAGGCGATTCTGGCATATGAG
AAATCGGAAGAAATTTTAGTTCGCTCTGAGGAAGCAATAGACAGGCCTGAGTTGCTTTCT
TTAGTCCAGGTTCATCATGCACAGTGTATTCTGCTTGGAACCTTGGAAGATTGTAGTTCA
GATGAGGAATTAGACCCTGAAGAGCTTGAAAATATTCTTGCTAAACTTAAGGAGGCTGTG
AAAGCTGATGTTAGGCAGGCATCTATTTGGAATGCTCTTGGCATAATACTTCTTAGATCG
GGTCGTTTGCAGAGTGCTATATCAGTTTTCTCAACTTTGTTGGAGATTTCCCCAGACAAC
TTGGATTGCCTCGGTAATCTTGGAATTGCTTGTCTCCAGAGTGGGAATCTAGAGCTTTCG
GAAAAGTGCTTCCAAGATCTACTTCTAAAAGATCAGAACCATCCCACGGCATTAATCAAC
TATGCTGCCCTTATCTTATATAAATATGGTTCAGTAGTGGCAGGTGCGGGGGCAAATACT
CTTTATGGAACTTCTGCAGATCAAGTCACTGCAGCCAATGTTGCCAAAGAGTGTTTACTA
GCAGCTTTAAAAGCAGACTCGAAAGCAGCTCACATTTGGACAAATCTAGCTAATGCTTAT
TACTTGATGGGTGATCATAGGAGCTCTGCTAAATGCTTGGAAAAGGCAGGAAAAATTGAT
CCTAATTGTTTAGCGACAAGATATGCGGTTGGAGTTCACCGCATCAGGGATGCAGAGAGG
TCCCAGAATCCCAATGAGCAGCTCTCATGGGCTGGTAGTGAGATGGCCTCAATACTAAGA
GAAGGAGATTCTACTTCGATAGAGCCTCCAATAGCATGGGCTGGTCTCGCCATGGTCCAC
AGGGCCCAACATGAAATTGTGGCAGGATTTGAAATTGAGCATAATGAATTGGTGGAAGTC
AAGGAGCATGCTATCTACAGTCTAAAGCAGGCAATAGCCGAAGATCCTGCTGATGCTGTT
CAATGGCATCAGCTTGGCCTTCATAGTCTGTGTACCCAACAATTTAAGACGTCTCAAATG
TACCTCAAGGCTGCAGTTGCACGCCGTAAGGACTGCACCTATGCCTGGTCAAATCTTGGT
AAATGCATCTCTCTTACACAATGTCATGCACATCTTTTTTCCTCCTCTTTTCTTCTCCAT
ATTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400047016
PEP Infomation

pacid=37454257 transcript=PGSC0003DMT400069631 locus=PGSC0003DMG400027069 ID=PGSC0003DMT400069631.v4.03 annot-version=v4.03
Sequence

MSEIPASNSVKIPSMKSECPGVDRTSGNLRLQPPLQYQPSKIVLADLNVDPPDSDGNDSV
PVAALSPACISRVIADEICQDKLKKDIEIAETEGKQLKKLGKCRSRMGKLDCPPDCNGAD
AEADHNVHGVPSSREEKVSSLKTGLIHVARKMPKNAHAHFVLGLMYQRMGQPQKAILAYE
KSEEILVRSEEAIDRPELLSLVQVHHAQCILLGTLEDCSSDEELDPEELENILAKLKEAV
KADVRQASIWNALGIILLRSGRLQSAISVFSTLLEISPDNLDCLGNLGIACLQSGNLELS
EKCFQDLLLKDQNHPTALINYAALILYKYGSVVAGAGANTLYGTSADQVTAANVAKECLL
AALKADSKAAHIWTNLANAYYLMGDHRSSAKCLEKAGKIDPNCLATRYAVGVHRIRDAER
SQNPNEQLSWAGSEMASILREGDSTSIEPPIAWAGLAMVHRAQHEIVAGFEIEHNELVEV
KEHAIYSLKQAIAEDPADAVQWHQLGLHSLCTQQFKTSQMYLKAAVARRKDCTYAWSNLG
KCISLTQCHAHLFSSSFLLHI*

Transcript Sequence

Transcript ID

PGSC0003DMT400069631
Transcript Infomation

pacid=37454257 locus=PGSC0003DMG400027069 ID=PGSC0003DMT400069631.v4.03 annot-version=v4.03
Sequence

ATGTCAGAAATTCCGGCGTCCAACTCCGTCAAAATTCCTTCAATGAAGTCAGAATGTCCC
GGCGTCGATAGGACCTCCGGAAACTTGAGGTTACAGCCACCACTTCAGTATCAGCCGTCG
AAAATCGTTTTGGCTGACCTCAACGTTGACCCTCCTGATTCCGACGGCAATGATTCAGTA
CCCGTCGCTGCTCTATCTCCTGCATGTATATCCAGGGTAATAGCTGATGAAATTTGTCAG
GATAAGCTGAAGAAAGACATAGAGATTGCAGAAACAGAAGGTAAACAATTGAAAAAATTG
GGAAAATGCCGTTCAAGAATGGGTAAGTTAGACTGTCCTCCTGATTGTAATGGAGCTGAT
GCAGAGGCTGATCATAATGTTCACGGGGTCCCTTCATCTCGGGAAGAAAAAGTTAGCAGT
CTTAAAACTGGCTTGATACATGTTGCACGAAAAATGCCAAAGAATGCACATGCACATTTT
GTACTTGGCTTGATGTATCAAAGGATGGGTCAACCTCAAAAGGCGATTCTGGCATATGAG
AAATCGGAAGAAATTTTAGTTCGCTCTGAGGAAGCAATAGACAGGCCTGAGTTGCTTTCT
TTAGTCCAGGTTCATCATGCACAGTGTATTCTGCTTGGAACCTTGGAAGATTGTAGTTCA
GATGAGGAATTAGACCCTGAAGAGCTTGAAAATATTCTTGCTAAACTTAAGGAGGCTGTG
AAAGCTGATGTTAGGCAGGCATCTATTTGGAATGCTCTTGGCATAATACTTCTTAGATCG
GGTCGTTTGCAGAGTGCTATATCAGTTTTCTCAACTTTGTTGGAGATTTCCCCAGACAAC
TTGGATTGCCTCGGTAATCTTGGAATTGCTTGTCTCCAGAGTGGGAATCTAGAGCTTTCG
GAAAAGTGCTTCCAAGATCTACTTCTAAAAGATCAGAACCATCCCACGGCATTAATCAAC
TATGCTGCCCTTATCTTATATAAATATGGTTCAGTAGTGGCAGGTGCGGGGGCAAATACT
CTTTATGGAACTTCTGCAGATCAAGTCACTGCAGCCAATGTTGCCAAAGAGTGTTTACTA
GCAGCTTTAAAAGCAGACTCGAAAGCAGCTCACATTTGGACAAATCTAGCTAATGCTTAT
TACTTGATGGGTGATCATAGGAGCTCTGCTAAATGCTTGGAAAAGGCAGGAAAAATTGAT
CCTAATTGTTTAGCGACAAGATATGCGGTTGGAGTTCACCGCATCAGGGATGCAGAGAGG
TCCCAGAATCCCAATGAGCAGCTCTCATGGGCTGGTAGTGAGATGGCCTCAATACTAAGA
GAAGGAGATTCTACTTCGATAGAGCCTCCAATAGCATGGGCTGGTCTCGCCATGGTCCAC
AGGGCCCAACATGAAATTGTGGCAGGATTTGAAATTGAGCATAATGAATTGGTGGAAGTC
AAGGAGCATGCTATCTACAGTCTAAAGCAGGCAATAGCCGAAGATCCTGCTGATGCTGTT
CAATGGCATCAGCTTGGCCTTCATAGTCTGTGTACCCAACAATTTAAGACGTCTCAAATG
TACCTCAAGGCTGCAGTTGCACGCCGTAAGGACTGCACCTATGCCTGGTCAAATCTTGGT
AAATGCATCTCTCTTACACAATGTCATGCACATCTTTTTTCCTCCTCTTTTCTTCTCCAT
ATTTAA