Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400069509
CDS Infomation

pacid=37451586 polypeptide=PGSC0003DMP400046921 locus=PGSC0003DMG401027023 ID=PGSC0003DMT400069509.v4.03 annot-version=v4.03
Sequence

ATGTTCACATTTTCTCCAATTTTAGTACTCCTATTGCTTTTCTGCTTCAGCTTACTGTAT
TCAGTTCAAGGCAGCTACTTTGATCAAGAATTTGTTAAGCAGATACTGAGTTCAGCAAGT
AAAGATAAAGATTGGTTAGTATCCATAAGAAGGAAAATTCATGAATACCCAGAACTCAGA
TTCGAAGAATATAATACCAGTGCTCTGATTCGTAGTGAACTTGATAAGCTTGGGGTTTAT
TATGAATACCCTTTTGCAAAAACTGGTATTGTTGCTCAAATTGGCAATGGTTCTCCCCCT
GTTGTTGCTTTGCGAGCTGATATGGATGCCCTTCCTCTGCAGGAACTTGTTGAATGGGAA
CATAAGAGCAAAATTAATGGCAAAATGCATGGATGTGGACATGATGCTCATACGACAATG
CTTCTTGGTGCTGCTAAGCTGCTGAATGAACGGAAGGACAAACTTAATGGAACCGTCAGA
CTTGTTTTCCAACCTGCGGAGGAAGGAGGAGCTGGTGCAAATCATATGATAAAGGAAGGA
GCTCTAGGTGATGCAGAAGTTATATTTGGTATGCATGTTGATTTTAAAAGACCTACAGGA
GGCATTGGCACTAGTCCTGGACCCCTTTTAGCTGCCGTTTGCTTCTTTGAAGCAAGAGTA
GAAGGAAAAGGTGGGCATGCTGCACAACCCCATGAAGCTGTGGATCCAATACTTGCTGCA
TCATTTGCAATTGTGGCATTGCAGCAGCTCATCTCAAGAGAAGTAGATCCCCTTCATAGT
CAAGTTCTTTCTGTTACTTATGTCAGAGGTGGATCAGCATCAAATGTAATTCCATCATAT
GTTGAATTTGGGGGAACTCTGAGGAGTCTAACAACTGAAGGCTTGTCTCAACTTCAAAAG
AGGGTGAAAGAGGTAATTGAAGGACAGGCAGCTGTGCATAGGTGTAAGGCGTACGTTGAC
ATGAAACAGGAGGATTTCCCAGCATATCCAGCTTGCACAAATGATGAGAACTTACATCAA
CATGTAGAGAGGGTTGGCAAACTCGTGCTTGGTTCGGAGAACGTTGGGGAAATTGAAAAG
GTCATGGCAGGTGAGGACTTTGCCTTCTATCAACAAGTGATTCCTGGAGTCATCTTTCAA
ATAGGGATCAGAAATGAAAAGTTGGGCTCTACCCACGCCCCACATTCCCCTCACTTCTTT
CTTGACGAGGATGTCCTTCCAATTGGAGCAGCAATGCACACAGCCATAGCAGAGATGTAT
CTGAACGATTACCAACATCCCACTGCAGTTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400046921
PEP Infomation

pacid=37451586 transcript=PGSC0003DMT400069509 locus=PGSC0003DMG401027023 ID=PGSC0003DMT400069509.v4.03 annot-version=v4.03
Sequence

MFTFSPILVLLLLFCFSLLYSVQGSYFDQEFVKQILSSASKDKDWLVSIRRKIHEYPELR
FEEYNTSALIRSELDKLGVYYEYPFAKTGIVAQIGNGSPPVVALRADMDALPLQELVEWE
HKSKINGKMHGCGHDAHTTMLLGAAKLLNERKDKLNGTVRLVFQPAEEGGAGANHMIKEG
ALGDAEVIFGMHVDFKRPTGGIGTSPGPLLAAVCFFEARVEGKGGHAAQPHEAVDPILAA
SFAIVALQQLISREVDPLHSQVLSVTYVRGGSASNVIPSYVEFGGTLRSLTTEGLSQLQK
RVKEVIEGQAAVHRCKAYVDMKQEDFPAYPACTNDENLHQHVERVGKLVLGSENVGEIEK
VMAGEDFAFYQQVIPGVIFQIGIRNEKLGSTHAPHSPHFFLDEDVLPIGAAMHTAIAEMY
LNDYQHPTAV*

Transcript Sequence

Transcript ID

PGSC0003DMT400069509
Transcript Infomation

pacid=37451586 locus=PGSC0003DMG401027023 ID=PGSC0003DMT400069509.v4.03 annot-version=v4.03
Sequence

ATGTTCACATTTTCTCCAATTTTAGTACTCCTATTGCTTTTCTGCTTCAGCTTACTGTAT
TCAGTTCAAGGCAGCTACTTTGATCAAGAATTTGTTAAGCAGATACTGAGTTCAGCAAGT
AAAGATAAAGATTGGTTAGTATCCATAAGAAGGAAAATTCATGAATACCCAGAACTCAGA
TTCGAAGAATATAATACCAGTGCTCTGATTCGTAGTGAACTTGATAAGCTTGGGGTTTAT
TATGAATACCCTTTTGCAAAAACTGGTATTGTTGCTCAAATTGGCAATGGTTCTCCCCCT
GTTGTTGCTTTGCGAGCTGATATGGATGCCCTTCCTCTGCAGGAACTTGTTGAATGGGAA
CATAAGAGCAAAATTAATGGCAAAATGCATGGATGTGGACATGATGCTCATACGACAATG
CTTCTTGGTGCTGCTAAGCTGCTGAATGAACGGAAGGACAAACTTAATGGAACCGTCAGA
CTTGTTTTCCAACCTGCGGAGGAAGGAGGAGCTGGTGCAAATCATATGATAAAGGAAGGA
GCTCTAGGTGATGCAGAAGTTATATTTGGTATGCATGTTGATTTTAAAAGACCTACAGGA
GGCATTGGCACTAGTCCTGGACCCCTTTTAGCTGCCGTTTGCTTCTTTGAAGCAAGAGTA
GAAGGAAAAGGTGGGCATGCTGCACAACCCCATGAAGCTGTGGATCCAATACTTGCTGCA
TCATTTGCAATTGTGGCATTGCAGCAGCTCATCTCAAGAGAAGTAGATCCCCTTCATAGT
CAAGTTCTTTCTGTTACTTATGTCAGAGGTGGATCAGCATCAAATGTAATTCCATCATAT
GTTGAATTTGGGGGAACTCTGAGGAGTCTAACAACTGAAGGCTTGTCTCAACTTCAAAAG
AGGGTGAAAGAGGTAATTGAAGGACAGGCAGCTGTGCATAGGTGTAAGGCGTACGTTGAC
ATGAAACAGGAGGATTTCCCAGCATATCCAGCTTGCACAAATGATGAGAACTTACATCAA
CATGTAGAGAGGGTTGGCAAACTCGTGCTTGGTTCGGAGAACGTTGGGGAAATTGAAAAG
GTCATGGCAGGTGAGGACTTTGCCTTCTATCAACAAGTGATTCCTGGAGTCATCTTTCAA
ATAGGGATCAGAAATGAAAAGTTGGGCTCTACCCACGCCCCACATTCCCCTCACTTCTTT
CTTGACGAGGATGTCCTTCCAATTGGAGCAGCAATGCACACAGCCATAGCAGAGATGTAT
CTGAACGATTACCAACATCCCACTGCAGTTTAG