Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400069511
CDS Infomation

pacid=37449967 polypeptide=PGSC0003DMP400046923 locus=PGSC0003DMG402027023 ID=PGSC0003DMT400069511.v4.03 annot-version=v4.03
Sequence

ATGACTGTACCTCCGGTGGGCAATCAGGTGGAAGTTCCACCGTTGAATACTTTACCGATT
GGATATCGTTTTCGGCCCACGGATGAGGAGCTTATCAATCATTATTTGTGCTTGAAGATC
AATGGTTGTCATAACCAAGTGGATGTTATTCGTGAAATTGATATCTGCAAATTCGAGCCC
TGGGATTTGCCTGATTTGTCTGTTGTAGAGTCAAATGACAATGAGTGGTTGTACTTCTGC
CCGATAGACAGGAAGTACCAAAATGGGCAGCGATTGAACCGAGCAACAGAACGAGGATAC
TGGAAAGCTACTGGTAAAGATAGAAACATAGCTACTAGAAAGGGGGCAAAGATTGGGATG
AAGAAGACTTTGGTATACTATATTGGGCGAGCTCCTGAAGGGAAGAGGACCAATTGGGTG
ATCCATGAATATCGTGCAACTGACAAGTCATTGGATGGTTCACACCCTGGACAGGGAGCT
TTTGTGCTTTGTCGTCTCTTTAAGAAGAATGAATTGAAGCAAGATGAAAATGTCGAAAGT
TCACACTTTGATGAAGTTGAACAGCTTGTTTCTTCTCCTGCTGTTGGAAAATCACCAACC
AATGATGGATTATCAGCAGTGGCTCTATCTCCAATCATGGAAAGTGAGAGTAACAGAAGT
AACCCACCAAAAACCTCTGGAGGCAAAACTCATGACACAAGATTATCTATTAATAGTTGT
GGCAATAGTTGCACTGCTGGTGATGCTGAAGATCTGATGTTGGACATAACATCAGGACAA
TCAGATCTCCAGATAGAGGAACTGTTGGGACTCTTTCGTGACCCTTCACCAGAGCCTATT
GATTGGTCTCCGTTGCATTCACAGTCGCAGGTGGAGTTTGGATCTTCTATCTCACATGGT
ACCATGACCAATGAGATAAGCTCTGATCAAAAGGATGTCCAATGTCAGAATGGAATAAAT
GATCTCAATACTAGTGAGTTTTTAAATTCAATTCTTGTCAGCTCTGATGAGCTTTCCTAT
GAAGATTCTGAAGCGGAATTGAGGTCAATCTGGTTTGCCTCGAACAGTATTAACACTATA
ACAAGGGCACCAGTTAAGGACTCTGGAACGTGTAGTGTGTTGAAGTCACAAGTCACACAA
GAGCCAGTTAGGAGAGATTTTTTTGAACCCGAGCTGCTGTTGGGAAATTATGGAGAGACT
GCAGTAATGAGAGAGGTTAATTCTGTTGCAACCACAGTGGACGAGGCGTTTGCAACACCT
TATGTTCGCAATGATCATTCAATGGCGAATCTGGATTTCCTTAACAATGGTTACCCTGGA
GAGGTCATTTTGTCTGCTGGTTCTGGTGGAATGCAGGTCGACAGCTCACTAAACTTTGAT
GAATCAAACGGTTATAGCAATGTAGGCACTGATTCTGCTTTTGGAATAACACGAAGGACT
CGGCAGGTGCAGAATCAACCTGACGACAGCCAGCTGGGATCTGGAATGCAAGGAACTACT
GTTAGAAGAATACGTTACCAAGTGAAACTTCAAGCTGGAAGAGTAGAGTGTCGCATGCCG
ACTGATTCTGATCAGGGTGGAGCAGATCATGAAGGACTGTCAACTGTATCTGAGAGTGAA
AAGTTCTTCAATGAAGAAGCTTCTACTCCGAGTGCTGCTATCTGCAGCGATGAGACACAA
GATACCATGTGCAAAGAATTTAAAGGGGATTGTCAAATGGCTGAAGACTTGAGTGCAAAT
GTGAAAGATACAAATGGTTCAAAGAGAGCAGCATTGTCTTCGTTTTCATCAAGTTTCTAC
ATATCCAAGGTGCTCGCGGTTGCAAGTTTACTCATGGTCTTCTTAGGTGTTTTGGGATGC
TTTAAGCTGAGACAATCTGCATCCAAATTGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400046923
PEP Infomation

pacid=37449967 transcript=PGSC0003DMT400069511 locus=PGSC0003DMG402027023 ID=PGSC0003DMT400069511.v4.03 annot-version=v4.03
Sequence

MTVPPVGNQVEVPPLNTLPIGYRFRPTDEELINHYLCLKINGCHNQVDVIREIDICKFEP
WDLPDLSVVESNDNEWLYFCPIDRKYQNGQRLNRATERGYWKATGKDRNIATRKGAKIGM
KKTLVYYIGRAPEGKRTNWVIHEYRATDKSLDGSHPGQGAFVLCRLFKKNELKQDENVES
SHFDEVEQLVSSPAVGKSPTNDGLSAVALSPIMESESNRSNPPKTSGGKTHDTRLSINSC
GNSCTAGDAEDLMLDITSGQSDLQIEELLGLFRDPSPEPIDWSPLHSQSQVEFGSSISHG
TMTNEISSDQKDVQCQNGINDLNTSEFLNSILVSSDELSYEDSEAELRSIWFASNSINTI
TRAPVKDSGTCSVLKSQVTQEPVRRDFFEPELLLGNYGETAVMREVNSVATTVDEAFATP
YVRNDHSMANLDFLNNGYPGEVILSAGSGGMQVDSSLNFDESNGYSNVGTDSAFGITRRT
RQVQNQPDDSQLGSGMQGTTVRRIRYQVKLQAGRVECRMPTDSDQGGADHEGLSTVSESE
KFFNEEASTPSAAICSDETQDTMCKEFKGDCQMAEDLSANVKDTNGSKRAALSSFSSSFY
ISKVLAVASLLMVFLGVLGCFKLRQSASKL*

Transcript Sequence

Transcript ID

PGSC0003DMT400069511
Transcript Infomation

pacid=37449967 locus=PGSC0003DMG402027023 ID=PGSC0003DMT400069511.v4.03 annot-version=v4.03
Sequence

ATGACTGTACCTCCGGTGGGCAATCAGGTGGAAGTTCCACCGTTGAATACTTTACCGATT
GGATATCGTTTTCGGCCCACGGATGAGGAGCTTATCAATCATTATTTGTGCTTGAAGATC
AATGGTTGTCATAACCAAGTGGATGTTATTCGTGAAATTGATATCTGCAAATTCGAGCCC
TGGGATTTGCCTGATTTGTCTGTTGTAGAGTCAAATGACAATGAGTGGTTGTACTTCTGC
CCGATAGACAGGAAGTACCAAAATGGGCAGCGATTGAACCGAGCAACAGAACGAGGATAC
TGGAAAGCTACTGGTAAAGATAGAAACATAGCTACTAGAAAGGGGGCAAAGATTGGGATG
AAGAAGACTTTGGTATACTATATTGGGCGAGCTCCTGAAGGGAAGAGGACCAATTGGGTG
ATCCATGAATATCGTGCAACTGACAAGTCATTGGATGGTTCACACCCTGGACAGGGAGCT
TTTGTGCTTTGTCGTCTCTTTAAGAAGAATGAATTGAAGCAAGATGAAAATGTCGAAAGT
TCACACTTTGATGAAGTTGAACAGCTTGTTTCTTCTCCTGCTGTTGGAAAATCACCAACC
AATGATGGATTATCAGCAGTGGCTCTATCTCCAATCATGGAAAGTGAGAGTAACAGAAGT
AACCCACCAAAAACCTCTGGAGGCAAAACTCATGACACAAGATTATCTATTAATAGTTGT
GGCAATAGTTGCACTGCTGGTGATGCTGAAGATCTGATGTTGGACATAACATCAGGACAA
TCAGATCTCCAGATAGAGGAACTGTTGGGACTCTTTCGTGACCCTTCACCAGAGCCTATT
GATTGGTCTCCGTTGCATTCACAGTCGCAGGTGGAGTTTGGATCTTCTATCTCACATGGT
ACCATGACCAATGAGATAAGCTCTGATCAAAAGGATGTCCAATGTCAGAATGGAATAAAT
GATCTCAATACTAGTGAGTTTTTAAATTCAATTCTTGTCAGCTCTGATGAGCTTTCCTAT
GAAGATTCTGAAGCGGAATTGAGGTCAATCTGGTTTGCCTCGAACAGTATTAACACTATA
ACAAGGGCACCAGTTAAGGACTCTGGAACGTGTAGTGTGTTGAAGTCACAAGTCACACAA
GAGCCAGTTAGGAGAGATTTTTTTGAACCCGAGCTGCTGTTGGGAAATTATGGAGAGACT
GCAGTAATGAGAGAGGTTAATTCTGTTGCAACCACAGTGGACGAGGCGTTTGCAACACCT
TATGTTCGCAATGATCATTCAATGGCGAATCTGGATTTCCTTAACAATGGTTACCCTGGA
GAGGTCATTTTGTCTGCTGGTTCTGGTGGAATGCAGGTCGACAGCTCACTAAACTTTGAT
GAATCAAACGGTTATAGCAATGTAGGCACTGATTCTGCTTTTGGAATAACACGAAGGACT
CGGCAGGTGCAGAATCAACCTGACGACAGCCAGCTGGGATCTGGAATGCAAGGAACTACT
GTTAGAAGAATACGTTACCAAGTGAAACTTCAAGCTGGAAGAGTAGAGTGTCGCATGCCG
ACTGATTCTGATCAGGGTGGAGCAGATCATGAAGGACTGTCAACTGTATCTGAGAGTGAA
AAGTTCTTCAATGAAGAAGCTTCTACTCCGAGTGCTGCTATCTGCAGCGATGAGACACAA
GATACCATGTGCAAAGAATTTAAAGGGGATTGTCAAATGGCTGAAGACTTGAGTGCAAAT
GTGAAAGATACAAATGGTTCAAAGAGAGCAGCATTGTCTTCGTTTTCATCAAGTTTCTAC
ATATCCAAGGTGCTCGCGGTTGCAAGTTTACTCATGGTCTTCTTAGGTGTTTTGGGATGC
TTTAAGCTGAGACAATCTGCATCCAAATTGTAG