Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400069461
CDS Infomation

pacid=37452342 polypeptide=PGSC0003DMP400046884 locus=PGSC0003DMG400027002 ID=PGSC0003DMT400069461.v4.03 annot-version=v4.03
Sequence

ATGGCTGAAGAAGAGAATGGTGGATCCACAGAGGCTCTGCCCCCTCCTCCCCCTGTTCCA
CTTGATTTCTCTCCAGCACAAGCTGAACCAGAGCCGGTGAAGAAAAAGGTTTTACGTGTT
CCCATGGCGAGACGTGGCCTTGGAAGCAAGGGACAAAAGATCCCGATCCTTACCAATCAC
TTTAAAGTGAACGTGTCTAATGTTGATGGACACTTCTTTCATTACAGTGTTGCCCTATTT
TATGAGGATGGTCGACCTGTCGAGGGAAAAGGAATTGGCAGAAAAGTTCTGGATAGAGTG
CATGAAACATATGATACAGAATTGGCCGGGAAGGATTTTGCATATGATGGGGAGAAGAGT
TTGTTCACCATTGGTTCACTACCTAGAAATAAATTAGAGTTCACGGTTGTACTAGATGAC
ATAACATCTAATCGGAACAACGGGACCAATGGCAACTCCAGCCCTGGCAGACATGGAAGC
CCTCCTAATGAAACTGATAGGAAAAGATTAAGGCGGCCGTACCAATCTAAAACTTATAAG
GTGGAGATTAGCTTCGCTGCCAAGATTCCAATGCAGGCGATTGCAAATGCTTTGCGAGGT
CAAGAGTCTGAGAACTCTCAAGAAGCCTTGCGAGTTTTGGATATAATTTTAAGGCAGCAT
GCTGCAAAACAGGGTTGTTTACTTGTTCGGCAATCCTTTTTCCATAATGACCCAAAGAAC
TTTGCTGATGTTGGAGGTGGTGTTCTTGGCTGCCGAGGGTTCCATTCGAGTTTTCGAACC
ACCCAGTCGGGATTGTCTTTGAACATTGACGTGTCTACCACAATGATAATCCAGCCTGGG
CCTGTGGTTGACTTTCTGATAGCGAACCAAAATGCAAAAGATCCCTTTTCACTTGATTGG
GCGAAGGCAAAGCGCGTATTGAAGAACCTGAGAGTGAAGACTGCTCCCGCTAACCAAGAA
TTCAAAATAACTGGATTGAGCGAAAAACCTTGTCGTGAGCAGACGTTTACTCTAAAGCAG
AGGAGCAAAGATGAGGATGGTGAAGTGCAGACTTCAGAAGTGACAGTTTATGATTACTTT
GTTAATCATCGTAACATAGACTTGCGATATTCTGCTGATTTGCCGTGCCTCAATGTTGGA
AAGCCTAAACGTCCCACCTATTTCCCCATTGAGCTCTGCACTTTGGTCTCATTGCAAAGG
TACACAAAAGCCTTGTCCACCTTTCAGAGGGCTTCCTTGGTGGAGAAGTCTAGGCAAAAG
CCTCAGGAGAGAATGGAAATTTTGAGTAATGCTCTCAAAATCAACAATTATGATGCTGAG
CCTCTGCTTCGTTCTTGTGGCGTCTCAATCAGTAGCAACTTCACACAGGTTGAAGGGCGT
GTGCTGCCTGCTCCTAAGTTGAAGGCAGGAAATGGAGATGACCTTTTCACCCGAAATGGC
AGGTGGAACTTTAATAATAAGAGATTCTTTGATCCAGCAAAGGTAGAGCGTTGGGCTGTT
GTGAACTTTTCTGCACGCTGTGACCTCCGTGGCCTAGTCAGAGATTTGACAAGACTTGGA
GAGACTAAAGGAATTAGTGTGGAAGCTCCATTTGAAGTGTTTGAAGAGTCTCCACAGCTT
AGAAGGGCTCCACCTGTTGTCAGAGTTGACAAAATGTTTGAAGAGATCCAGTCAAAACTT
CCTGGTGCCCCGAAGTTTCTTCTCTGTCTTCTTCCTGAGAGGAAAAATTGTGACATATAT
GGACCATGGAAGCGGAAAAATCTGGCTGATCATGGTATAGTAACCCAATGCTTGGCTCCT
GGAAGAGTTAATGATCAGTATCTCACAAACCTTCTCCTTAAGATCAATGCTAAGCTCGGT
GGTTTAAATTCTATGTTAGCTGCGGAAGTTTCTCCTTCCATCCCCATGGTATCTAAGGTC
CCCACCATGATTCTTGGAATGGACGTATCACATGGCTCTCCCGGCCAGTCTGATGTACCA
TCAATTGCTGCAGTTGTGAGTTCAAGGCAGTGGCCGTCAATATCTCGTTATAGAGCTTCC
GTGCGCACTCAATCTCCTAAAGTAGAGATGATTGATAACATATTTAAAAAAATTTCAGAC
ACTGAGGATGATGGGATTATGAGGGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAA
AGGAAGCCTGAGCACATTATAGTATTCAGGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400046884
PEP Infomation

pacid=37452342 transcript=PGSC0003DMT400069461 locus=PGSC0003DMG400027002 ID=PGSC0003DMT400069461.v4.03 annot-version=v4.03
Sequence

MAEEENGGSTEALPPPPPVPLDFSPAQAEPEPVKKKVLRVPMARRGLGSKGQKIPILTNH
FKVNVSNVDGHFFHYSVALFYEDGRPVEGKGIGRKVLDRVHETYDTELAGKDFAYDGEKS
LFTIGSLPRNKLEFTVVLDDITSNRNNGTNGNSSPGRHGSPPNETDRKRLRRPYQSKTYK
VEISFAAKIPMQAIANALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHNDPKN
FADVGGGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIIQPGPVVDFLIANQNAKDPFSLDW
AKAKRVLKNLRVKTAPANQEFKITGLSEKPCREQTFTLKQRSKDEDGEVQTSEVTVYDYF
VNHRNIDLRYSADLPCLNVGKPKRPTYFPIELCTLVSLQRYTKALSTFQRASLVEKSRQK
PQERMEILSNALKINNYDAEPLLRSCGVSISSNFTQVEGRVLPAPKLKAGNGDDLFTRNG
RWNFNNKRFFDPAKVERWAVVNFSARCDLRGLVRDLTRLGETKGISVEAPFEVFEESPQL
RRAPPVVRVDKMFEEIQSKLPGAPKFLLCLLPERKNCDIYGPWKRKNLADHGIVTQCLAP
GRVNDQYLTNLLLKINAKLGGLNSMLAAEVSPSIPMVSKVPTMILGMDVSHGSPGQSDVP
SIAAVVSSRQWPSISRYRASVRTQSPKVEMIDNIFKKISDTEDDGIMRELLLDFYVSSGK
RKPEHIIVFR*

Transcript Sequence

Transcript ID

PGSC0003DMT400069461
Transcript Infomation

pacid=37452342 locus=PGSC0003DMG400027002 ID=PGSC0003DMT400069461.v4.03 annot-version=v4.03
Sequence

ATGGCTGAAGAAGAGAATGGTGGATCCACAGAGGCTCTGCCCCCTCCTCCCCCTGTTCCA
CTTGATTTCTCTCCAGCACAAGCTGAACCAGAGCCGGTGAAGAAAAAGGTTTTACGTGTT
CCCATGGCGAGACGTGGCCTTGGAAGCAAGGGACAAAAGATCCCGATCCTTACCAATCAC
TTTAAAGTGAACGTGTCTAATGTTGATGGACACTTCTTTCATTACAGTGTTGCCCTATTT
TATGAGGATGGTCGACCTGTCGAGGGAAAAGGAATTGGCAGAAAAGTTCTGGATAGAGTG
CATGAAACATATGATACAGAATTGGCCGGGAAGGATTTTGCATATGATGGGGAGAAGAGT
TTGTTCACCATTGGTTCACTACCTAGAAATAAATTAGAGTTCACGGTTGTACTAGATGAC
ATAACATCTAATCGGAACAACGGGACCAATGGCAACTCCAGCCCTGGCAGACATGGAAGC
CCTCCTAATGAAACTGATAGGAAAAGATTAAGGCGGCCGTACCAATCTAAAACTTATAAG
GTGGAGATTAGCTTCGCTGCCAAGATTCCAATGCAGGCGATTGCAAATGCTTTGCGAGGT
CAAGAGTCTGAGAACTCTCAAGAAGCCTTGCGAGTTTTGGATATAATTTTAAGGCAGCAT
GCTGCAAAACAGGGTTGTTTACTTGTTCGGCAATCCTTTTTCCATAATGACCCAAAGAAC
TTTGCTGATGTTGGAGGTGGTGTTCTTGGCTGCCGAGGGTTCCATTCGAGTTTTCGAACC
ACCCAGTCGGGATTGTCTTTGAACATTGACGTGTCTACCACAATGATAATCCAGCCTGGG
CCTGTGGTTGACTTTCTGATAGCGAACCAAAATGCAAAAGATCCCTTTTCACTTGATTGG
GCGAAGGCAAAGCGCGTATTGAAGAACCTGAGAGTGAAGACTGCTCCCGCTAACCAAGAA
TTCAAAATAACTGGATTGAGCGAAAAACCTTGTCGTGAGCAGACGTTTACTCTAAAGCAG
AGGAGCAAAGATGAGGATGGTGAAGTGCAGACTTCAGAAGTGACAGTTTATGATTACTTT
GTTAATCATCGTAACATAGACTTGCGATATTCTGCTGATTTGCCGTGCCTCAATGTTGGA
AAGCCTAAACGTCCCACCTATTTCCCCATTGAGCTCTGCACTTTGGTCTCATTGCAAAGG
TACACAAAAGCCTTGTCCACCTTTCAGAGGGCTTCCTTGGTGGAGAAGTCTAGGCAAAAG
CCTCAGGAGAGAATGGAAATTTTGAGTAATGCTCTCAAAATCAACAATTATGATGCTGAG
CCTCTGCTTCGTTCTTGTGGCGTCTCAATCAGTAGCAACTTCACACAGGTTGAAGGGCGT
GTGCTGCCTGCTCCTAAGTTGAAGGCAGGAAATGGAGATGACCTTTTCACCCGAAATGGC
AGGTGGAACTTTAATAATAAGAGATTCTTTGATCCAGCAAAGGTAGAGCGTTGGGCTGTT
GTGAACTTTTCTGCACGCTGTGACCTCCGTGGCCTAGTCAGAGATTTGACAAGACTTGGA
GAGACTAAAGGAATTAGTGTGGAAGCTCCATTTGAAGTGTTTGAAGAGTCTCCACAGCTT
AGAAGGGCTCCACCTGTTGTCAGAGTTGACAAAATGTTTGAAGAGATCCAGTCAAAACTT
CCTGGTGCCCCGAAGTTTCTTCTCTGTCTTCTTCCTGAGAGGAAAAATTGTGACATATAT
GGACCATGGAAGCGGAAAAATCTGGCTGATCATGGTATAGTAACCCAATGCTTGGCTCCT
GGAAGAGTTAATGATCAGTATCTCACAAACCTTCTCCTTAAGATCAATGCTAAGCTCGGT
GGTTTAAATTCTATGTTAGCTGCGGAAGTTTCTCCTTCCATCCCCATGGTATCTAAGGTC
CCCACCATGATTCTTGGAATGGACGTATCACATGGCTCTCCCGGCCAGTCTGATGTACCA
TCAATTGCTGCAGTTGTGAGTTCAAGGCAGTGGCCGTCAATATCTCGTTATAGAGCTTCC
GTGCGCACTCAATCTCCTAAAGTAGAGATGATTGATAACATATTTAAAAAAATTTCAGAC
ACTGAGGATGATGGGATTATGAGGGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAA
AGGAAGCCTGAGCACATTATAGTATTCAGGTGA