Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400069555
CDS Infomation

pacid=37449909 polypeptide=PGSC0003DMP400046954 locus=PGSC0003DMG400027038 ID=PGSC0003DMT400069555.v4.03 annot-version=v4.03
Sequence

ATGGCCATTGCTGCAGTTATCGGACTCTATGCAGGAAATAGAATCCTAAGCTCGTCCTTT
TATTATTCTGATCTTACTGAAAAGTTAGCTTGTAGTGGTGATCATGCTTTGATCTGCAAT
CCTACTTGGAATGTGATCAATGCTAAGAAGTCATCCAATTATAGCACCGGTTATGTTTCC
AATCGAAAAAAACAATCTGTTAAGGCTGTTAAAGAGCATGTGAACATTGCATCTAATCAT
TCTGATGTGGAGCCAATGGTTGAAATGTTCAAAAAGCTGCAGAATGAAAGCTTCAGTGAA
GAAGATTCAGTGGAGGTTCTTCTTCTGCTGCAGAAATCTATGCTAGAAAAACAATGGAAT
CTTTCAGCTGAGAAAACATTGGCAGCTTTTCCACCAAATGAAAAGAACTGTAAAAAGAAG
ATGCAGATCACTTGTTCAGGGACTTCTGCTAGGCGGAGGAGAATGGATACTCGTAAAAGG
GTTCAAATTCCAAAAACTTCAGCTGCAGCAAATAGTGCAAGCAAGCGACTGAGATCTGTT
GTCGGTCCAGAGCTACAACAAAACCGTTTGAGAGGTTACATGAAAGGTGTCGTAAACCAA
GAACTGCTTACACATAAGGAAGTGGTGCAACTATCCAAGAAAATCAAATTTGGTCTTTAC
TTAGAAGAACAGAAGGCCAGTCTGAAGGAAAGATTGGGATGTGAACCTTCTGACGATCAA
CTCGCGGTTTCCTTGAAGATGTCTCTTGCTGATTTACGATCTACATTAATGGAGTGTTCC
TTGGCTAGAGAAAAACTTGCAATGAGCAATGTTCGTCTCGTCATGTCAATTGCACAAAGA
TATGATAGCATGGGTACTGAAATGGCTGACCTCATTCAGGGGGGCCTTATTGGACTACTT
CGTGGGATAGAGAAATTTGATCACTCAAGAGGATTCAAAATCTCAACTTATGTTTATTGG
TGGATTCGTCAGGGCGTCTCCCGAGCATTAGTTGATAACTCAAGAACCTTAAGATTGCCC
ATACATCTACATGAAAGACTGAGTTTGATCCGTAATGCAAAAGTCAAGCTTAAAGATAAT
GGAATAACTCCATCAATCGAAAAAATAGCTGAATGCCTTAACATGTCCCAGAAGAAAGTC
AGGAATGCAACTGAGGCAAGCAGCAAGGTGTTTTCACTTGATAGGGAAGCATATCCCTCT
TTAAATGGCCTTCCTGGAGCAACACTTCATAGCTACATTGCTGATAATCGCCTGGAGAAC
AACCCGTGGCATGGAGTTGATGGATGGGCGCTCAAGGATGAAGTAAACAACCTCATTTCT
TCAACTCTTAGGGAACGCGAGAGAGATATTGTCCGACTGTACTATGGTCTGGACAATGAG
TGCCTTACCTGGGAGGATATTAGTAGAAGGATAGGTTTGTCCAGAGAAAGAGTGAGGCAG
GTTGGATTAGTTGCACTTGAGAAATTAAAACATGCTGCCAGGAAAAAGCAATTAGATGCA
ATGTTGGTTAAACATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400046954
PEP Infomation

pacid=37449909 transcript=PGSC0003DMT400069555 locus=PGSC0003DMG400027038 ID=PGSC0003DMT400069555.v4.03 annot-version=v4.03
Sequence

MAIAAVIGLYAGNRILSSSFYYSDLTEKLACSGDHALICNPTWNVINAKKSSNYSTGYVS
NRKKQSVKAVKEHVNIASNHSDVEPMVEMFKKLQNESFSEEDSVEVLLLLQKSMLEKQWN
LSAEKTLAAFPPNEKNCKKKMQITCSGTSARRRRMDTRKRVQIPKTSAAANSASKRLRSV
VGPELQQNRLRGYMKGVVNQELLTHKEVVQLSKKIKFGLYLEEQKASLKERLGCEPSDDQ
LAVSLKMSLADLRSTLMECSLAREKLAMSNVRLVMSIAQRYDSMGTEMADLIQGGLIGLL
RGIEKFDHSRGFKISTYVYWWIRQGVSRALVDNSRTLRLPIHLHERLSLIRNAKVKLKDN
GITPSIEKIAECLNMSQKKVRNATEASSKVFSLDREAYPSLNGLPGATLHSYIADNRLEN
NPWHGVDGWALKDEVNNLISSTLRERERDIVRLYYGLDNECLTWEDISRRIGLSRERVRQ
VGLVALEKLKHAARKKQLDAMLVKH*

Transcript Sequence

Transcript ID

PGSC0003DMT400069555
Transcript Infomation

pacid=37449909 locus=PGSC0003DMG400027038 ID=PGSC0003DMT400069555.v4.03 annot-version=v4.03
Sequence

ATGGCCATTGCTGCAGTTATCGGACTCTATGCAGGAAATAGAATCCTAAGCTCGTCCTTT
TATTATTCTGATCTTACTGAAAAGTTAGCTTGTAGTGGTGATCATGCTTTGATCTGCAAT
CCTACTTGGAATGTGATCAATGCTAAGAAGTCATCCAATTATAGCACCGGTTATGTTTCC
AATCGAAAAAAACAATCTGTTAAGGCTGTTAAAGAGCATGTGAACATTGCATCTAATCAT
TCTGATGTGGAGCCAATGGTTGAAATGTTCAAAAAGCTGCAGAATGAAAGCTTCAGTGAA
GAAGATTCAGTGGAGGTTCTTCTTCTGCTGCAGAAATCTATGCTAGAAAAACAATGGAAT
CTTTCAGCTGAGAAAACATTGGCAGCTTTTCCACCAAATGAAAAGAACTGTAAAAAGAAG
ATGCAGATCACTTGTTCAGGGACTTCTGCTAGGCGGAGGAGAATGGATACTCGTAAAAGG
GTTCAAATTCCAAAAACTTCAGCTGCAGCAAATAGTGCAAGCAAGCGACTGAGATCTGTT
GTCGGTCCAGAGCTACAACAAAACCGTTTGAGAGGTTACATGAAAGGTGTCGTAAACCAA
GAACTGCTTACACATAAGGAAGTGGTGCAACTATCCAAGAAAATCAAATTTGGTCTTTAC
TTAGAAGAACAGAAGGCCAGTCTGAAGGAAAGATTGGGATGTGAACCTTCTGACGATCAA
CTCGCGGTTTCCTTGAAGATGTCTCTTGCTGATTTACGATCTACATTAATGGAGTGTTCC
TTGGCTAGAGAAAAACTTGCAATGAGCAATGTTCGTCTCGTCATGTCAATTGCACAAAGA
TATGATAGCATGGGTACTGAAATGGCTGACCTCATTCAGGGGGGCCTTATTGGACTACTT
CGTGGGATAGAGAAATTTGATCACTCAAGAGGATTCAAAATCTCAACTTATGTTTATTGG
TGGATTCGTCAGGGCGTCTCCCGAGCATTAGTTGATAACTCAAGAACCTTAAGATTGCCC
ATACATCTACATGAAAGACTGAGTTTGATCCGTAATGCAAAAGTCAAGCTTAAAGATAAT
GGAATAACTCCATCAATCGAAAAAATAGCTGAATGCCTTAACATGTCCCAGAAGAAAGTC
AGGAATGCAACTGAGGCAAGCAGCAAGGTGTTTTCACTTGATAGGGAAGCATATCCCTCT
TTAAATGGCCTTCCTGGAGCAACACTTCATAGCTACATTGCTGATAATCGCCTGGAGAAC
AACCCGTGGCATGGAGTTGATGGATGGGCGCTCAAGGATGAAGTAAACAACCTCATTTCT
TCAACTCTTAGGGAACGCGAGAGAGATATTGTCCGACTGTACTATGGTCTGGACAATGAG
TGCCTTACCTGGGAGGATATTAGTAGAAGGATAGGTTTGTCCAGAGAAAGAGTGAGGCAG
GTTGGATTAGTTGCACTTGAGAAATTAAAACATGCTGCCAGGAAAAAGCAATTAGATGCA
ATGTTGGTTAAACATTGA