Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400069467
CDS Infomation

pacid=37454196 polypeptide=PGSC0003DMP400046889 locus=PGSC0003DMG400027005 ID=PGSC0003DMT400069467.v4.03 annot-version=v4.03
Sequence

ATGTCTGAGATTCACAGCACCAACAACCTCACAAAGAAGGCTGGTCTCTATTTTCAAAAC
AATGTCCTATCTAGCTGGAACAAGACGATTAAAGCTCTCAAATCTGCAGAAATCATTCTT
CAACAAGCCGCGGATCTTTCCCTGGTTGATGCATGTGCTGAGTCTATTATCGCCAAGGTA
CTGCACAATCCACGTCTTCTTGGAGAGCCGATGAGGAATGTAACAACAACAGATGATGAC
AGTGAGAACGATGAAAATGCCTATAAGTCAAATGTCAAGAGGAGGCTTTTTGTTCATGAC
TGGAAATCAGAGGACTTAACACTACTTTCTATTGCCCTCTATGAGCCCATAATTCGTGCA
ATGGTTCATCGAGAAGTCCCTCTGGAATACGTGGCATCATCTCTGTTTCAGTATCTCAGC
AAATGGGTTTTTCTGGACACTAAAAGAGAAGATGATGATCCATCAACTTACGAGAGGAAT
TCTCAAAGAGTGATCATTGAGGCAGTGGAGAGACTGTTGCCTCAAAAAAGGGGGCTGATC
CCCAGTTCTTTGCTCTCTAAAATGCTGCAATCCGCGATAATCTTGGATGCTCATACTGAA
TGCAAAAGCGGATTAGAGACTAGAATAGGAAAGCAACTAGATCAGGCAACAGTCAAGGAC
CTCTTAATACCTGCACAAGGATATGCAAAAGAAGAGCAGTATGACACTGAAAGTGTGAAA
AGGATATTGAAGAATTTCTACAGCAATTACACAAGCACGGATATATCTGGCCTAGTTGTG
GTAGCAGAACTTGTCGATGACTTTTTGGCTGAGGTTTCTAGTGATATAGATTTGAAGTTG
AACACATTCTTATCACTAGCAGAGCTATCACAAGCAGCAACAGGAGGAACTAACAGAAAT
TCTGATGGAATGTATAGAGCAATTGATATATACTTGGACAAGCACAGATATCTCACAGAT
TGGGAAAGGGAGGAGGTTTGCAGGGTGTTGGATTGCAGCAAAATGTCTCCTGAAGCCTGT
GAGCATGCTGCAAAGAACGAAAAGCTACCAGTTCGAGTGACGGTGCAGATTCTGTTTTCT
GTGCAGCTGAAGTTGAAGGATAATGTGACCAAGAGAATACAACGGGGTCCTGATAACCGA
TTGTTGAAGCTGGAAGAAGACGAGGAAGATGCGAAGGGGACTAGCAACAGTGAAGAGGCA
ACGATGAAAGCAGAGATGGAAAAGATGGGAAACAAGGTGCTTGAGCTGGAGAAAGAATGT
CATATGATGAGAAGGGAAATTCAGAGAGGTAGTTACCAGCACAAGATTCAAAAGGAAAAA
ACAAGCATGTGGAAAGAAATGAAGAGGAAGATAGGTTGTATGACAAGTTTGCAAGAGACA
AATTGCCATGTGAAGAAGAAAAAAGTCCATCCAAGATAG

Peptide Sequence

PEP ID

PGSC0003DMP400046889
PEP Infomation

pacid=37454196 transcript=PGSC0003DMT400069467 locus=PGSC0003DMG400027005 ID=PGSC0003DMT400069467.v4.03 annot-version=v4.03
Sequence

MSEIHSTNNLTKKAGLYFQNNVLSSWNKTIKALKSAEIILQQAADLSLVDACAESIIAKV
LHNPRLLGEPMRNVTTTDDDSENDENAYKSNVKRRLFVHDWKSEDLTLLSIALYEPIIRA
MVHREVPLEYVASSLFQYLSKWVFLDTKREDDDPSTYERNSQRVIIEAVERLLPQKRGLI
PSSLLSKMLQSAIILDAHTECKSGLETRIGKQLDQATVKDLLIPAQGYAKEEQYDTESVK
RILKNFYSNYTSTDISGLVVVAELVDDFLAEVSSDIDLKLNTFLSLAELSQAATGGTNRN
SDGMYRAIDIYLDKHRYLTDWEREEVCRVLDCSKMSPEACEHAAKNEKLPVRVTVQILFS
VQLKLKDNVTKRIQRGPDNRLLKLEEDEEDAKGTSNSEEATMKAEMEKMGNKVLELEKEC
HMMRREIQRGSYQHKIQKEKTSMWKEMKRKIGCMTSLQETNCHVKKKKVHPR*

Transcript Sequence

Transcript ID

PGSC0003DMT400069467
Transcript Infomation

pacid=37454196 locus=PGSC0003DMG400027005 ID=PGSC0003DMT400069467.v4.03 annot-version=v4.03
Sequence

ATGTCTGAGATTCACAGCACCAACAACCTCACAAAGAAGGCTGGTCTCTATTTTCAAAAC
AATGTCCTATCTAGCTGGAACAAGACGATTAAAGCTCTCAAATCTGCAGAAATCATTCTT
CAACAAGCCGCGGATCTTTCCCTGGTTGATGCATGTGCTGAGTCTATTATCGCCAAGGTA
CTGCACAATCCACGTCTTCTTGGAGAGCCGATGAGGAATGTAACAACAACAGATGATGAC
AGTGAGAACGATGAAAATGCCTATAAGTCAAATGTCAAGAGGAGGCTTTTTGTTCATGAC
TGGAAATCAGAGGACTTAACACTACTTTCTATTGCCCTCTATGAGCCCATAATTCGTGCA
ATGGTTCATCGAGAAGTCCCTCTGGAATACGTGGCATCATCTCTGTTTCAGTATCTCAGC
AAATGGGTTTTTCTGGACACTAAAAGAGAAGATGATGATCCATCAACTTACGAGAGGAAT
TCTCAAAGAGTGATCATTGAGGCAGTGGAGAGACTGTTGCCTCAAAAAAGGGGGCTGATC
CCCAGTTCTTTGCTCTCTAAAATGCTGCAATCCGCGATAATCTTGGATGCTCATACTGAA
TGCAAAAGCGGATTAGAGACTAGAATAGGAAAGCAACTAGATCAGGCAACAGTCAAGGAC
CTCTTAATACCTGCACAAGGATATGCAAAAGAAGAGCAGTATGACACTGAAAGTGTGAAA
AGGATATTGAAGAATTTCTACAGCAATTACACAAGCACGGATATATCTGGCCTAGTTGTG
GTAGCAGAACTTGTCGATGACTTTTTGGCTGAGGTTTCTAGTGATATAGATTTGAAGTTG
AACACATTCTTATCACTAGCAGAGCTATCACAAGCAGCAACAGGAGGAACTAACAGAAAT
TCTGATGGAATGTATAGAGCAATTGATATATACTTGGACAAGCACAGATATCTCACAGAT
TGGGAAAGGGAGGAGGTTTGCAGGGTGTTGGATTGCAGCAAAATGTCTCCTGAAGCCTGT
GAGCATGCTGCAAAGAACGAAAAGCTACCAGTTCGAGTGACGGTGCAGATTCTGTTTTCT
GTGCAGCTGAAGTTGAAGGATAATGTGACCAAGAGAATACAACGGGGTCCTGATAACCGA
TTGTTGAAGCTGGAAGAAGACGAGGAAGATGCGAAGGGGACTAGCAACAGTGAAGAGGCA
ACGATGAAAGCAGAGATGGAAAAGATGGGAAACAAGGTGCTTGAGCTGGAGAAAGAATGT
CATATGATGAGAAGGGAAATTCAGAGAGGTAGTTACCAGCACAAGATTCAAAAGGAAAAA
ACAAGCATGTGGAAAGAAATGAAGAGGAAGATAGGTTGTATGACAAGTTTGCAAGAGACA
AATTGCCATGTGAAGAAGAAAAAAGTCCATCCAAGATAG