Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400069501
CDS Infomation

pacid=37453750 polypeptide=PGSC0003DMP400046918 locus=PGSC0003DMG400027020 ID=PGSC0003DMT400069501.v4.03 annot-version=v4.03
Sequence

ATGGAGAAATTAGCAACATTGTTAGCATTACTATTATACTTTGGATTAGTTTTTGGAGAA
ATTAGTAACAAGTGTGTGTTTCCAGCAATATATAATTTTGGTGACTCGAATTCGGATACC
GGTGGAAAATCAGCAGCATTCCGTCAAGTGCCTCCACCCAATGGTCTGACTTTCTTCGGC
AGTCCCATGGGCAGAGTGTGCGATGGTCGTCTCATCATAGACCTCATAGCGGACAGGTTG
GAGTTACAGTACTTGAGTCCGTATTTAGATTCAGTAATGGCAAATTTTAGAAATGGTGCA
AACTTTGCAACAGCAGGTTCATCTATACTTCCTGGTGGTTATAGTCCTTTTAGCCTTGAG
GTTCAGATTTCTCAGTTTTTACAATTCAAAAAACGGACTATTTTGCTCTCTGATTTATCA
ATTCCAAATAACTCAAAATGGTCTTCAAAAGTCAACATTGCAAATCCACAAGATTTTTCA
AAGGCACTGTACACATTTGACATTGGACAGAATGACCTTTCTTATGGTTTTCAACATACC
CATGAAGCACAAGTCAGAGCATCCATTCCACTAATCATAGGCAATTTTACTCAAGCTATT
CATCAACTATACTATGAAGGGGCTGTGAATTTCTGGATCCACAATACTGGTCCCATTGGC
TGTTTGCCCTACAGTGTGATAGATTATCCATTGAAGCCTCAGGGCTTGGATGGCATTGGG
TGCATAGAGAACCAAAACAAGGTGGCTCGTGAGTTCAACGAGCAACTCAAGGACAGGATA
TTACACTTACGAGCAGAGCTTCCTCGTGCTGCATTTACTTATGTTGACATTTATTCAGCT
AAGTATCAACTAATTAGCTCTGCCAAGGAACAAGGGTTTGGAGACCCATTGAAATTTTGC
TGTGGATGGTACAACAATGGTTCTGAAGTTGCATGTGGACAGACAGCTATAGTGAATGGC
ACAGAGCATGGGAAGGCATGTAGTGATCCCACAAAGTACATTAGCTGGGATGGGATACAT
TACACAGATGCTGCAAATGTCTGGTTAGCCAAATCAATTCTCAATGGCTCTTTCTCAGAC
CCTCCAGTTCCTATTGAACAATCTTGCAGTCACTCATCCACCAGAGTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400046918
PEP Infomation

pacid=37453750 transcript=PGSC0003DMT400069501 locus=PGSC0003DMG400027020 ID=PGSC0003DMT400069501.v4.03 annot-version=v4.03
Sequence

MEKLATLLALLLYFGLVFGEISNKCVFPAIYNFGDSNSDTGGKSAAFRQVPPPNGLTFFG
SPMGRVCDGRLIIDLIADRLELQYLSPYLDSVMANFRNGANFATAGSSILPGGYSPFSLE
VQISQFLQFKKRTILLSDLSIPNNSKWSSKVNIANPQDFSKALYTFDIGQNDLSYGFQHT
HEAQVRASIPLIIGNFTQAIHQLYYEGAVNFWIHNTGPIGCLPYSVIDYPLKPQGLDGIG
CIENQNKVAREFNEQLKDRILHLRAELPRAAFTYVDIYSAKYQLISSAKEQGFGDPLKFC
CGWYNNGSEVACGQTAIVNGTEHGKACSDPTKYISWDGIHYTDAANVWLAKSILNGSFSD
PPVPIEQSCSHSSTRV*

Transcript Sequence

Transcript ID

PGSC0003DMT400069501
Transcript Infomation

pacid=37453750 locus=PGSC0003DMG400027020 ID=PGSC0003DMT400069501.v4.03 annot-version=v4.03
Sequence

ATGGAGAAATTAGCAACATTGTTAGCATTACTATTATACTTTGGATTAGTTTTTGGAGAA
ATTAGTAACAAGTGTGTGTTTCCAGCAATATATAATTTTGGTGACTCGAATTCGGATACC
GGTGGAAAATCAGCAGCATTCCGTCAAGTGCCTCCACCCAATGGTCTGACTTTCTTCGGC
AGTCCCATGGGCAGAGTGTGCGATGGTCGTCTCATCATAGACCTCATAGCGGACAGGTTG
GAGTTACAGTACTTGAGTCCGTATTTAGATTCAGTAATGGCAAATTTTAGAAATGGTGCA
AACTTTGCAACAGCAGGTTCATCTATACTTCCTGGTGGTTATAGTCCTTTTAGCCTTGAG
GTTCAGATTTCTCAGTTTTTACAATTCAAAAAACGGACTATTTTGCTCTCTGATTTATCA
ATTCCAAATAACTCAAAATGGTCTTCAAAAGTCAACATTGCAAATCCACAAGATTTTTCA
AAGGCACTGTACACATTTGACATTGGACAGAATGACCTTTCTTATGGTTTTCAACATACC
CATGAAGCACAAGTCAGAGCATCCATTCCACTAATCATAGGCAATTTTACTCAAGCTATT
CATCAACTATACTATGAAGGGGCTGTGAATTTCTGGATCCACAATACTGGTCCCATTGGC
TGTTTGCCCTACAGTGTGATAGATTATCCATTGAAGCCTCAGGGCTTGGATGGCATTGGG
TGCATAGAGAACCAAAACAAGGTGGCTCGTGAGTTCAACGAGCAACTCAAGGACAGGATA
TTACACTTACGAGCAGAGCTTCCTCGTGCTGCATTTACTTATGTTGACATTTATTCAGCT
AAGTATCAACTAATTAGCTCTGCCAAGGAACAAGGGTTTGGAGACCCATTGAAATTTTGC
TGTGGATGGTACAACAATGGTTCTGAAGTTGCATGTGGACAGACAGCTATAGTGAATGGC
ACAGAGCATGGGAAGGCATGTAGTGATCCCACAAAGTACATTAGCTGGGATGGGATACAT
TACACAGATGCTGCAAATGTCTGGTTAGCCAAATCAATTCTCAATGGCTCTTTCTCAGAC
CCTCCAGTTCCTATTGAACAATCTTGCAGTCACTCATCCACCAGAGTTTAA